RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 OCA2Q04671 838 aa5.85□□□□□ -1.47
CCDC38-208ENST00000549876 MST1LQ2TV78 715 aa5.85□□□□□ -1.47
CCDC38-208ENST00000549876 SPDYE7PQ495Y7 208 aa5.85□□□□□ -1.47
CCDC38-208ENST00000549876 TSHZ3Q63HK5 1081 aa5.85□□□□□ -1.47
CCDC38-208ENST00000549876 ZNF572Q7Z3I7 529 aaPredicted RBP5.85□□□□□ -1.47
CCDC38-208ENST00000549876 KCNK18Q7Z418 384 aa5.85□□□□□ -1.47
CCDC38-208ENST00000549876 TRMT2AQ8IZ69 625 aaKnown RBP5.85□□□□□ -1.47
CCDC38-208ENST00000549876 REPS2Q8NFH8 660 aa5.85□□□□□ -1.47
CCDC38-208ENST00000549876 TGFBRAP1Q8WUH2 860 aa5.85□□□□□ -1.47
CCDC38-208ENST00000549876 BOD1Q96IK1 185 aa5.85□□□□□ -1.47
CCDC38-208ENST00000549876 PAWRQ96IZ0 340 aaKnown RBP5.85□□□□□ -1.47
CCDC38-208ENST00000549876 PHACTR3Q96KR7 559 aa5.85□□□□□ -1.47
CCDC38-208ENST00000549876 GOLGA8AA7E2F4 631 aa5.84□□□□□ -1.47
CCDC38-208ENST00000549876 MRPS9P82933 396 aaKnown RBP5.84□□□□□ -1.47
CCDC38-208ENST00000549876 EPHA10Q5JZY3 1008 aa5.84□□□□□ -1.47
CCDC38-208ENST00000549876 LHFPL2Q6ZUX7 228 aa5.84□□□□□ -1.47
CCDC38-208ENST00000549876 Q6ZVL8 140 aa5.84□□□□□ -1.47
CCDC38-208ENST00000549876 MED25Q71SY5 747 aa5.84□□□□□ -1.47
CCDC38-208ENST00000549876 ZNF384Q8TF68 577 aa5.84□□□□□ -1.47
CCDC38-208ENST00000549876 CHAC2Q8WUX2 184 aa5.84□□□□□ -1.47
CCDC38-208ENST00000549876 RIN2Q8WYP3 895 aaPredicted RBP5.84□□□□□ -1.47
CCDC38-208ENST00000549876 PDLIM2Q96JY6 352 aa5.84□□□□□ -1.47
CCDC38-208ENST00000549876 ZSWIM1Q9BR11 485 aa5.84□□□□□ -1.47
CCDC38-208ENST00000549876 SLKQ9H2G2 1235 aaPredicted RBP5.84□□□□□ -1.47
CCDC38-208ENST00000549876 KIAA1586Q9HCI6 787 aa5.84□□□□□ -1.47
CCDC38-208ENST00000549876 SCOCQ9UIL1 159 aa5.84□□□□□ -1.47
CCDC38-208ENST00000549876 TMA7Q9Y2S6 64 aaKnown RBP5.84□□□□□ -1.47
CCDC38-208ENST00000549876 NOX1Q9Y5S8 564 aa5.84□□□□□ -1.47
CCDC38-208ENST00000549876 A0A1B0GTW7 788 aa5.83□□□□□ -1.48
CCDC38-208ENST00000549876 CCDC78A2IDD5 438 aa5.83□□□□□ -1.48
CCDC38-208ENST00000549876 LRRC3CA6NJW4 275 aa5.83□□□□□ -1.48
CCDC38-208ENST00000549876 PHF2O75151 1096 aa5.83□□□□□ -1.48
CCDC38-208ENST00000549876 ADSLP30566 484 aaPredicted RBP5.83□□□□□ -1.48
CCDC38-208ENST00000549876 PTPN7P35236 360 aa5.83□□□□□ -1.48
CCDC38-208ENST00000549876 SCAND1P57086 179 aa5.83□□□□□ -1.48
CCDC38-208ENST00000549876 CCT2P78371 535 aaKnown RBP5.83□□□□□ -1.48
CCDC38-208ENST00000549876 STAT4Q14765 748 aa5.83□□□□□ -1.48
CCDC38-208ENST00000549876 GPR156Q8NFN8 814 aa5.83□□□□□ -1.48
CCDC38-208ENST00000549876 FUBP3Q96I24 572 aaKnown RBP eCLIP5.83□□□□□ -1.48
CCDC38-208ENST00000549876 QRSL1Q9H0R6 528 aaKnown RBP5.83□□□□□ -1.48
CCDC38-208ENST00000549876 SETD1BQ9UPS6 1966 aaKnown RBP5.83□□□□□ -1.48
CCDC38-208ENST00000549876 PROP1O75360 226 aa5.82□□□□□ -1.48
CCDC38-208ENST00000549876 ALOX15P16050 662 aaPredicted RBP5.82□□□□□ -1.48
CCDC38-208ENST00000549876 CXADRP78310 365 aa5.82□□□□□ -1.48
CCDC38-208ENST00000549876 ADRM1Q16186 407 aa5.82□□□□□ -1.48
CCDC38-208ENST00000549876 MUM1Q2TAK8 710 aa5.82□□□□□ -1.48
CCDC38-208ENST00000549876 LCE1AQ5T7P2 110 aa5.82□□□□□ -1.48
CCDC38-208ENST00000549876 MICALCLQ6ZW33 695 aa5.82□□□□□ -1.48
CCDC38-208ENST00000549876 ARHGEF25Q86VW2 580 aa5.82□□□□□ -1.48
CCDC38-208ENST00000549876 FAM43AQ8N2R8 423 aa5.82□□□□□ -1.48
CCDC38-208ENST00000549876 OR7D4Q8NG98 312 aa5.82□□□□□ -1.48
CCDC38-208ENST00000549876 AUTS2Q8WXX7 1259 aa5.82□□□□□ -1.48
CCDC38-208ENST00000549876 NACC2Q96BF6 587 aa5.82□□□□□ -1.48
CCDC38-208ENST00000549876 GALNT9Q9HCQ5 603 aa5.82□□□□□ -1.48
CCDC38-208ENST00000549876 TBCCD1Q9NVR7 557 aa5.82□□□□□ -1.48
CCDC38-208ENST00000549876 DNAJC9-AS1A6NH13 148 aa5.81□□□□□ -1.48
CCDC38-208ENST00000549876 AKR1B10O60218 316 aa5.81□□□□□ -1.48
CCDC38-208ENST00000549876 VIL1P09327 827 aaKnown RBP5.81□□□□□ -1.48
CCDC38-208ENST00000549876 FGFR4P22455 802 aa5.81□□□□□ -1.48
CCDC38-208ENST00000549876 GCSHP23434 173 aa5.81□□□□□ -1.48
CCDC38-208ENST00000549876 GPR3P46089 330 aa5.81□□□□□ -1.48
CCDC38-208ENST00000549876 RAP2BP61225 183 aa5.81□□□□□ -1.48
CCDC38-208ENST00000549876 TMPRSS15P98073 1019 aa5.81□□□□□ -1.48
CCDC38-208ENST00000549876 PPP3CAQ08209 521 aa5.81□□□□□ -1.48
CCDC38-208ENST00000549876 RRP12Q5JTH9 1297 aaKnown RBP5.81□□□□□ -1.48
CCDC38-208ENST00000549876 BHLHA9Q7RTU4 235 aa5.81□□□□□ -1.48
CCDC38-208ENST00000549876 KRT26Q7Z3Y9 468 aa5.81□□□□□ -1.48
CCDC38-208ENST00000549876 DRC7Q8IY82 874 aa5.81□□□□□ -1.48
CCDC38-208ENST00000549876 FATE1Q969F0 183 aa5.81□□□□□ -1.48
CCDC38-208ENST00000549876 RNF31Q96EP0 1072 aa5.81□□□□□ -1.48
CCDC38-208ENST00000549876 FAM126AQ9BYI3 521 aaPredicted RBP5.81□□□□□ -1.48
CCDC38-208ENST00000549876 RNPEPQ9H4A4 650 aa5.81□□□□□ -1.48
CCDC38-208ENST00000549876 BCO1Q9HAY6 547 aa5.81□□□□□ -1.48
CCDC38-208ENST00000549876 IFT122Q9HBG6 1241 aa5.81□□□□□ -1.48
CCDC38-208ENST00000549876 C14orf119Q9NWQ9 140 aa5.81□□□□□ -1.48
CCDC38-208ENST00000549876 FAM30AQ9NZY2 134 aa5.81□□□□□ -1.48
CCDC38-208ENST00000549876 CGB1A6NKQ9 187 aa5.8□□□□□ -1.48
CCDC38-208ENST00000549876 PRKD3O94806 890 aa5.8□□□□□ -1.48
CCDC38-208ENST00000549876 MRPS35P82673 323 aaKnown RBP5.8□□□□□ -1.48
CCDC38-208ENST00000549876 SP140Q13342 867 aa5.8□□□□□ -1.48
CCDC38-208ENST00000549876 TOR2AQ5JU69 321 aa5.8□□□□□ -1.48
CCDC38-208ENST00000549876 SH2D3CQ8N5H7 860 aa5.8□□□□□ -1.48
CCDC38-208ENST00000549876 SCARB1Q8WTV0 552 aa5.8□□□□□ -1.48
CCDC38-208ENST00000549876 HOXB13Q92826 284 aaPredicted RBP5.8□□□□□ -1.48
CCDC38-208ENST00000549876 REXO4Q9GZR2 422 aaKnown RBP5.8□□□□□ -1.48
CCDC38-208ENST00000549876 KLK15Q9H2R5 256 aa5.8□□□□□ -1.48
CCDC38-208ENST00000549876 CASS4Q9NQ75 786 aa5.8□□□□□ -1.48
CCDC38-208ENST00000549876 LRIT1Q9P2V4 623 aa5.8□□□□□ -1.48
CCDC38-208ENST00000549876 KCNE5Q9UJ90 142 aa5.8□□□□□ -1.48
CCDC38-208ENST00000549876 GPR39O43194 453 aa5.79□□□□□ -1.48
CCDC38-208ENST00000549876 MTHFD2P13995 350 aa5.79□□□□□ -1.48
CCDC38-208ENST00000549876 POU3F3P20264 500 aaPredicted RBP5.79□□□□□ -1.48
CCDC38-208ENST00000549876 SREBF1P36956 1147 aa5.79□□□□□ -1.48
CCDC38-208ENST00000549876 SRSF2Q01130 221 aaKnown RBP5.79□□□□□ -1.48
CCDC38-208ENST00000549876 CYP2A13Q16696 494 aa5.79□□□□□ -1.48
CCDC38-208ENST00000549876 ANO4Q32M45 955 aa5.79□□□□□ -1.48
CCDC38-208ENST00000549876 CT47A1Q5JQC4 288 aaPredicted RBP5.79□□□□□ -1.48
CCDC38-208ENST00000549876 C1QL2Q7Z5L3 287 aa5.79□□□□□ -1.48
CCDC38-208ENST00000549876 FBXO18Q8NFZ0 1043 aa5.79□□□□□ -1.48
CCDC38-208ENST00000549876 AIFM2Q9BRQ8 373 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms