RNA–Protein interactions for RNA: ENST00000547758.1

CCDC59-202, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-202ENST00000547758 CHRDQ9H2X0 955 aa14.94□□□□□ -0.02
CCDC59-202ENST00000547758 NCOA5Q9HCD5 579 aaKnown RBP14.94□□□□□ -0.02
CCDC59-202ENST00000547758 GDE1Q9NZC3 331 aa14.94□□□□□ -0.02
CCDC59-202ENST00000547758 RGL1Q9NZL6 768 aa14.94□□□□□ -0.02
CCDC59-202ENST00000547758 NDRG2Q9UN36 371 aaKnown RBP14.94□□□□□ -0.02
CCDC59-202ENST00000547758 MRPS23Q9Y3D9 190 aaKnown RBP14.94□□□□□ -0.02
CCDC59-202ENST00000547758 SDK1Q7Z5N4 2213 aa14.93□□□□□ -0.02
CCDC59-202ENST00000547758 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.93□□□□□ -0.02
CCDC59-202ENST00000547758 ZBTB39O15060 712 aa14.93□□□□□ -0.02
CCDC59-202ENST00000547758 RETP07949 1114 aa14.93□□□□□ -0.02
CCDC59-202ENST00000547758 ELAVL2Q12926 359 aaKnown RBP14.93□□□□□ -0.02
CCDC59-202ENST00000547758 RAB33AQ14088 237 aa14.93□□□□□ -0.02
CCDC59-202ENST00000547758 PPP2R5DQ14738 602 aa14.93□□□□□ -0.02
CCDC59-202ENST00000547758 NPY5RQ15761 445 aa14.93□□□□□ -0.02
CCDC59-202ENST00000547758 SLC5A9Q2M3M2 681 aa14.93□□□□□ -0.02
CCDC59-202ENST00000547758 BLOC1S2Q6QNY1 142 aa14.93□□□□□ -0.02
CCDC59-202ENST00000547758 PRR23BQ6ZRT6 265 aa14.93□□□□□ -0.02
CCDC59-202ENST00000547758 ZNF687Q8N1G0 1237 aa14.93□□□□□ -0.02
CCDC59-202ENST00000547758 MCRS1Q96EZ8 462 aa14.93□□□□□ -0.02
CCDC59-202ENST00000547758 DYDC2Q96IM9 177 aa14.93□□□□□ -0.02
CCDC59-202ENST00000547758 IER2Q9BTL4 223 aa14.93□□□□□ -0.02
CCDC59-202ENST00000547758 AGXT2Q9BYV1 514 aa14.93□□□□□ -0.02
CCDC59-202ENST00000547758 ZSWIM4Q9H7M6 989 aa14.93□□□□□ -0.02
CCDC59-202ENST00000547758 A0A1B0GUA9 196 aa14.92□□□□□ -0.02
CCDC59-202ENST00000547758 MAN2B1O00754 1011 aa14.92□□□□□ -0.02
CCDC59-202ENST00000547758 RHOP08100 348 aa14.92□□□□□ -0.02
CCDC59-202ENST00000547758 OR1D2P34982 312 aa14.92□□□□□ -0.02
CCDC59-202ENST00000547758 CYP4A11Q02928 519 aa14.92□□□□□ -0.02
CCDC59-202ENST00000547758 SSRP1Q08945 709 aaKnown RBP14.92□□□□□ -0.02
CCDC59-202ENST00000547758 CTTNQ14247 550 aaKnown RBP14.92□□□□□ -0.02
CCDC59-202ENST00000547758 NCAPH2Q6IBW4 605 aa14.92□□□□□ -0.02
CCDC59-202ENST00000547758 TANGO2Q6ICL3 276 aa14.92□□□□□ -0.02
CCDC59-202ENST00000547758 GALNT17Q6IS24 598 aa14.92□□□□□ -0.02
CCDC59-202ENST00000547758 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.92□□□□□ -0.02
CCDC59-202ENST00000547758 RTL10Q7L3V2 364 aa14.92□□□□□ -0.02
CCDC59-202ENST00000547758 KRT25Q7Z3Z0 450 aa14.92□□□□□ -0.02
CCDC59-202ENST00000547758 ELSPBP1Q96BH3 223 aa14.92□□□□□ -0.02
CCDC59-202ENST00000547758 ATRXP46100 2492 aa14.91□□□□□ -0.02
CCDC59-202ENST00000547758 PTGESO14684 152 aa14.91□□□□□ -0.02
CCDC59-202ENST00000547758 DEXIO95424 95 aa14.91□□□□□ -0.02
CCDC59-202ENST00000547758 THP07101 528 aa14.91□□□□□ -0.02
CCDC59-202ENST00000547758 GCFC2P16383 781 aaKnown RBP14.91□□□□□ -0.02
CCDC59-202ENST00000547758 CEBPBP17676 345 aa14.91□□□□□ -0.02
CCDC59-202ENST00000547758 GLRA2P23416 452 aa14.91□□□□□ -0.02
CCDC59-202ENST00000547758 RPS6KB1P23443 525 aa14.91□□□□□ -0.02
CCDC59-202ENST00000547758 PDIA3P30101 505 aaKnown RBP14.91□□□□□ -0.02
CCDC59-202ENST00000547758 ARL2P36404 184 aa14.91□□□□□ -0.02
CCDC59-202ENST00000547758 CCR3P51677 355 aa14.91□□□□□ -0.02
CCDC59-202ENST00000547758 BMP2KLQ5H9B9 411 aa14.91□□□□□ -0.02
CCDC59-202ENST00000547758 PPP4R3AQ6IN85 833 aa14.91□□□□□ -0.02
CCDC59-202ENST00000547758 PRR23CQ6ZRP0 262 aa14.91□□□□□ -0.02
CCDC59-202ENST00000547758 HAS1Q92839 578 aa14.91□□□□□ -0.02
CCDC59-202ENST00000547758 KCNB2Q92953 911 aa14.91□□□□□ -0.02
CCDC59-202ENST00000547758 AVENQ9NQS1 362 aaPredicted RBP14.91□□□□□ -0.02
CCDC59-202ENST00000547758 SEMA4GQ9NTN9 838 aa14.91□□□□□ -0.02
CCDC59-202ENST00000547758 MTRRQ9UBK8 725 aa14.91□□□□□ -0.02
CCDC59-202ENST00000547758 CEP295Q9C0D2 2601 aa14.91□□□□□ -0.02
CCDC59-202ENST00000547758 TBX3O15119 743 aa14.9□□□□□ -0.02
CCDC59-202ENST00000547758 MARCH6O60337 910 aa14.9□□□□□ -0.02
CCDC59-202ENST00000547758 DGAT1O75907 488 aa14.9□□□□□ -0.02
CCDC59-202ENST00000547758 FGFR3P22607 806 aa14.9□□□□□ -0.02
CCDC59-202ENST00000547758 FCARP24071 287 aa14.9□□□□□ -0.02
CCDC59-202ENST00000547758 SPIRE1Q08AE8 756 aa14.9□□□□□ -0.02
CCDC59-202ENST00000547758 GRM2Q14416 872 aa14.9□□□□□ -0.02
CCDC59-202ENST00000547758 NAB2Q15742 525 aa14.9□□□□□ -0.02
CCDC59-202ENST00000547758 CSRP2Q16527 193 aa14.9□□□□□ -0.02
CCDC59-202ENST00000547758 NEK8Q86SG6 692 aa14.9□□□□□ -0.02
CCDC59-202ENST00000547758 TPH2Q8IWU9 490 aa14.9□□□□□ -0.02
CCDC59-202ENST00000547758 FAM177A1Q8N128 213 aaPredicted RBP14.9□□□□□ -0.02
CCDC59-202ENST00000547758 BRD9Q9H8M2 597 aa14.9□□□□□ -0.02
CCDC59-202ENST00000547758 CDY1Q9Y6F8 540 aa14.9□□□□□ -0.02
CCDC59-202ENST00000547758 CCDC194A0A1B0GVG4 234 aa14.89□□□□□ -0.03
CCDC59-202ENST00000547758 CCNT1O60563 726 aaKnown RBP14.89□□□□□ -0.03
CCDC59-202ENST00000547758 RECQL4O94761 1208 aa14.89□□□□□ -0.03
CCDC59-202ENST00000547758 SLITRK3O94933 977 aa14.89□□□□□ -0.03
CCDC59-202ENST00000547758 EVCP57679 992 aa14.89□□□□□ -0.03
CCDC59-202ENST00000547758 SIM2Q14190 667 aaPredicted RBP14.89□□□□□ -0.03
CCDC59-202ENST00000547758 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.89□□□□□ -0.03
CCDC59-202ENST00000547758 DDX1Q92499 740 aaKnown RBP14.89□□□□□ -0.03
CCDC59-202ENST00000547758 FAM3CQ92520 227 aa14.89□□□□□ -0.03
CCDC59-202ENST00000547758 PRIMPOLQ96LW4 560 aa14.89□□□□□ -0.03
CCDC59-202ENST00000547758 AIFM3Q96NN9 605 aa14.89□□□□□ -0.03
CCDC59-202ENST00000547758 TRMT61BQ9BVS5 477 aaKnown RBP14.89□□□□□ -0.03
CCDC59-202ENST00000547758 POLR3FQ9H1D9 316 aaPredicted RBP14.89□□□□□ -0.03
CCDC59-202ENST00000547758 CXCL16Q9H2A7 254 aa14.89□□□□□ -0.03
CCDC59-202ENST00000547758 LMAN1LQ9HAT1 526 aa14.89□□□□□ -0.03
CCDC59-202ENST00000547758 ZFP14Q9HCL3 533 aa14.89□□□□□ -0.03
CCDC59-202ENST00000547758 SNTG2Q9NY99 539 aa14.89□□□□□ -0.03
CCDC59-202ENST00000547758 ANGPTL2Q9UKU9 493 aa14.89□□□□□ -0.03
CCDC59-202ENST00000547758 SNX14Q9Y5W7 946 aa14.89□□□□□ -0.03
CCDC59-202ENST00000547758 FRYQ5TBA9 3013 aa14.89□□□□□ -0.03
CCDC59-202ENST00000547758 CITO14578 2027 aa14.88□□□□□ -0.03
CCDC59-202ENST00000547758 TMEM189-UBE2V1I3L0A0 370 aa14.88□□□□□ -0.03
CCDC59-202ENST00000547758 GDF9O60383 454 aa14.88□□□□□ -0.03
CCDC59-202ENST00000547758 PTPN2P17706 415 aa14.88□□□□□ -0.03
CCDC59-202ENST00000547758 SATB1Q01826 763 aa14.88□□□□□ -0.03
CCDC59-202ENST00000547758 FAM78AQ5JUQ0 283 aa14.88□□□□□ -0.03
CCDC59-202ENST00000547758 PRSS36Q5K4E3 855 aa14.88□□□□□ -0.03
CCDC59-202ENST00000547758 IRF7Q92985 503 aa14.88□□□□□ -0.03
CCDC59-202ENST00000547758 CCDC43Q96MW1 224 aaKnown RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms