RNA–Protein interactions for RNA: ENST00000548836.1

USP15-210, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 3

Gene USP15, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-210ENST00000548836 PLEKHG4BQ96PX9 1271 aa6.67□□□□□ -1.34
USP15-210ENST00000548836 NUP88Q99567 741 aaPredicted RBP6.67□□□□□ -1.34
USP15-210ENST00000548836 CSRNP2Q9H175 543 aa6.67□□□□□ -1.34
USP15-210ENST00000548836 ZIM2Q9NZV7 527 aa6.67□□□□□ -1.34
USP15-210ENST00000548836 SORCS3Q9UPU3 1222 aa6.67□□□□□ -1.34
USP15-210ENST00000548836 CLCA2Q9UQC9 943 aa6.67□□□□□ -1.34
USP15-210ENST00000548836 ANKRD6Q9Y2G4 727 aa6.67□□□□□ -1.34
USP15-210ENST00000548836 LRRC14BA6NHZ5 514 aa6.66□□□□□ -1.34
USP15-210ENST00000548836 TRIM24O15164 1050 aa6.66□□□□□ -1.34
USP15-210ENST00000548836 IL33O95760 270 aa6.66□□□□□ -1.34
USP15-210ENST00000548836 UBXN2BQ14CS0 331 aa6.66□□□□□ -1.34
USP15-210ENST00000548836 NFE2Q16621 373 aaPredicted RBP6.66□□□□□ -1.34
USP15-210ENST00000548836 FLYWCH1Q4VC44 716 aa6.66□□□□□ -1.34
USP15-210ENST00000548836 TPH2Q8IWU9 490 aa6.66□□□□□ -1.34
USP15-210ENST00000548836 JPH3Q8WXH2 748 aaPredicted RBP6.66□□□□□ -1.34
USP15-210ENST00000548836 CLPTM1LQ96KA5 538 aa6.66□□□□□ -1.34
USP15-210ENST00000548836 CAMKK2Q96RR4 588 aa6.66□□□□□ -1.34
USP15-210ENST00000548836 DKK2Q9UBU2 259 aa6.66□□□□□ -1.34
USP15-210ENST00000548836 CFAP20Q9Y6A4 193 aaKnown RBP6.66□□□□□ -1.34
USP15-210ENST00000548836 TCRBV7S2A1N4TA0A589 114 aa6.65□□□□□ -1.34
USP15-210ENST00000548836 NT5C1B-RDH14C9J2C7 533 aa6.65□□□□□ -1.34
USP15-210ENST00000548836 PRPF3O43395 683 aaKnown RBP6.65□□□□□ -1.34
USP15-210ENST00000548836 NARSO43776 548 aaKnown RBP6.65□□□□□ -1.34
USP15-210ENST00000548836 AKAP5P24588 427 aa6.65□□□□□ -1.34
USP15-210ENST00000548836 RNASE9P60153 205 aaKnown RBP6.65□□□□□ -1.34
USP15-210ENST00000548836 PDCD4Q53EL6 469 aaKnown RBP6.65□□□□□ -1.34
USP15-210ENST00000548836 ATAT1Q5SQI0 421 aa6.65□□□□□ -1.34
USP15-210ENST00000548836 AGAP9Q5VTM2 703 aa6.65□□□□□ -1.34
USP15-210ENST00000548836 DBX2Q6ZNG2 339 aa6.65□□□□□ -1.34
USP15-210ENST00000548836 LRRC55Q6ZSA7 311 aa6.65□□□□□ -1.34
USP15-210ENST00000548836 RHOUQ7L0Q8 258 aa6.65□□□□□ -1.34
USP15-210ENST00000548836 VPS11Q9H270 941 aa6.65□□□□□ -1.34
USP15-210ENST00000548836 PARPBPQ9NWS1 579 aa6.65□□□□□ -1.34
USP15-210ENST00000548836 POGKQ9P215 609 aa6.65□□□□□ -1.34
USP15-210ENST00000548836 ZNF180Q9UJW8 692 aa6.65□□□□□ -1.34
USP15-210ENST00000548836 EID1Q9Y6B2 187 aa6.65□□□□□ -1.34
USP15-210ENST00000548836 E2F8A0AVK6 867 aa6.64□□□□□ -1.35
USP15-210ENST00000548836 RFPL1O75677 317 aa6.64□□□□□ -1.35
USP15-210ENST00000548836 SCAF4O95104 1147 aaKnown RBP6.64□□□□□ -1.35
USP15-210ENST00000548836 ELANEP08246 267 aa6.64□□□□□ -1.35
USP15-210ENST00000548836 SNAPC2Q13487 334 aa6.64□□□□□ -1.35
USP15-210ENST00000548836 KHDC1Q4VXA5 237 aaKnown RBP6.64□□□□□ -1.35
USP15-210ENST00000548836 B3GNT9Q6UX72 402 aa6.64□□□□□ -1.35
USP15-210ENST00000548836 MED25Q71SY5 747 aa6.64□□□□□ -1.35
USP15-210ENST00000548836 DRC7Q8IY82 874 aa6.64□□□□□ -1.35
USP15-210ENST00000548836 CPT1CQ8TCG5 803 aa6.64□□□□□ -1.35
USP15-210ENST00000548836 HPS3Q969F9 1004 aa6.64□□□□□ -1.35
USP15-210ENST00000548836 VRK1Q99986 396 aaPredicted RBP6.64□□□□□ -1.35
USP15-210ENST00000548836 C11orf54Q9H0W9 315 aaPredicted RBP6.64□□□□□ -1.35
USP15-210ENST00000548836 ANLNQ9NQW6 1124 aa6.64□□□□□ -1.35
USP15-210ENST00000548836 SLC2A4RGQ9NR83 387 aa6.64□□□□□ -1.35
USP15-210ENST00000548836 CALCOCO1Q9P1Z2 691 aa6.64□□□□□ -1.35
USP15-210ENST00000548836 PNMA8BQ9ULN7 279 aaPredicted RBP6.64□□□□□ -1.35
USP15-210ENST00000548836 MARCH11A6NNE9 402 aa6.63□□□□□ -1.35
USP15-210ENST00000548836 NPIPB8E9PQR5 432 aa6.63□□□□□ -1.35
USP15-210ENST00000548836 GRM6O15303 877 aa6.63□□□□□ -1.35
USP15-210ENST00000548836 TEX33O43247 280 aa6.63□□□□□ -1.35
USP15-210ENST00000548836 POMCP01189 267 aa6.63□□□□□ -1.35
USP15-210ENST00000548836 MGAT1P26572 445 aa6.63□□□□□ -1.35
USP15-210ENST00000548836 ZNF267Q14586 743 aaPredicted RBP6.63□□□□□ -1.35
USP15-210ENST00000548836 RAB39AQ14964 217 aa6.63□□□□□ -1.35
USP15-210ENST00000548836 EPM2AIP1Q7L775 607 aaPredicted RBP6.63□□□□□ -1.35
USP15-210ENST00000548836 GDF7Q7Z4P5 450 aa6.63□□□□□ -1.35
USP15-210ENST00000548836 TTC7BQ86TV6 843 aa6.63□□□□□ -1.35
USP15-210ENST00000548836 IL17RDQ8NFM7 739 aa6.63□□□□□ -1.35
USP15-210ENST00000548836 GSTO2Q9H4Y5 243 aa6.63□□□□□ -1.35
USP15-210ENST00000548836 TRPM5Q9NZQ8 1165 aa6.63□□□□□ -1.35
USP15-210ENST00000548836 VSX1Q9NZR4 365 aaPredicted RBP6.63□□□□□ -1.35
USP15-210ENST00000548836 EIF2B4Q9UI10 523 aaKnown RBP6.63□□□□□ -1.35
USP15-210ENST00000548836 PRSS29PA6NIE9 313 aa6.62□□□□□ -1.35
USP15-210ENST00000548836 F2RL2O00254 374 aa6.62□□□□□ -1.35
USP15-210ENST00000548836 PEX11BO96011 259 aa6.62□□□□□ -1.35
USP15-210ENST00000548836 S100BP04271 92 aaPredicted RBP6.62□□□□□ -1.35
USP15-210ENST00000548836 ITGB1P05556 798 aa6.62□□□□□ -1.35
USP15-210ENST00000548836 MALP21145 153 aa6.62□□□□□ -1.35
USP15-210ENST00000548836 LPOP22079 712 aaPredicted RBP6.62□□□□□ -1.35
USP15-210ENST00000548836 GCSHP23434 173 aa6.62□□□□□ -1.35
USP15-210ENST00000548836 MAP2K6P52564 334 aa6.62□□□□□ -1.35
USP15-210ENST00000548836 SLFN5Q08AF3 891 aa6.62□□□□□ -1.35
USP15-210ENST00000548836 TUBA3CQ13748 450 aa6.62□□□□□ -1.35
USP15-210ENST00000548836 LSM12Q3MHD2 195 aaKnown RBP6.62□□□□□ -1.35
USP15-210ENST00000548836 TUBA3EQ6PEY2 450 aa6.62□□□□□ -1.35
USP15-210ENST00000548836 RSPH3Q86UC2 560 aa6.62□□□□□ -1.35
USP15-210ENST00000548836 RHOT2Q8IXI1 618 aa6.62□□□□□ -1.35
USP15-210ENST00000548836 MVB12AQ96EY5 273 aa6.62□□□□□ -1.35
USP15-210ENST00000548836 DCLRE1CQ96SD1 692 aaKnown RBP6.62□□□□□ -1.35
USP15-210ENST00000548836 KLHL11Q9NVR0 708 aa6.62□□□□□ -1.35
USP15-210ENST00000548836 USP15Q9Y4E8 981 aaPredicted RBP6.62□□□□□ -1.35
USP15-210ENST00000548836 NCR1O76036 304 aa6.61□□□□□ -1.35
USP15-210ENST00000548836 SCGB1D2O95969 90 aa6.61□□□□□ -1.35
USP15-210ENST00000548836 ALDH2P05091 517 aa6.61□□□□□ -1.35
USP15-210ENST00000548836 TACR2P21452 398 aa6.61□□□□□ -1.35
USP15-210ENST00000548836 NOMO3P69849 1222 aa6.61□□□□□ -1.35
USP15-210ENST00000548836 ZXDAP98168 799 aa6.61□□□□□ -1.35
USP15-210ENST00000548836 PGS1Q32NB8 556 aa6.61□□□□□ -1.35
USP15-210ENST00000548836 NOMO2Q5JPE7 1267 aa6.61□□□□□ -1.35
USP15-210ENST00000548836 PPP4R3AQ6IN85 833 aa6.61□□□□□ -1.35
USP15-210ENST00000548836 MRGPREQ86SM8 312 aa6.61□□□□□ -1.35
USP15-210ENST00000548836 ZNF276Q8N554 614 aa6.61□□□□□ -1.35
USP15-210ENST00000548836 SLC25A43Q8WUT9 341 aaPredicted RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms