RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 ZBTB44Q8NCP5 570 aa10.88□□□□□ -0.67
TRAFD1-207ENST00000550051 CCDC43Q96MW1 224 aaKnown RBP10.88□□□□□ -0.67
TRAFD1-207ENST00000550051 NACC1Q96RE7 527 aa10.88□□□□□ -0.67
TRAFD1-207ENST00000550051 C2orf40Q9H1Z8 148 aa10.88□□□□□ -0.67
TRAFD1-207ENST00000550051 PDZD7Q9H5P4 517 aa10.88□□□□□ -0.67
TRAFD1-207ENST00000550051 TUFT1Q9NNX1 390 aa10.88□□□□□ -0.67
TRAFD1-207ENST00000550051 GPRC5CQ9NQ84 441 aa10.88□□□□□ -0.67
TRAFD1-207ENST00000550051 SPATA6Q9NWH7 488 aaPredicted RBP10.88□□□□□ -0.67
TRAFD1-207ENST00000550051 SNTG2Q9NY99 539 aa10.88□□□□□ -0.67
TRAFD1-207ENST00000550051 GDE1Q9NZC3 331 aa10.88□□□□□ -0.67
TRAFD1-207ENST00000550051 DNMT3BQ9UBC3 853 aaKnown RBP10.88□□□□□ -0.67
TRAFD1-207ENST00000550051 MTRRQ9UBK8 725 aa10.88□□□□□ -0.67
TRAFD1-207ENST00000550051 TPCN1Q9ULQ1 816 aa10.88□□□□□ -0.67
TRAFD1-207ENST00000550051 BACE2Q9Y5Z0 518 aa10.88□□□□□ -0.67
TRAFD1-207ENST00000550051 TRIP11Q15643 1979 aa10.88□□□□□ -0.67
TRAFD1-207ENST00000550051 NCAM2O15394 837 aa10.87□□□□□ -0.67
TRAFD1-207ENST00000550051 CCL16O15467 120 aa10.87□□□□□ -0.67
TRAFD1-207ENST00000550051 LILRB5O75023 590 aa10.87□□□□□ -0.67
TRAFD1-207ENST00000550051 ECI2O75521 394 aa10.87□□□□□ -0.67
TRAFD1-207ENST00000550051 RECQL4O94761 1208 aa10.87□□□□□ -0.67
TRAFD1-207ENST00000550051 CYP11B2P19099 503 aa10.87□□□□□ -0.67
TRAFD1-207ENST00000550051 ATP2B1P20020 1258 aa10.87□□□□□ -0.67
TRAFD1-207ENST00000550051 FZD5Q13467 585 aa10.87□□□□□ -0.67
TRAFD1-207ENST00000550051 PRPF4BQ13523 1007 aaKnown RBP10.87□□□□□ -0.67
TRAFD1-207ENST00000550051 UBXN2BQ14CS0 331 aa10.87□□□□□ -0.67
TRAFD1-207ENST00000550051 PABPC1LQ4VXU2 614 aaKnown RBP10.87□□□□□ -0.67
TRAFD1-207ENST00000550051 CD300LGQ6UXG3 332 aa10.87□□□□□ -0.67
TRAFD1-207ENST00000550051 MAEAQ7L5Y9 396 aa10.87□□□□□ -0.67
TRAFD1-207ENST00000550051 NOSTRINQ8IVI9 506 aa10.87□□□□□ -0.67
TRAFD1-207ENST00000550051 NPAS3Q8IXF0 933 aa10.87□□□□□ -0.67
TRAFD1-207ENST00000550051 SLC7A14Q8TBB6 771 aa10.87□□□□□ -0.67
TRAFD1-207ENST00000550051 HASPINQ8TF76 798 aa10.87□□□□□ -0.67
TRAFD1-207ENST00000550051 ATRIPQ8WXE1 791 aa10.87□□□□□ -0.67
TRAFD1-207ENST00000550051 HINFPQ9BQA5 517 aa10.87□□□□□ -0.67
TRAFD1-207ENST00000550051 ADPGKQ9BRR6 497 aa10.87□□□□□ -0.67
TRAFD1-207ENST00000550051 POLR3CQ9BUI4 534 aaPredicted RBP10.87□□□□□ -0.67
TRAFD1-207ENST00000550051 CCDC113Q9H0I3 377 aa10.87□□□□□ -0.67
TRAFD1-207ENST00000550051 CXCL16Q9H2A7 254 aa10.87□□□□□ -0.67
TRAFD1-207ENST00000550051 BRMS1Q9HCU9 246 aa10.87□□□□□ -0.67
TRAFD1-207ENST00000550051 LTB4R2Q9NPC1 389 aa10.87□□□□□ -0.67
TRAFD1-207ENST00000550051 HCFC1R1Q9NWW0 138 aa10.87□□□□□ -0.67
TRAFD1-207ENST00000550051 ZSCAN32Q9NX65 697 aa10.87□□□□□ -0.67
TRAFD1-207ENST00000550051 POLIQ9UNA4 740 aa10.87□□□□□ -0.67
TRAFD1-207ENST00000550051 ARHGEF37A1IGU5 675 aa10.86□□□□□ -0.67
TRAFD1-207ENST00000550051 BTBD18B2RXH4 712 aa10.86□□□□□ -0.67
TRAFD1-207ENST00000550051 TRAPPC3O43617 180 aa10.86□□□□□ -0.67
TRAFD1-207ENST00000550051 NEMFO60524 1076 aa10.86□□□□□ -0.67
TRAFD1-207ENST00000550051 USO1O60763 962 aaKnown RBP10.86□□□□□ -0.67
TRAFD1-207ENST00000550051 GABBR2O75899 941 aa10.86□□□□□ -0.67
TRAFD1-207ENST00000550051 B3GAT3O94766 335 aa10.86□□□□□ -0.67
TRAFD1-207ENST00000550051 MICAL2O94851 1124 aa10.86□□□□□ -0.67
TRAFD1-207ENST00000550051 ABLIM3O94929 683 aa10.86□□□□□ -0.67
TRAFD1-207ENST00000550051 CD72P21854 359 aa10.86□□□□□ -0.67
TRAFD1-207ENST00000550051 NAMPTP43490 491 aa10.86□□□□□ -0.67
TRAFD1-207ENST00000550051 CSTF1Q05048 431 aaKnown RBP10.86□□□□□ -0.67
TRAFD1-207ENST00000550051 ANKRD1Q15327 319 aa10.86□□□□□ -0.67
TRAFD1-207ENST00000550051 UPP1Q16831 310 aa10.86□□□□□ -0.67
TRAFD1-207ENST00000550051 RSPO4Q2I0M5 234 aaPredicted RBP10.86□□□□□ -0.67
TRAFD1-207ENST00000550051 ZNF852Q6ZMS4 543 aa10.86□□□□□ -0.67
TRAFD1-207ENST00000550051 ANKS3Q6ZW76 656 aa10.86□□□□□ -0.67
TRAFD1-207ENST00000550051 ZNF461Q8TAF7 563 aa10.86□□□□□ -0.67
TRAFD1-207ENST00000550051 UROC1Q96N76 676 aa10.86□□□□□ -0.67
TRAFD1-207ENST00000550051 PPP1R10Q96QC0 940 aaKnown RBP10.86□□□□□ -0.67
TRAFD1-207ENST00000550051 KXD1Q9BQD3 176 aa10.86□□□□□ -0.67
TRAFD1-207ENST00000550051 FAM126AQ9BYI3 521 aaPredicted RBP10.86□□□□□ -0.67
TRAFD1-207ENST00000550051 EPC1Q9H2F5 836 aa10.86□□□□□ -0.67
TRAFD1-207ENST00000550051 MRPS17Q9Y2R5 130 aaKnown RBP10.86□□□□□ -0.67
TRAFD1-207ENST00000550051 MRPS23Q9Y3D9 190 aaKnown RBP10.86□□□□□ -0.67
TRAFD1-207ENST00000550051 CEP250Q9BV73 2442 aa10.85□□□□□ -0.67
TRAFD1-207ENST00000550051 SHISA7A6NL88 538 aa10.85□□□□□ -0.67
TRAFD1-207ENST00000550051 PRR5-ARHGAP8B1AHC4 643 aa10.85□□□□□ -0.67
TRAFD1-207ENST00000550051 WNT7AO00755 349 aa10.85□□□□□ -0.67
TRAFD1-207ENST00000550051 TBC1D4O60343 1298 aa10.85□□□□□ -0.67
TRAFD1-207ENST00000550051 DTNBO60941 627 aa10.85□□□□□ -0.67
TRAFD1-207ENST00000550051 MED24O75448 989 aa10.85□□□□□ -0.67
TRAFD1-207ENST00000550051 PTPN2P17706 415 aa10.85□□□□□ -0.67
TRAFD1-207ENST00000550051 MUTP22033 750 aa10.85□□□□□ -0.67
TRAFD1-207ENST00000550051 IGFBP6P24592 240 aaPredicted RBP10.85□□□□□ -0.67
TRAFD1-207ENST00000550051 TARSP26639 723 aaKnown RBP10.85□□□□□ -0.67
TRAFD1-207ENST00000550051 RPA1P27694 616 aa10.85□□□□□ -0.67
TRAFD1-207ENST00000550051 CLCN6P51797 869 aa10.85□□□□□ -0.67
TRAFD1-207ENST00000550051 EFNA5P52803 228 aa10.85□□□□□ -0.67
TRAFD1-207ENST00000550051 ARHGAP8P85298 464 aa10.85□□□□□ -0.67
TRAFD1-207ENST00000550051 ADCY1Q08828 1119 aa10.85□□□□□ -0.67
TRAFD1-207ENST00000550051 PPP2R5AQ15172 486 aa10.85□□□□□ -0.67
TRAFD1-207ENST00000550051 XKR4Q5GH76 650 aa10.85□□□□□ -0.67
TRAFD1-207ENST00000550051 EEF1DP3Q658K8 133 aa10.85□□□□□ -0.67
TRAFD1-207ENST00000550051 SLC8B1Q6J4K2 584 aa10.85□□□□□ -0.67
TRAFD1-207ENST00000550051 ALKAL1Q6UXT8 129 aa10.85□□□□□ -0.67
TRAFD1-207ENST00000550051 ZNF687Q8N1G0 1237 aa10.85□□□□□ -0.67
TRAFD1-207ENST00000550051 BSNDQ8WZ55 320 aa10.85□□□□□ -0.67
TRAFD1-207ENST00000550051 SECISBP2LQ93073 1101 aaKnown RBP10.85□□□□□ -0.67
TRAFD1-207ENST00000550051 ELSPBP1Q96BH3 223 aa10.85□□□□□ -0.67
TRAFD1-207ENST00000550051 MCRS1Q96EZ8 462 aa10.85□□□□□ -0.67
TRAFD1-207ENST00000550051 DDX27Q96GQ7 796 aaKnown RBP10.85□□□□□ -0.67
TRAFD1-207ENST00000550051 PLA2G2FQ9BZM2 168 aa10.85□□□□□ -0.67
TRAFD1-207ENST00000550051 TRPV5Q9NQA5 729 aa10.85□□□□□ -0.67
TRAFD1-207ENST00000550051 NCDNQ9UBB6 729 aa10.85□□□□□ -0.67
TRAFD1-207ENST00000550051 CDY1Q9Y6F8 540 aa10.85□□□□□ -0.67
TRAFD1-207ENST00000550051 COL4A3Q01955 1670 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms