RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 STRA6Q9BX79 667 aa24.62■■□□□ 1.53
NPAS3-206ENST00000548645 RPL26L1Q9UNX3 145 aaKnown RBP24.62■■□□□ 1.53
NPAS3-206ENST00000548645 GREB1LQ9C091 1923 aaPredicted RBP24.61■■□□□ 1.53
NPAS3-206ENST00000548645 IGLV3-22A0A075B6J6 115 aa24.61■■□□□ 1.53
NPAS3-206ENST00000548645 DPPA5A6NC42 116 aa24.61■■□□□ 1.53
NPAS3-206ENST00000548645 MUTP22033 750 aa24.61■■□□□ 1.53
NPAS3-206ENST00000548645 VPS41P49754 854 aa24.61■■□□□ 1.53
NPAS3-206ENST00000548645 PCIF1Q9H4Z3 704 aa24.61■■□□□ 1.53
NPAS3-206ENST00000548645 NYAP2Q9P242 653 aa24.61■■□□□ 1.53
NPAS3-206ENST00000548645 PPP2R5CQ13362 524 aa24.61■■□□□ 1.53
NPAS3-206ENST00000548645 CEP128Q6ZU80 1094 aa24.61■■□□□ 1.53
NPAS3-206ENST00000548645 KIAA0825Q8IV33 1275 aa24.61■■□□□ 1.53
NPAS3-206ENST00000548645 CNBD1Q8NA66 436 aa24.61■■□□□ 1.53
NPAS3-206ENST00000548645 ASAP3Q8TDY4 903 aa24.61■■□□□ 1.53
NPAS3-206ENST00000548645 C9orf72Q96LT7 481 aa24.61■■□□□ 1.53
NPAS3-206ENST00000548645 EIF4E1BA6NMX2 242 aaKnown RBP24.6■■□□□ 1.53
NPAS3-206ENST00000548645 ABHD2P08910 425 aa24.6■■□□□ 1.53
NPAS3-206ENST00000548645 FBXO41Q8TF61 875 aa24.6■■□□□ 1.53
NPAS3-206ENST00000548645 SLC7A6OSQ96CW6 309 aaPredicted RBP24.6■■□□□ 1.53
NPAS3-206ENST00000548645 LRRC4BQ9NT99 713 aa24.6■■□□□ 1.53
NPAS3-206ENST00000548645 PSMD10O75832 226 aa24.6■■□□□ 1.53
NPAS3-206ENST00000548645 GM2AP17900 193 aa24.6■■□□□ 1.53
NPAS3-206ENST00000548645 MFAP3P55082 362 aa24.6■■□□□ 1.53
NPAS3-206ENST00000548645 GRIPAP1Q4V328 841 aa24.6■■□□□ 1.53
NPAS3-206ENST00000548645 ZNF365Q70YC5 407 aa24.6■■□□□ 1.53
NPAS3-206ENST00000548645 PPM1KQ8N3J5 372 aa24.6■■□□□ 1.53
NPAS3-206ENST00000548645 CCDC89Q8N998 374 aa24.6■■□□□ 1.53
NPAS3-206ENST00000548645 ZBTB10Q96DT7 871 aa24.6■■□□□ 1.53
NPAS3-206ENST00000548645 MXI1P50539 228 aa24.59■■□□□ 1.53
NPAS3-206ENST00000548645 PRELPP51888 382 aa24.59■■□□□ 1.53
NPAS3-206ENST00000548645 CENPCQ03188 943 aa24.59■■□□□ 1.53
NPAS3-206ENST00000548645 SPDYAQ5MJ70 313 aa24.59■■□□□ 1.53
NPAS3-206ENST00000548645 TRABD2AQ86V40 505 aa24.59■■□□□ 1.53
NPAS3-206ENST00000548645 ARHGEF1Q92888 912 aaKnown RBP24.59■■□□□ 1.53
NPAS3-206ENST00000548645 TMEM206Q9H813 350 aa24.59■■□□□ 1.53
NPAS3-206ENST00000548645 ACP6Q9NPH0 428 aa24.59■■□□□ 1.53
NPAS3-206ENST00000548645 LMNAP02545 664 aaKnown RBP24.59■■□□□ 1.53
NPAS3-206ENST00000548645 ACADSP16219 412 aa24.59■■□□□ 1.53
NPAS3-206ENST00000548645 MAPK4P31152 587 aa24.59■■□□□ 1.53
NPAS3-206ENST00000548645 SLC18A1P54219 525 aa24.59■■□□□ 1.53
NPAS3-206ENST00000548645 CDR2Q01850 454 aa24.59■■□□□ 1.53
NPAS3-206ENST00000548645 RNASELQ05823 741 aaKnown RBP24.59■■□□□ 1.53
NPAS3-206ENST00000548645 IKQ13123 557 aaPredicted RBP24.59■■□□□ 1.53
NPAS3-206ENST00000548645 LBRQ14739 615 aaKnown RBP24.59■■□□□ 1.53
NPAS3-206ENST00000548645 RBBP5Q15291 538 aaKnown RBP24.59■■□□□ 1.53
NPAS3-206ENST00000548645 SLC30A10Q6XR72 485 aa24.59■■□□□ 1.53
NPAS3-206ENST00000548645 SBDSQ9Y3A5 250 aaKnown RBP eCLIP24.59■■□□□ 1.53
NPAS3-206ENST00000548645 K7ENM7 598 aa24.58■■□□□ 1.53
NPAS3-206ENST00000548645 PRPF4O43172 522 aaKnown RBP eCLIP24.58■■□□□ 1.53
NPAS3-206ENST00000548645 SPAG7O75391 227 aa24.58■■□□□ 1.53
NPAS3-206ENST00000548645 CYP11B1P15538 503 aa24.58■■□□□ 1.53
NPAS3-206ENST00000548645 ZNF449Q6P9G9 518 aa24.58■■□□□ 1.53
NPAS3-206ENST00000548645 DENND1AQ8TEH3 1009 aa24.58■■□□□ 1.53
NPAS3-206ENST00000548645 PARD3BQ8TEW8 1205 aa24.58■■□□□ 1.53
NPAS3-206ENST00000548645 SHC3Q92529 594 aa24.58■■□□□ 1.53
NPAS3-206ENST00000548645 KREMEN1Q96MU8 473 aa24.58■■□□□ 1.53
NPAS3-206ENST00000548645 TSC22D3Q99576 134 aa24.58■■□□□ 1.53
NPAS3-206ENST00000548645 ANAPC7Q9UJX3 599 aa24.58■■□□□ 1.53
NPAS3-206ENST00000548645 USP20Q9Y2K6 914 aa24.58■■□□□ 1.53
NPAS3-206ENST00000548645 SUGT1Q9Y2Z0 365 aa24.58■■□□□ 1.53
NPAS3-206ENST00000548645 C6orf229H3BNL8 230 aa24.58■■□□□ 1.53
NPAS3-206ENST00000548645 TRAFD1O14545 582 aaPredicted RBP24.58■■□□□ 1.53
NPAS3-206ENST00000548645 EDF1O60869 148 aaKnown RBP24.58■■□□□ 1.53
NPAS3-206ENST00000548645 T-ENOLP0DO92 83 aa24.58■■□□□ 1.53
NPAS3-206ENST00000548645 RRM1P23921 792 aa24.58■■□□□ 1.53
NPAS3-206ENST00000548645 EPHB2P29323 1055 aa24.58■■□□□ 1.53
NPAS3-206ENST00000548645 PTDSS1P48651 473 aaKnown RBP24.58■■□□□ 1.53
NPAS3-206ENST00000548645 MXRA7P84157 204 aa24.58■■□□□ 1.53
NPAS3-206ENST00000548645 ACAD10Q6JQN1 1059 aa24.58■■□□□ 1.53
NPAS3-206ENST00000548645 SLC30A9Q6PML9 568 aa24.58■■□□□ 1.53
NPAS3-206ENST00000548645 LRRC8CQ8TDW0 803 aa24.58■■□□□ 1.53
NPAS3-206ENST00000548645 CFAP57Q96MR6 1250 aa24.58■■□□□ 1.53
NPAS3-206ENST00000548645 FOXP3Q9BZS1 431 aa24.58■■□□□ 1.53
NPAS3-206ENST00000548645 EXOC1LA0A1B0GW35 172 aa24.58■■□□□ 1.52
NPAS3-206ENST00000548645 BIRC2Q13490 618 aa24.58■■□□□ 1.52
NPAS3-206ENST00000548645 PDK4Q16654 411 aa24.58■■□□□ 1.52
NPAS3-206ENST00000548645 C1orf220Q5T0J3 134 aa24.58■■□□□ 1.52
NPAS3-206ENST00000548645 THEMIS2Q5TEJ8 643 aa24.58■■□□□ 1.52
NPAS3-206ENST00000548645 IZUMO3Q5VZ72 239 aa24.58■■□□□ 1.52
NPAS3-206ENST00000548645 DNAJC9Q8WXX5 260 aa24.58■■□□□ 1.52
NPAS3-206ENST00000548645 WDR18Q9BV38 432 aa24.58■■□□□ 1.52
NPAS3-206ENST00000548645 SMG5Q9UPR3 1016 aaKnown RBP24.58■■□□□ 1.52
NPAS3-206ENST00000548645 ARHGEF35A5YM69 484 aa24.57■■□□□ 1.52
NPAS3-206ENST00000548645 NPTXRO95502 500 aa24.57■■□□□ 1.52
NPAS3-206ENST00000548645 MAGEA4P43358 317 aa24.57■■□□□ 1.52
NPAS3-206ENST00000548645 KLC1Q07866 573 aa24.57■■□□□ 1.52
NPAS3-206ENST00000548645 SGSM1Q2NKQ1 1148 aa24.57■■□□□ 1.52
NPAS3-206ENST00000548645 DCLRE1BQ9H816 532 aa24.57■■□□□ 1.52
NPAS3-206ENST00000548645 SLCO1B3Q9NPD5 702 aa24.57■■□□□ 1.52
NPAS3-206ENST00000548645 POLLQ9UGP5 575 aa24.57■■□□□ 1.52
NPAS3-206ENST00000548645 NEU2Q9Y3R4 380 aa24.57■■□□□ 1.52
NPAS3-206ENST00000548645 MYH11P35749 1972 aa24.57■■□□□ 1.52
NPAS3-206ENST00000548645 PMM2O15305 246 aa24.57■■□□□ 1.52
NPAS3-206ENST00000548645 GAS7O60861 476 aa24.57■■□□□ 1.52
NPAS3-206ENST00000548645 PDHA1P08559 390 aa24.57■■□□□ 1.52
NPAS3-206ENST00000548645 CYP4F22Q6NT55 531 aa24.57■■□□□ 1.52
NPAS3-206ENST00000548645 XXYLT1Q8NBI6 393 aa24.57■■□□□ 1.52
NPAS3-206ENST00000548645 SPOCK2Q92563 424 aa24.57■■□□□ 1.52
NPAS3-206ENST00000548645 SLC5A5Q92911 643 aa24.57■■□□□ 1.52
NPAS3-206ENST00000548645 TMEM117Q9H0C3 514 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms