RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 NAMPTP43490 491 aa18.14■□□□□ 0.49
SSH1-208ENST00000548522 BRCC3P46736 316 aa18.14■□□□□ 0.49
SSH1-208ENST00000548522 ECM1Q16610 540 aa18.14■□□□□ 0.49
SSH1-208ENST00000548522 NT5DC1Q5TFE4 455 aa18.14■□□□□ 0.49
SSH1-208ENST00000548522 CEP120Q8N960 986 aa18.14■□□□□ 0.49
SSH1-208ENST00000548522 DEPTORQ8TB45 409 aa18.14■□□□□ 0.49
SSH1-208ENST00000548522 RUBCNQ92622 972 aa18.14■□□□□ 0.49
SSH1-208ENST00000548522 DDX27Q96GQ7 796 aaKnown RBP18.14■□□□□ 0.49
SSH1-208ENST00000548522 SHDQ96IW2 340 aa18.14■□□□□ 0.49
SSH1-208ENST00000548522 NACC1Q96RE7 527 aa18.14■□□□□ 0.49
SSH1-208ENST00000548522 ADPGKQ9BRR6 497 aa18.14■□□□□ 0.49
SSH1-208ENST00000548522 PLA2G2FQ9BZM2 168 aa18.14■□□□□ 0.49
SSH1-208ENST00000548522 NOTCH4Q99466 2003 aa18.13■□□□□ 0.49
SSH1-208ENST00000548522 ARHGEF35A5YM69 484 aa18.13■□□□□ 0.49
SSH1-208ENST00000548522 POU2F2P09086 479 aa18.13■□□□□ 0.49
SSH1-208ENST00000548522 CEBPBP17676 345 aa18.13■□□□□ 0.49
SSH1-208ENST00000548522 SOX4Q06945 474 aaPredicted RBP18.13■□□□□ 0.49
SSH1-208ENST00000548522 ELAVL2Q12926 359 aaKnown RBP18.13■□□□□ 0.49
SSH1-208ENST00000548522 ANKRD1Q15327 319 aa18.13■□□□□ 0.49
SSH1-208ENST00000548522 POLR3CQ9BUI4 534 aaPredicted RBP18.13■□□□□ 0.49
SSH1-208ENST00000548522 LTB4R2Q9NPC1 389 aa18.13■□□□□ 0.49
SSH1-208ENST00000548522 FANCMQ8IYD8 2048 aa18.12■□□□□ 0.49
SSH1-208ENST00000548522 SHISA7A6NL88 538 aa18.12■□□□□ 0.49
SSH1-208ENST00000548522 FAM170BA6NMN3 283 aa18.12■□□□□ 0.49
SSH1-208ENST00000548522 TMEM189-UBE2V1I3L0A0 370 aa18.12■□□□□ 0.49
SSH1-208ENST00000548522 TARSP26639 723 aaKnown RBP18.12■□□□□ 0.49
SSH1-208ENST00000548522 PRKCQQ04759 706 aa18.12■□□□□ 0.49
SSH1-208ENST00000548522 TRIM29Q14134 588 aa18.12■□□□□ 0.49
SSH1-208ENST00000548522 UPP1Q16831 310 aa18.12■□□□□ 0.49
SSH1-208ENST00000548522 DCAF4L1Q3SXM0 396 aa18.12■□□□□ 0.49
SSH1-208ENST00000548522 C8orf34Q49A92 452 aa18.12■□□□□ 0.49
SSH1-208ENST00000548522 ATF7IP2Q5U623 682 aa18.12■□□□□ 0.49
SSH1-208ENST00000548522 PDXDC1Q6P996 788 aa18.12■□□□□ 0.49
SSH1-208ENST00000548522 TPRG1Q6ZUI0 275 aa18.12■□□□□ 0.49
SSH1-208ENST00000548522 DGLUCYQ7Z3D6 616 aa18.12■□□□□ 0.49
SSH1-208ENST00000548522 MCRS1Q96EZ8 462 aa18.12■□□□□ 0.49
SSH1-208ENST00000548522 BCO2Q9BYV7 579 aa18.12■□□□□ 0.49
SSH1-208ENST00000548522 MRPS23Q9Y3D9 190 aaKnown RBP18.12■□□□□ 0.49
SSH1-208ENST00000548522 KINO60870 393 aaKnown RBP18.11■□□□□ 0.49
SSH1-208ENST00000548522 RHOP08100 348 aa18.11■□□□□ 0.49
SSH1-208ENST00000548522 OR52Z1P0C646 297 aa18.11■□□□□ 0.49
SSH1-208ENST00000548522 RPA1P27694 616 aa18.11■□□□□ 0.49
SSH1-208ENST00000548522 ANAPC15P60006 121 aa18.11■□□□□ 0.49
SSH1-208ENST00000548522 ROR1Q01973 937 aa18.11■□□□□ 0.49
SSH1-208ENST00000548522 CSTF1Q05048 431 aaKnown RBP18.11■□□□□ 0.49
SSH1-208ENST00000548522 ZNF174Q15697 407 aa18.11■□□□□ 0.49
SSH1-208ENST00000548522 TSSK4Q6SA08 328 aa18.11■□□□□ 0.49
SSH1-208ENST00000548522 KCNH3Q9ULD8 1083 aa18.11■□□□□ 0.49
SSH1-208ENST00000548522 PATJQ8NI35 1801 aa18.11■□□□□ 0.49
SSH1-208ENST00000548522 MIA3Q5JRA6 1907 aa18.1■□□□□ 0.49
SSH1-208ENST00000548522 LAMTOR5O43504 91 aa18.1■□□□□ 0.49
SSH1-208ENST00000548522 FCARP24071 287 aa18.1■□□□□ 0.49
SSH1-208ENST00000548522 RBM25P49756 843 aaKnown RBP18.1■□□□□ 0.49
SSH1-208ENST00000548522 OSTNP61366 133 aa18.1■□□□□ 0.49
SSH1-208ENST00000548522 NBR1Q14596 966 aa18.1■□□□□ 0.49
SSH1-208ENST00000548522 UVSSAQ2YD98 709 aa18.1■□□□□ 0.49
SSH1-208ENST00000548522 TANGO2Q6ICL3 276 aa18.1■□□□□ 0.49
SSH1-208ENST00000548522 TCEAL4Q96EI5 215 aa18.1■□□□□ 0.49
SSH1-208ENST00000548522 ZMAT2Q96NC0 199 aaKnown RBP18.1■□□□□ 0.49
SSH1-208ENST00000548522 CDT1Q9H211 546 aa18.1■□□□□ 0.49
SSH1-208ENST00000548522 BHMT2Q9H2M3 363 aa18.1■□□□□ 0.49
SSH1-208ENST00000548522 HEBP1Q9NRV9 189 aa18.1■□□□□ 0.49
SSH1-208ENST00000548522 BACE2Q9Y5Z0 518 aa18.1■□□□□ 0.49
SSH1-208ENST00000548522 SPTBN2O15020 2390 aa18.1■□□□□ 0.49
SSH1-208ENST00000548522 SMIM28A0A1B0GU29 152 aa18.09■□□□□ 0.49
SSH1-208ENST00000548522 WDR27A2RRH5 827 aa18.09■□□□□ 0.49
SSH1-208ENST00000548522 MEFVO15553 781 aaPredicted RBP18.09■□□□□ 0.49
SSH1-208ENST00000548522 PFKPQ01813 784 aa18.09■□□□□ 0.49
SSH1-208ENST00000548522 GRM2Q14416 872 aa18.09■□□□□ 0.49
SSH1-208ENST00000548522 ZNF528Q3MIS6 628 aa18.09■□□□□ 0.49
SSH1-208ENST00000548522 VARS2Q5ST30 1063 aaKnown RBP18.09■□□□□ 0.49
SSH1-208ENST00000548522 TMEM130Q8N3G9 435 aa18.09■□□□□ 0.49
SSH1-208ENST00000548522 DLL3Q9NYJ7 618 aa18.09■□□□□ 0.49
SSH1-208ENST00000548522 FBXO4Q9UKT5 387 aa18.09■□□□□ 0.49
SSH1-208ENST00000548522 EPG5Q9HCE0 2579 aa18.08■□□□□ 0.49
SSH1-208ENST00000548522 ECI2O75521 394 aa18.08■□□□□ 0.48
SSH1-208ENST00000548522 SEC24AO95486 1093 aa18.08■□□□□ 0.48
SSH1-208ENST00000548522 CCR2P41597 374 aa18.08■□□□□ 0.48
SSH1-208ENST00000548522 ARPP19P56211 112 aa18.08■□□□□ 0.48
SSH1-208ENST00000548522 FZD5Q13467 585 aa18.08■□□□□ 0.48
SSH1-208ENST00000548522 PUM1Q14671 1186 aaKnown RBP eCLIP18.08■□□□□ 0.48
SSH1-208ENST00000548522 PPP2R5AQ15172 486 aa18.08■□□□□ 0.48
SSH1-208ENST00000548522 RSPO4Q2I0M5 234 aaPredicted RBP18.08■□□□□ 0.48
SSH1-208ENST00000548522 PRSS36Q5K4E3 855 aa18.08■□□□□ 0.48
SSH1-208ENST00000548522 SLC8B1Q6J4K2 584 aa18.08■□□□□ 0.48
SSH1-208ENST00000548522 ANKS3Q6ZW76 656 aa18.08■□□□□ 0.48
SSH1-208ENST00000548522 TAS1R3Q7RTX0 852 aa18.08■□□□□ 0.48
SSH1-208ENST00000548522 DAW1Q8N136 415 aa18.08■□□□□ 0.48
SSH1-208ENST00000548522 ERMNQ8TAM6 284 aa18.08■□□□□ 0.48
SSH1-208ENST00000548522 IFT74Q96LB3 600 aa18.08■□□□□ 0.48
SSH1-208ENST00000548522 UROC1Q96N76 676 aa18.08■□□□□ 0.48
SSH1-208ENST00000548522 IPO9Q96P70 1041 aaKnown RBP18.08■□□□□ 0.48
SSH1-208ENST00000548522 OSBPL6Q9BZF3 934 aa18.08■□□□□ 0.48
SSH1-208ENST00000548522 ZFHX4Q86UP3 3567 aa18.07■□□□□ 0.48
SSH1-208ENST00000548522 NCANO14594 1321 aa18.07■□□□□ 0.48
SSH1-208ENST00000548522 ARHGEF37A1IGU5 675 aa18.07■□□□□ 0.48
SSH1-208ENST00000548522 PODXLO00592 558 aa18.07■□□□□ 0.48
SSH1-208ENST00000548522 SPTLC1O15269 473 aa18.07■□□□□ 0.48
SSH1-208ENST00000548522 CCT6AP40227 531 aaKnown RBP18.07■□□□□ 0.48
SSH1-208ENST00000548522 GRM5P41594 1212 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms