RNA–Protein interactions for RNA: ENST00000549034.1

RAB5B-205, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-205ENST00000549034 SPATA20Q8TB22 786 aa10.44□□□□□ -0.74
RAB5B-205ENST00000549034 PPM1EQ8WY54 764 aa10.44□□□□□ -0.74
RAB5B-205ENST00000549034 TMEM169Q96HH4 297 aa10.44□□□□□ -0.74
RAB5B-205ENST00000549034 SNX27Q96L92 541 aa10.44□□□□□ -0.74
RAB5B-205ENST00000549034 ZMAT2Q96NC0 199 aaKnown RBP10.44□□□□□ -0.74
RAB5B-205ENST00000549034 KIAA1586Q9HCI6 787 aa10.44□□□□□ -0.74
RAB5B-205ENST00000549034 AGPAT3Q9NRZ7 376 aa10.44□□□□□ -0.74
RAB5B-205ENST00000549034 SLC38A7Q9NVC3 462 aa10.44□□□□□ -0.74
RAB5B-205ENST00000549034 HSPBP1Q9NZL4 362 aa10.44□□□□□ -0.74
RAB5B-205ENST00000549034 CNTN3Q9P232 1028 aa10.44□□□□□ -0.74
RAB5B-205ENST00000549034 KIAA1468Q9P260 1216 aa10.44□□□□□ -0.74
RAB5B-205ENST00000549034 CGNQ9P2M7 1197 aaKnown RBP10.44□□□□□ -0.74
RAB5B-205ENST00000549034 CACNG4Q9UBN1 327 aa10.44□□□□□ -0.74
RAB5B-205ENST00000549034 PRG3Q9Y2Y8 225 aaPredicted RBP10.44□□□□□ -0.74
RAB5B-205ENST00000549034 RANBP2P49792 3224 aaKnown RBP10.44□□□□□ -0.74
RAB5B-205ENST00000549034 ZMYM2Q9UBW7 1377 aa10.43□□□□□ -0.74
RAB5B-205ENST00000549034 PDXKO00764 312 aa10.43□□□□□ -0.74
RAB5B-205ENST00000549034 FAM189A1O60320 539 aa10.43□□□□□ -0.74
RAB5B-205ENST00000549034 EXOC3O60645 756 aa10.43□□□□□ -0.74
RAB5B-205ENST00000549034 CXCL14O95715 111 aa10.43□□□□□ -0.74
RAB5B-205ENST00000549034 DNAJB1P25685 340 aa10.43□□□□□ -0.74
RAB5B-205ENST00000549034 MCM4P33991 863 aa10.43□□□□□ -0.74
RAB5B-205ENST00000549034 CA8P35219 290 aa10.43□□□□□ -0.74
RAB5B-205ENST00000549034 CLCNKBP51801 687 aa10.43□□□□□ -0.74
RAB5B-205ENST00000549034 ERVFC1P60507 584 aa10.43□□□□□ -0.74
RAB5B-205ENST00000549034 DSC1Q08554 894 aa10.43□□□□□ -0.74
RAB5B-205ENST00000549034 NAB2Q15742 525 aa10.43□□□□□ -0.74
RAB5B-205ENST00000549034 JADE1Q6IE81 842 aa10.43□□□□□ -0.74
RAB5B-205ENST00000549034 DCLRE1AQ6PJP8 1040 aa10.43□□□□□ -0.74
RAB5B-205ENST00000549034 GUF1Q8N442 669 aaKnown RBP10.43□□□□□ -0.74
RAB5B-205ENST00000549034 XXYLT1Q8NBI6 393 aa10.43□□□□□ -0.74
RAB5B-205ENST00000549034 GOLGA5Q8TBA6 731 aa10.43□□□□□ -0.74
RAB5B-205ENST00000549034 GPT2Q8TD30 523 aa10.43□□□□□ -0.74
RAB5B-205ENST00000549034 C18orf25Q96B23 403 aaPredicted RBP10.43□□□□□ -0.74
RAB5B-205ENST00000549034 IGSF21Q96ID5 467 aa10.43□□□□□ -0.74
RAB5B-205ENST00000549034 PPP1R10Q96QC0 940 aaKnown RBP10.43□□□□□ -0.74
RAB5B-205ENST00000549034 PAAF1Q9BRP4 392 aa10.43□□□□□ -0.74
RAB5B-205ENST00000549034 GTPBP4Q9BZE4 634 aaKnown RBP10.43□□□□□ -0.74
RAB5B-205ENST00000549034 KCTD10Q9H3F6 313 aa10.43□□□□□ -0.74
RAB5B-205ENST00000549034 CLSTN2Q9H4D0 955 aa10.43□□□□□ -0.74
RAB5B-205ENST00000549034 ASB7Q9H672 318 aa10.43□□□□□ -0.74
RAB5B-205ENST00000549034 GOLGA2P5Q9HBQ8 144 aa10.43□□□□□ -0.74
RAB5B-205ENST00000549034 RBAKQ9NYW8 714 aaPredicted RBP10.43□□□□□ -0.74
RAB5B-205ENST00000549034 LMCD1Q9NZU5 365 aa10.43□□□□□ -0.74
RAB5B-205ENST00000549034 MTCH2Q9Y6C9 303 aa10.43□□□□□ -0.74
RAB5B-205ENST00000549034 PLXNA4Q9HCM2 1894 aa10.42□□□□□ -0.74
RAB5B-205ENST00000549034 F8W810 466 aa10.42□□□□□ -0.74
RAB5B-205ENST00000549034 XPOTO43592 962 aaKnown RBP10.42□□□□□ -0.74
RAB5B-205ENST00000549034 B3GAT3O94766 335 aa10.42□□□□□ -0.74
RAB5B-205ENST00000549034 IL18RAPO95256 599 aa10.42□□□□□ -0.74
RAB5B-205ENST00000549034 ADRB2P07550 413 aa10.42□□□□□ -0.74
RAB5B-205ENST00000549034 POU5F1Q01860 360 aaKnown RBP10.42□□□□□ -0.74
RAB5B-205ENST00000549034 UBE3AQ05086 875 aa10.42□□□□□ -0.74
RAB5B-205ENST00000549034 SOX4Q06945 474 aaPredicted RBP10.42□□□□□ -0.74
RAB5B-205ENST00000549034 ADAM9Q13443 819 aa10.42□□□□□ -0.74
RAB5B-205ENST00000549034 STIM1Q13586 685 aa10.42□□□□□ -0.74
RAB5B-205ENST00000549034 MORC3Q14149 939 aa10.42□□□□□ -0.74
RAB5B-205ENST00000549034 HSP90AA2PQ14568 343 aaPredicted RBP10.42□□□□□ -0.74
RAB5B-205ENST00000549034 BMS1Q14692 1282 aaKnown RBP10.42□□□□□ -0.74
RAB5B-205ENST00000549034 ZBTB6Q15916 424 aa10.42□□□□□ -0.74
RAB5B-205ENST00000549034 TMC7Q7Z402 723 aa10.42□□□□□ -0.74
RAB5B-205ENST00000549034 DDX53Q86TM3 631 aaKnown RBP10.42□□□□□ -0.74
RAB5B-205ENST00000549034 TMEM173Q86WV6 379 aaPredicted RBP10.42□□□□□ -0.74
RAB5B-205ENST00000549034 CBWD2Q8IUF1 395 aa10.42□□□□□ -0.74
RAB5B-205ENST00000549034 VPS52Q8N1B4 723 aa10.42□□□□□ -0.74
RAB5B-205ENST00000549034 HASPINQ8TF76 798 aa10.42□□□□□ -0.74
RAB5B-205ENST00000549034 CACTINQ8WUQ7 758 aaKnown RBP10.42□□□□□ -0.74
RAB5B-205ENST00000549034 BCL7CQ8WUZ0 217 aaPredicted RBP10.42□□□□□ -0.74
RAB5B-205ENST00000549034 MRPL38Q96DV4 380 aaKnown RBP10.42□□□□□ -0.74
RAB5B-205ENST00000549034 DDX27Q96GQ7 796 aaKnown RBP10.42□□□□□ -0.74
RAB5B-205ENST00000549034 UROC1Q96N76 676 aa10.42□□□□□ -0.74
RAB5B-205ENST00000549034 TSPAN18Q96SJ8 248 aa10.42□□□□□ -0.74
RAB5B-205ENST00000549034 LMAN2LQ9H0V9 348 aa10.42□□□□□ -0.74
RAB5B-205ENST00000549034 NUP62CLQ9H1M0 184 aa10.42□□□□□ -0.74
RAB5B-205ENST00000549034 PDE11AQ9HCR9 933 aa10.42□□□□□ -0.74
RAB5B-205ENST00000549034 UBQLN1Q9UMX0 589 aaKnown RBP10.42□□□□□ -0.74
RAB5B-205ENST00000549034 TRAF3IP3Q9Y228 551 aa10.42□□□□□ -0.74
RAB5B-205ENST00000549034 ANK1P16157 1881 aa10.41□□□□□ -0.74
RAB5B-205ENST00000549034 PODXLO00592 558 aa10.41□□□□□ -0.74
RAB5B-205ENST00000549034 NR3C1P04150 777 aa10.41□□□□□ -0.74
RAB5B-205ENST00000549034 POU3F3P20264 500 aaPredicted RBP10.41□□□□□ -0.74
RAB5B-205ENST00000549034 IGFBP6P24592 240 aaPredicted RBP10.41□□□□□ -0.74
RAB5B-205ENST00000549034 RPL13P26373 211 aaKnown RBP10.41□□□□□ -0.74
RAB5B-205ENST00000549034 RPL9P32969 192 aaKnown RBP10.41□□□□□ -0.74
RAB5B-205ENST00000549034 IRS1P35568 1242 aa10.41□□□□□ -0.74
RAB5B-205ENST00000549034 GUCY2FP51841 1108 aa10.41□□□□□ -0.74
RAB5B-205ENST00000549034 CAMK1Q14012 370 aa10.41□□□□□ -0.74
RAB5B-205ENST00000549034 TMEM132DQ14C87 1099 aa10.41□□□□□ -0.74
RAB5B-205ENST00000549034 SURF1Q15526 300 aa10.41□□□□□ -0.74
RAB5B-205ENST00000549034 SNRNP35Q16560 246 aaKnown RBP10.41□□□□□ -0.74
RAB5B-205ENST00000549034 UPP1Q16831 310 aa10.41□□□□□ -0.74
RAB5B-205ENST00000549034 CEP135Q66GS9 1140 aa10.41□□□□□ -0.74
RAB5B-205ENST00000549034 ANKRD40Q6AI12 368 aa10.41□□□□□ -0.74
RAB5B-205ENST00000549034 KLHL10Q6JEL2 608 aa10.41□□□□□ -0.74
RAB5B-205ENST00000549034 TAS1R1Q7RTX1 841 aa10.41□□□□□ -0.74
RAB5B-205ENST00000549034 RBM23Q86U06 439 aaKnown RBP10.41□□□□□ -0.74
RAB5B-205ENST00000549034 CEP57Q86XR8 500 aa10.41□□□□□ -0.74
RAB5B-205ENST00000549034 C12orf56Q8IXR9 622 aa10.41□□□□□ -0.74
RAB5B-205ENST00000549034 ADSSL1Q8N142 457 aa10.41□□□□□ -0.74
RAB5B-205ENST00000549034 TMEM130Q8N3G9 435 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms