RNA–Protein interactions for RNA: ENST00000551160.5

BEST3-210, Transcript of bestrophin 3, humanhuman

TSL 3 BASIC

Gene BEST3, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-210ENST00000551160 EXOC8Q8IYI6 725 aa11.34□□□□□ -0.59
BEST3-210ENST00000551160 RASEFQ8IZ41 740 aa11.34□□□□□ -0.59
BEST3-210ENST00000551160 IRF7Q92985 503 aa11.34□□□□□ -0.59
BEST3-210ENST00000551160 ASB16Q96NS5 453 aa11.34□□□□□ -0.59
BEST3-210ENST00000551160 CORO1BQ9BR76 489 aa11.34□□□□□ -0.59
BEST3-210ENST00000551160 SLC26A6Q9BXS9 759 aa11.34□□□□□ -0.59
BEST3-210ENST00000551160 RGL1Q9NZL6 768 aa11.34□□□□□ -0.59
BEST3-210ENST00000551160 DDX25Q9UHL0 483 aaKnown RBP11.34□□□□□ -0.59
BEST3-210ENST00000551160 NOTCH4Q99466 2003 aa11.33□□□□□ -0.6
BEST3-210ENST00000551160 WDR27A2RRH5 827 aa11.33□□□□□ -0.6
BEST3-210ENST00000551160 ARNTLO00327 626 aa11.33□□□□□ -0.6
BEST3-210ENST00000551160 PAPSS2O95340 614 aaPredicted RBP11.33□□□□□ -0.6
BEST3-210ENST00000551160 P4HBP07237 508 aaKnown RBP11.33□□□□□ -0.6
BEST3-210ENST00000551160 ZNF806P0C7X5 589 aa11.33□□□□□ -0.6
BEST3-210ENST00000551160 PSMC3P17980 439 aa11.33□□□□□ -0.6
BEST3-210ENST00000551160 TKTP29401 623 aaKnown RBP11.33□□□□□ -0.6
BEST3-210ENST00000551160 NLRP5P59047 1200 aa11.33□□□□□ -0.6
BEST3-210ENST00000551160 AKAP17AQ02040 695 aaKnown RBP11.33□□□□□ -0.6
BEST3-210ENST00000551160 ELAVL2Q12926 359 aaKnown RBP11.33□□□□□ -0.6
BEST3-210ENST00000551160 TFDP1Q14186 410 aa11.33□□□□□ -0.6
BEST3-210ENST00000551160 MXD4Q14582 209 aaPredicted RBP11.33□□□□□ -0.6
BEST3-210ENST00000551160 NAB2Q15742 525 aa11.33□□□□□ -0.6
BEST3-210ENST00000551160 PDXDC1Q6P996 788 aa11.33□□□□□ -0.6
BEST3-210ENST00000551160 C4orf19Q8IY42 314 aa11.33□□□□□ -0.6
BEST3-210ENST00000551160 KDF1Q8NAX2 398 aaPredicted RBP11.33□□□□□ -0.6
BEST3-210ENST00000551160 SMARCD2Q92925 531 aa11.33□□□□□ -0.6
BEST3-210ENST00000551160 DDX27Q96GQ7 796 aaKnown RBP11.33□□□□□ -0.6
BEST3-210ENST00000551160 LSM14BQ9BX40 385 aaKnown RBP11.33□□□□□ -0.6
BEST3-210ENST00000551160 TMEM121BQ9BXQ6 578 aaPredicted RBP11.33□□□□□ -0.6
BEST3-210ENST00000551160 TRPV5Q9NQA5 729 aa11.33□□□□□ -0.6
BEST3-210ENST00000551160 ASPMQ8IZT6 3477 aa11.33□□□□□ -0.6
BEST3-210ENST00000551160 MTCL1Q9Y4B5 1905 aaKnown RBP11.33□□□□□ -0.6
BEST3-210ENST00000551160 NID2Q14112 1375 aa11.32□□□□□ -0.6
BEST3-210ENST00000551160 A0A1B0GUA9 196 aa11.32□□□□□ -0.6
BEST3-210ENST00000551160 ARHGEF37A1IGU5 675 aa11.32□□□□□ -0.6
BEST3-210ENST00000551160 SLC38A8A6NNN8 435 aa11.32□□□□□ -0.6
BEST3-210ENST00000551160 I3L4J1 428 aa11.32□□□□□ -0.6
BEST3-210ENST00000551160 GIPC1O14908 333 aa11.32□□□□□ -0.6
BEST3-210ENST00000551160 DKC1O60832 514 aaKnown RBP eCLIP11.32□□□□□ -0.6
BEST3-210ENST00000551160 RECQL4O94761 1208 aa11.32□□□□□ -0.6
BEST3-210ENST00000551160 EPN2O95208 641 aa11.32□□□□□ -0.6
BEST3-210ENST00000551160 TOP3BO95985 862 aaKnown RBP11.32□□□□□ -0.6
BEST3-210ENST00000551160 LRG1P02750 347 aa11.32□□□□□ -0.6
BEST3-210ENST00000551160 GJA1P17302 382 aa11.32□□□□□ -0.6
BEST3-210ENST00000551160 PTPN2P17706 415 aa11.32□□□□□ -0.6
BEST3-210ENST00000551160 GLRA2P23416 452 aa11.32□□□□□ -0.6
BEST3-210ENST00000551160 ROR1Q01973 937 aa11.32□□□□□ -0.6
BEST3-210ENST00000551160 CYP4A11Q02928 519 aa11.32□□□□□ -0.6
BEST3-210ENST00000551160 FOXC1Q12948 553 aa11.32□□□□□ -0.6
BEST3-210ENST00000551160 CTTNQ14247 550 aaKnown RBP11.32□□□□□ -0.6
BEST3-210ENST00000551160 NTRK3Q16288 839 aa11.32□□□□□ -0.6
BEST3-210ENST00000551160 RNF20Q5VTR2 975 aa11.32□□□□□ -0.6
BEST3-210ENST00000551160 TCEAL6Q6IPX3 200 aa11.32□□□□□ -0.6
BEST3-210ENST00000551160 TXNDC11Q6PKC3 985 aa11.32□□□□□ -0.6
BEST3-210ENST00000551160 MOXD1Q6UVY6 613 aa11.32□□□□□ -0.6
BEST3-210ENST00000551160 CD300LGQ6UXG3 332 aa11.32□□□□□ -0.6
BEST3-210ENST00000551160 RTL10Q7L3V2 364 aa11.32□□□□□ -0.6
BEST3-210ENST00000551160 KBTBD6Q86V97 674 aa11.32□□□□□ -0.6
BEST3-210ENST00000551160 WDR5BQ86VZ2 330 aa11.32□□□□□ -0.6
BEST3-210ENST00000551160 TCEAL3Q969E4 200 aa11.32□□□□□ -0.6
BEST3-210ENST00000551160 RNF26Q9BY78 433 aaPredicted RBP11.32□□□□□ -0.6
BEST3-210ENST00000551160 SLKQ9H2G2 1235 aaPredicted RBP11.32□□□□□ -0.6
BEST3-210ENST00000551160 SNTG2Q9NY99 539 aa11.32□□□□□ -0.6
BEST3-210ENST00000551160 BACE2Q9Y5Z0 518 aa11.32□□□□□ -0.6
BEST3-210ENST00000551160 WDR81Q562E7 1941 aa11.32□□□□□ -0.6
BEST3-210ENST00000551160 TTLL13PA6NNM8 815 aa11.31□□□□□ -0.6
BEST3-210ENST00000551160 M0R2N6 131 aa11.31□□□□□ -0.6
BEST3-210ENST00000551160 PRRG1O14668 218 aa11.31□□□□□ -0.6
BEST3-210ENST00000551160 ZNF263O14978 683 aa11.31□□□□□ -0.6
BEST3-210ENST00000551160 TBX3O15119 743 aa11.31□□□□□ -0.6
BEST3-210ENST00000551160 MOSPD3O75425 235 aa11.31□□□□□ -0.6
BEST3-210ENST00000551160 B3GAT3O94766 335 aa11.31□□□□□ -0.6
BEST3-210ENST00000551160 THP07101 528 aa11.31□□□□□ -0.6
BEST3-210ENST00000551160 ARL2P36404 184 aa11.31□□□□□ -0.6
BEST3-210ENST00000551160 PXNP49023 591 aaPredicted RBP11.31□□□□□ -0.6
BEST3-210ENST00000551160 NOVA1P51513 510 aaKnown RBP11.31□□□□□ -0.6
BEST3-210ENST00000551160 FGD1P98174 961 aa11.31□□□□□ -0.6
BEST3-210ENST00000551160 LRRC32Q14392 662 aa11.31□□□□□ -0.6
BEST3-210ENST00000551160 NPY5RQ15761 445 aa11.31□□□□□ -0.6
BEST3-210ENST00000551160 INF2Q27J81 1249 aa11.31□□□□□ -0.6
BEST3-210ENST00000551160 PDZD4Q76G19 769 aaPredicted RBP11.31□□□□□ -0.6
BEST3-210ENST00000551160 OTUD6AQ7L8S5 288 aa11.31□□□□□ -0.6
BEST3-210ENST00000551160 HS6ST3Q8IZP7 471 aa11.31□□□□□ -0.6
BEST3-210ENST00000551160 ZSCAN18Q8TBC5 510 aaPredicted RBP11.31□□□□□ -0.6
BEST3-210ENST00000551160 DEPDC1BQ8WUY9 529 aa11.31□□□□□ -0.6
BEST3-210ENST00000551160 BRF1Q92994 677 aa11.31□□□□□ -0.6
BEST3-210ENST00000551160 RSPRY1Q96DX4 576 aa11.31□□□□□ -0.6
BEST3-210ENST00000551160 DYDC2Q96IM9 177 aa11.31□□□□□ -0.6
BEST3-210ENST00000551160 C22orf23Q9BZE7 217 aa11.31□□□□□ -0.6
BEST3-210ENST00000551160 POLR3FQ9H1D9 316 aaPredicted RBP11.31□□□□□ -0.6
BEST3-210ENST00000551160 PDZD7Q9H5P4 517 aa11.31□□□□□ -0.6
BEST3-210ENST00000551160 KCNMB3Q9NPA1 279 aa11.31□□□□□ -0.6
BEST3-210ENST00000551160 PCDHA4Q9UN74 947 aa11.31□□□□□ -0.6
BEST3-210ENST00000551160 WASF3Q9UPY6 502 aa11.31□□□□□ -0.6
BEST3-210ENST00000551160 COL4A2P08572 1712 aa11.31□□□□□ -0.6
BEST3-210ENST00000551160 SRRM3A6NNA2 597 aaPredicted RBP11.3□□□□□ -0.6
BEST3-210ENST00000551160 HEPACAM2A8MVW5 462 aa11.3□□□□□ -0.6
BEST3-210ENST00000551160 ZNF197O14709 1029 aa11.3□□□□□ -0.6
BEST3-210ENST00000551160 EXTL3O43909 919 aa11.3□□□□□ -0.6
BEST3-210ENST00000551160 SEC24AO95486 1093 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms