RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 DIS3L2Q8IYB7 885 aaKnown RBP8.45□□□□□ -1.06
NEK3-201ENST00000550331 KIAA2013Q8IYS2 634 aa8.45□□□□□ -1.06
NEK3-201ENST00000550331 NECAB1Q8N987 351 aa8.45□□□□□ -1.06
NEK3-201ENST00000550331 DTWD2Q8NBA8 298 aa8.45□□□□□ -1.06
NEK3-201ENST00000550331 NSUN7Q8NE18 718 aaKnown RBP8.45□□□□□ -1.06
NEK3-201ENST00000550331 ASAP3Q8TDY4 903 aa8.45□□□□□ -1.06
NEK3-201ENST00000550331 HDAC7Q8WUI4 952 aa8.45□□□□□ -1.06
NEK3-201ENST00000550331 STAMQ92783 540 aa8.45□□□□□ -1.06
NEK3-201ENST00000550331 CPB2Q96IY4 423 aa8.45□□□□□ -1.06
NEK3-201ENST00000550331 PRIMPOLQ96LW4 560 aa8.45□□□□□ -1.06
NEK3-201ENST00000550331 COLEC11Q9BWP8 271 aa8.45□□□□□ -1.06
NEK3-201ENST00000550331 WDR6Q9NNW5 1121 aaKnown RBP8.45□□□□□ -1.06
NEK3-201ENST00000550331 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.45□□□□□ -1.06
NEK3-201ENST00000550331 CHST7Q9NS84 486 aa8.45□□□□□ -1.06
NEK3-201ENST00000550331 IGSF9Q9P2J2 1179 aa8.45□□□□□ -1.06
NEK3-201ENST00000550331 DAXXQ9UER7 740 aaPredicted RBP8.45□□□□□ -1.06
NEK3-201ENST00000550331 DUSP12Q9UNI6 340 aa8.45□□□□□ -1.06
NEK3-201ENST00000550331 HES2Q9Y543 173 aa8.45□□□□□ -1.06
NEK3-201ENST00000550331 C2orf16Q68DN1 1984 aa8.44□□□□□ -1.06
NEK3-201ENST00000550331 BTBD18B2RXH4 712 aa8.44□□□□□ -1.06
NEK3-201ENST00000550331 PI15O43692 258 aa8.44□□□□□ -1.06
NEK3-201ENST00000550331 DTNBO60941 627 aa8.44□□□□□ -1.06
NEK3-201ENST00000550331 LARGE1O95461 756 aa8.44□□□□□ -1.06
NEK3-201ENST00000550331 LMNAP02545 664 aaKnown RBP8.44□□□□□ -1.06
NEK3-201ENST00000550331 TXKP42681 527 aa8.44□□□□□ -1.06
NEK3-201ENST00000550331 PUM1Q14671 1186 aaKnown RBP eCLIP8.44□□□□□ -1.06
NEK3-201ENST00000550331 CDCA2Q69YH5 1023 aaPredicted RBP8.44□□□□□ -1.06
NEK3-201ENST00000550331 FUT10Q6P4F1 479 aa8.44□□□□□ -1.06
NEK3-201ENST00000550331 TAS1R1Q7RTX1 841 aa8.44□□□□□ -1.06
NEK3-201ENST00000550331 GSTCDQ8NEC7 633 aa8.44□□□□□ -1.06
NEK3-201ENST00000550331 MCPH1Q8NEM0 835 aa8.44□□□□□ -1.06
NEK3-201ENST00000550331 FEZF2Q8TBJ5 459 aa8.44□□□□□ -1.06
NEK3-201ENST00000550331 HINFPQ9BQA5 517 aa8.44□□□□□ -1.06
NEK3-201ENST00000550331 RTP3Q9BQQ7 232 aa8.44□□□□□ -1.06
NEK3-201ENST00000550331 POLR3FQ9H1D9 316 aaPredicted RBP8.44□□□□□ -1.06
NEK3-201ENST00000550331 NXF3Q9H4D5 531 aaKnown RBP8.44□□□□□ -1.06
NEK3-201ENST00000550331 PLEKHA4Q9H4M7 779 aa8.44□□□□□ -1.06
NEK3-201ENST00000550331 KCNK12Q9HB15 430 aa8.44□□□□□ -1.06
NEK3-201ENST00000550331 TUFT1Q9NNX1 390 aa8.44□□□□□ -1.06
NEK3-201ENST00000550331 PRMT7Q9NVM4 692 aaPredicted RBP8.44□□□□□ -1.06
NEK3-201ENST00000550331 MIOSQ9NXC5 875 aa8.44□□□□□ -1.06
NEK3-201ENST00000550331 FNIP2Q9P278 1114 aa8.44□□□□□ -1.06
NEK3-201ENST00000550331 WASF2Q9Y6W5 498 aa8.44□□□□□ -1.06
NEK3-201ENST00000550331 CCDC195A0A1B0GUA6 201 aa8.43□□□□□ -1.06
NEK3-201ENST00000550331 F8W810 466 aa8.43□□□□□ -1.06
NEK3-201ENST00000550331 B4GALT5O43286 388 aa8.43□□□□□ -1.06
NEK3-201ENST00000550331 USO1O60763 962 aaKnown RBP8.43□□□□□ -1.06
NEK3-201ENST00000550331 NPTXRO95502 500 aa8.43□□□□□ -1.06
NEK3-201ENST00000550331 SPATA31C1P0DKV0 1188 aa8.43□□□□□ -1.06
NEK3-201ENST00000550331 NPR3P17342 541 aa8.43□□□□□ -1.06
NEK3-201ENST00000550331 AKAP5P24588 427 aa8.43□□□□□ -1.06
NEK3-201ENST00000550331 ORC2Q13416 577 aaPredicted RBP8.43□□□□□ -1.06
NEK3-201ENST00000550331 TUSC3Q13454 348 aa8.43□□□□□ -1.06
NEK3-201ENST00000550331 FAM187BQ17R55 369 aa8.43□□□□□ -1.06
NEK3-201ENST00000550331 USP41Q3LFD5 358 aa8.43□□□□□ -1.06
NEK3-201ENST00000550331 ZBTB8OSQ8IWT0 167 aa8.43□□□□□ -1.06
NEK3-201ENST00000550331 SIX5Q8N196 739 aa8.43□□□□□ -1.06
NEK3-201ENST00000550331 ERMNQ8TAM6 284 aa8.43□□□□□ -1.06
NEK3-201ENST00000550331 PIGOQ8TEQ8 1089 aa8.43□□□□□ -1.06
NEK3-201ENST00000550331 SMG7Q92540 1137 aaKnown RBP8.43□□□□□ -1.06
NEK3-201ENST00000550331 NXPE3Q969Y0 559 aa8.43□□□□□ -1.06
NEK3-201ENST00000550331 ZNF707Q96C28 371 aaPredicted RBP8.43□□□□□ -1.06
NEK3-201ENST00000550331 CNTNAP3BQ96NU0 1288 aa8.43□□□□□ -1.06
NEK3-201ENST00000550331 APOL6Q9BWW8 343 aa8.43□□□□□ -1.06
NEK3-201ENST00000550331 CNTNAP3Q9BZ76 1288 aa8.43□□□□□ -1.06
NEK3-201ENST00000550331 GPR62Q9BZJ7 368 aa8.43□□□□□ -1.06
NEK3-201ENST00000550331 C2orf40Q9H1Z8 148 aa8.43□□□□□ -1.06
NEK3-201ENST00000550331 SEMA4AQ9H3S1 761 aa8.43□□□□□ -1.06
NEK3-201ENST00000550331 FZD8Q9H461 694 aa8.43□□□□□ -1.06
NEK3-201ENST00000550331 ZDHHC7Q9NXF8 308 aa8.43□□□□□ -1.06
NEK3-201ENST00000550331 EPS15L1Q9UBC2 864 aa8.43□□□□□ -1.06
NEK3-201ENST00000550331 ADAM28Q9UKQ2 775 aa8.43□□□□□ -1.06
NEK3-201ENST00000550331 FBXL21Q9UKT6 434 aa8.43□□□□□ -1.06
NEK3-201ENST00000550331 R4GN57 208 aa8.43□□□□□ -1.06
NEK3-201ENST00000550331 FRYLO94915 3013 aa8.43□□□□□ -1.06
NEK3-201ENST00000550331 CLUHO75153 1309 aa8.43□□□□□ -1.06
NEK3-201ENST00000550331 SF3B1O75533 1304 aaKnown RBP eCLIP8.43□□□□□ -1.06
NEK3-201ENST00000550331 MAP1BP46821 2468 aaKnown RBP8.42□□□□□ -1.06
NEK3-201ENST00000550331 LRRIQ4A6NIV6 560 aa8.42□□□□□ -1.06
NEK3-201ENST00000550331 N4BP3O15049 544 aa8.42□□□□□ -1.06
NEK3-201ENST00000550331 TGM5O43548 720 aa8.42□□□□□ -1.06
NEK3-201ENST00000550331 JAK2O60674 1132 aa8.42□□□□□ -1.06
NEK3-201ENST00000550331 N4BP1O75113 896 aaKnown RBP8.42□□□□□ -1.06
NEK3-201ENST00000550331 RFPL2O75678 378 aa8.42□□□□□ -1.06
NEK3-201ENST00000550331 NEFLP07196 543 aa8.42□□□□□ -1.06
NEK3-201ENST00000550331 ATP2B1P20020 1258 aa8.42□□□□□ -1.06
NEK3-201ENST00000550331 MUTP22033 750 aa8.42□□□□□ -1.06
NEK3-201ENST00000550331 GBP2P32456 591 aaPredicted RBP8.42□□□□□ -1.06
NEK3-201ENST00000550331 NEK4P51957 841 aa8.42□□□□□ -1.06
NEK3-201ENST00000550331 HSP90AA2PQ14568 343 aaPredicted RBP8.42□□□□□ -1.06
NEK3-201ENST00000550331 SAFBQ15424 915 aaKnown RBP eCLIP8.42□□□□□ -1.06
NEK3-201ENST00000550331 MAPK6Q16659 721 aa8.42□□□□□ -1.06
NEK3-201ENST00000550331 LILRA6Q6PI73 481 aa8.42□□□□□ -1.06
NEK3-201ENST00000550331 CDR2LQ86X02 465 aaPredicted RBP8.42□□□□□ -1.06
NEK3-201ENST00000550331 CATSPER3Q86XQ3 398 aa8.42□□□□□ -1.06
NEK3-201ENST00000550331 NACC1Q96RE7 527 aa8.42□□□□□ -1.06
NEK3-201ENST00000550331 POLR3CQ9BUI4 534 aaPredicted RBP8.42□□□□□ -1.06
NEK3-201ENST00000550331 NT5C3AQ9H0P0 336 aa8.42□□□□□ -1.06
NEK3-201ENST00000550331 TMEM60Q9H2L4 133 aa8.42□□□□□ -1.06
NEK3-201ENST00000550331 GPRC5CQ9NQ84 441 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms