RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 PRPF6O94906 941 aaKnown RBP3.48□□□□□ -1.85
DEPDC4-204ENST00000547823 ATP2B1P20020 1258 aa3.48□□□□□ -1.85
DEPDC4-204ENST00000547823 IGFALSP35858 605 aa3.48□□□□□ -1.85
DEPDC4-204ENST00000547823 MPLP40238 635 aa3.48□□□□□ -1.85
DEPDC4-204ENST00000547823 CASRP41180 1078 aa3.48□□□□□ -1.85
DEPDC4-204ENST00000547823 RGS19P49795 217 aa3.48□□□□□ -1.85
DEPDC4-204ENST00000547823 NRG3P56975 720 aa3.48□□□□□ -1.85
DEPDC4-204ENST00000547823 SPDYE7PQ495Y7 208 aa3.48□□□□□ -1.85
DEPDC4-204ENST00000547823 EFCAB12Q6NXP0 572 aa3.48□□□□□ -1.85
DEPDC4-204ENST00000547823 ZCCHC8Q6NZY4 707 aaKnown RBP3.48□□□□□ -1.85
DEPDC4-204ENST00000547823 ABHD17CQ6PCB6 329 aa3.48□□□□□ -1.85
DEPDC4-204ENST00000547823 TAS1R1Q7RTX1 841 aa3.48□□□□□ -1.85
DEPDC4-204ENST00000547823 C1QL2Q7Z5L3 287 aa3.48□□□□□ -1.85
DEPDC4-204ENST00000547823 DDX17Q92841 729 aaKnown RBP3.48□□□□□ -1.85
DEPDC4-204ENST00000547823 SLC29A3Q9BZD2 475 aa3.48□□□□□ -1.85
DEPDC4-204ENST00000547823 RNF7Q9UBF6 113 aa3.48□□□□□ -1.85
DEPDC4-204ENST00000547823 PCDHB6Q9Y5E3 794 aa3.48□□□□□ -1.85
DEPDC4-204ENST00000547823 MYO5BQ9ULV0 1848 aa3.48□□□□□ -1.85
DEPDC4-204ENST00000547823 LAMC1P11047 1609 aa3.48□□□□□ -1.85
DEPDC4-204ENST00000547823 MBD5Q9P267 1494 aa3.47□□□□□ -1.85
DEPDC4-204ENST00000547823 DCCP43146 1447 aa3.47□□□□□ -1.85
DEPDC4-204ENST00000547823 MST1RQ04912 1400 aa3.47□□□□□ -1.85
DEPDC4-204ENST00000547823 PTPDC1A2A3K4 754 aa3.47□□□□□ -1.85
DEPDC4-204ENST00000547823 LEFTY2O00292 366 aa3.47□□□□□ -1.85
DEPDC4-204ENST00000547823 DVL2O14641 736 aa3.47□□□□□ -1.85
DEPDC4-204ENST00000547823 CDKL5O76039 1030 aa3.47□□□□□ -1.85
DEPDC4-204ENST00000547823 SPDEFO95238 335 aa3.47□□□□□ -1.85
DEPDC4-204ENST00000547823 ITGAMP11215 1152 aa3.47□□□□□ -1.85
DEPDC4-204ENST00000547823 FLT3P36888 993 aa3.47□□□□□ -1.85
DEPDC4-204ENST00000547823 CACNA2D1P54289 1103 aa3.47□□□□□ -1.85
DEPDC4-204ENST00000547823 TP53BP2Q13625 1128 aa3.47□□□□□ -1.85
DEPDC4-204ENST00000547823 ZNF169Q14929 603 aaPredicted RBP3.47□□□□□ -1.85
DEPDC4-204ENST00000547823 LCE1AQ5T7P2 110 aa3.47□□□□□ -1.85
DEPDC4-204ENST00000547823 SP5Q6BEB4 398 aaPredicted RBP3.47□□□□□ -1.85
DEPDC4-204ENST00000547823 PTF1AQ7RTS3 328 aa3.47□□□□□ -1.85
DEPDC4-204ENST00000547823 Q8N9P0 234 aaPredicted RBP3.47□□□□□ -1.85
DEPDC4-204ENST00000547823 PIK3C3Q8NEB9 887 aa3.47□□□□□ -1.85
DEPDC4-204ENST00000547823 ZFP28Q8NHY6 868 aa3.47□□□□□ -1.85
DEPDC4-204ENST00000547823 ASB10Q8WXI3 467 aa3.47□□□□□ -1.85
DEPDC4-204ENST00000547823 CDC5LQ99459 802 aaKnown RBP3.47□□□□□ -1.85
DEPDC4-204ENST00000547823 HEPHQ9BQS7 1158 aa3.47□□□□□ -1.85
DEPDC4-204ENST00000547823 SOX7Q9BT81 388 aa3.47□□□□□ -1.85
DEPDC4-204ENST00000547823 TRIM39Q9HCM9 518 aa3.47□□□□□ -1.85
DEPDC4-204ENST00000547823 ALG13Q9NP73 1137 aaKnown RBP3.47□□□□□ -1.85
DEPDC4-204ENST00000547823 SAMD15Q9P1V8 674 aa3.47□□□□□ -1.85
DEPDC4-204ENST00000547823 SLC17A6Q9P2U8 582 aa3.47□□□□□ -1.85
DEPDC4-204ENST00000547823 CFDP1Q9UEE9 299 aaPredicted RBP3.47□□□□□ -1.85
DEPDC4-204ENST00000547823 SPO11Q9Y5K1 396 aa3.47□□□□□ -1.85
DEPDC4-204ENST00000547823 CCDC18Q5T9S5 1454 aa3.47□□□□□ -1.85
DEPDC4-204ENST00000547823 RREB1Q92766 1687 aa3.46□□□□□ -1.85
DEPDC4-204ENST00000547823 DISP2A7MBM2 1401 aa3.46□□□□□ -1.86
DEPDC4-204ENST00000547823 EIF2AK4Q9P2K8 1649 aaKnown RBP3.46□□□□□ -1.86
DEPDC4-204ENST00000547823 UNC119BA6NIH7 251 aa3.46□□□□□ -1.86
DEPDC4-204ENST00000547823 SEC24DO94855 1032 aaPredicted RBP3.46□□□□□ -1.86
DEPDC4-204ENST00000547823 APOL3O95236 402 aa3.46□□□□□ -1.86
DEPDC4-204ENST00000547823 LY86O95711 162 aa3.46□□□□□ -1.86
DEPDC4-204ENST00000547823 ASLP04424 464 aa3.46□□□□□ -1.86
DEPDC4-204ENST00000547823 CFIP05156 583 aa3.46□□□□□ -1.86
DEPDC4-204ENST00000547823 CD40P25942 277 aa3.46□□□□□ -1.86
DEPDC4-204ENST00000547823 GTF2F1P35269 517 aaKnown RBP eCLIP3.46□□□□□ -1.86
DEPDC4-204ENST00000547823 ABCG1P45844 678 aa3.46□□□□□ -1.86
DEPDC4-204ENST00000547823 RARRES1P49788 294 aa3.46□□□□□ -1.86
DEPDC4-204ENST00000547823 MEF2AQ02078 507 aaPredicted RBP3.46□□□□□ -1.86
DEPDC4-204ENST00000547823 RBL2Q08999 1139 aa3.46□□□□□ -1.86
DEPDC4-204ENST00000547823 SERINC3Q13530 473 aa3.46□□□□□ -1.86
DEPDC4-204ENST00000547823 PDCD4Q53EL6 469 aaKnown RBP3.46□□□□□ -1.86
DEPDC4-204ENST00000547823 LMBR1LQ6UX01 489 aa3.46□□□□□ -1.86
DEPDC4-204ENST00000547823 PDZD4Q76G19 769 aaPredicted RBP3.46□□□□□ -1.86
DEPDC4-204ENST00000547823 KRT27Q7Z3Y8 459 aa3.46□□□□□ -1.86
DEPDC4-204ENST00000547823 SLC44A3Q8N4M1 653 aa3.46□□□□□ -1.86
DEPDC4-204ENST00000547823 ZNF366Q8N895 744 aa3.46□□□□□ -1.86
DEPDC4-204ENST00000547823 JMYQ8N9B5 988 aa3.46□□□□□ -1.86
DEPDC4-204ENST00000547823 ZNF384Q8TF68 577 aa3.46□□□□□ -1.86
DEPDC4-204ENST00000547823 FUBP1Q96AE4 644 aaKnown RBP3.46□□□□□ -1.86
DEPDC4-204ENST00000547823 ARMC5Q96C12 935 aa3.46□□□□□ -1.86
DEPDC4-204ENST00000547823 ADAM2Q99965 735 aa3.46□□□□□ -1.86
DEPDC4-204ENST00000547823 MYL10Q9BUA6 226 aa3.46□□□□□ -1.86
DEPDC4-204ENST00000547823 LRIT1Q9P2V4 623 aa3.46□□□□□ -1.86
DEPDC4-204ENST00000547823 NUP188Q5SRE5 1749 aa3.46□□□□□ -1.86
DEPDC4-204ENST00000547823 MYOM2P54296 1465 aa3.46□□□□□ -1.86
DEPDC4-204ENST00000547823 ZNF644Q9H582 1327 aaPredicted RBP3.45□□□□□ -1.86
DEPDC4-204ENST00000547823 ARHGAP31Q2M1Z3 1444 aa3.45□□□□□ -1.86
DEPDC4-204ENST00000547823 ADGRB3O60242 1522 aa3.45□□□□□ -1.86
DEPDC4-204ENST00000547823 SHANK3Q9BYB0 1731 aa3.45□□□□□ -1.86
DEPDC4-204ENST00000547823 CCDC85CA6NKD9 419 aa3.45□□□□□ -1.86
DEPDC4-204ENST00000547823 GLRX3O76003 335 aaKnown RBP3.45□□□□□ -1.86
DEPDC4-204ENST00000547823 CFBP00751 764 aa3.45□□□□□ -1.86
DEPDC4-204ENST00000547823 PTX3P26022 381 aaPredicted RBP3.45□□□□□ -1.86
DEPDC4-204ENST00000547823 PTH2RP49190 550 aa3.45□□□□□ -1.86
DEPDC4-204ENST00000547823 ZNF81P51508 661 aa3.45□□□□□ -1.86
DEPDC4-204ENST00000547823 APBA1Q02410 837 aa3.45□□□□□ -1.86
DEPDC4-204ENST00000547823 RESTQ13127 1097 aa3.45□□□□□ -1.86
DEPDC4-204ENST00000547823 RASA3Q14644 834 aa3.45□□□□□ -1.86
DEPDC4-204ENST00000547823 EZH2Q15910 746 aaKnown RBP3.45□□□□□ -1.86
DEPDC4-204ENST00000547823 BTNL9Q6UXG8 535 aa3.45□□□□□ -1.86
DEPDC4-204ENST00000547823 ESPNLQ6ZVH7 1005 aa3.45□□□□□ -1.86
DEPDC4-204ENST00000547823 FGD2Q7Z6J4 655 aa3.45□□□□□ -1.86
DEPDC4-204ENST00000547823 UNC5CLQ8IV45 518 aa3.45□□□□□ -1.86
DEPDC4-204ENST00000547823 GLB1L2Q8IW92 636 aa3.45□□□□□ -1.86
DEPDC4-204ENST00000547823 RSAD2Q8WXG1 361 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms