RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 CCDC77Q9BR77 488 aa11.39□□□□□ -0.59
NPAS3-205ENST00000547068 CADM1Q9BY67 442 aaKnown RBP11.39□□□□□ -0.59
NPAS3-205ENST00000547068 VPS33BQ9H267 617 aa11.39□□□□□ -0.59
NPAS3-205ENST00000547068 CD209Q9NNX6 404 aa11.39□□□□□ -0.59
NPAS3-205ENST00000547068 DDX25Q9UHL0 483 aaKnown RBP11.39□□□□□ -0.59
NPAS3-205ENST00000547068 PDXKO00764 312 aa11.39□□□□□ -0.59
NPAS3-205ENST00000547068 EDF1O60869 148 aaKnown RBP11.39□□□□□ -0.59
NPAS3-205ENST00000547068 TBX10O75333 385 aa11.39□□□□□ -0.59
NPAS3-205ENST00000547068 SPAG7O75391 227 aa11.39□□□□□ -0.59
NPAS3-205ENST00000547068 NR3C1P04150 777 aa11.39□□□□□ -0.59
NPAS3-205ENST00000547068 COMTP21964 271 aa11.39□□□□□ -0.59
NPAS3-205ENST00000547068 TNNI2P48788 182 aa11.39□□□□□ -0.59
NPAS3-205ENST00000547068 ADCY7P51828 1080 aa11.39□□□□□ -0.59
NPAS3-205ENST00000547068 AP1B1Q10567 949 aa11.39□□□□□ -0.59
NPAS3-205ENST00000547068 SPARCL1Q14515 664 aa11.39□□□□□ -0.59
NPAS3-205ENST00000547068 MESDQ14696 234 aa11.39□□□□□ -0.59
NPAS3-205ENST00000547068 TMED2Q15363 201 aa11.39□□□□□ -0.59
NPAS3-205ENST00000547068 GSTA3Q16772 222 aa11.39□□□□□ -0.59
NPAS3-205ENST00000547068 PABPC1LQ4VXU2 614 aaKnown RBP11.39□□□□□ -0.59
NPAS3-205ENST00000547068 ACSBG2Q5FVE4 666 aa11.39□□□□□ -0.59
NPAS3-205ENST00000547068 HYIQ5T013 277 aa11.39□□□□□ -0.59
NPAS3-205ENST00000547068 RHBDF2Q6PJF5 856 aa11.39□□□□□ -0.59
NPAS3-205ENST00000547068 NCAPG2Q86XI2 1143 aa11.39□□□□□ -0.59
NPAS3-205ENST00000547068 DTX3LQ8TDB6 740 aa11.39□□□□□ -0.59
NPAS3-205ENST00000547068 ZNF526Q8TF50 670 aaPredicted RBP11.39□□□□□ -0.59
NPAS3-205ENST00000547068 STMN2Q93045 179 aa11.39□□□□□ -0.59
NPAS3-205ENST00000547068 ZNF184Q99676 751 aaPredicted RBP11.39□□□□□ -0.59
NPAS3-205ENST00000547068 DDX50Q9BQ39 737 aaKnown RBP11.39□□□□□ -0.59
NPAS3-205ENST00000547068 SYT11Q9BT88 431 aa11.39□□□□□ -0.59
NPAS3-205ENST00000547068 MXD3Q9BW11 206 aa11.39□□□□□ -0.59
NPAS3-205ENST00000547068 NINJ2Q9NZG7 142 aa11.39□□□□□ -0.59
NPAS3-205ENST00000547068 LARSQ9P2J5 1176 aaKnown RBP11.39□□□□□ -0.59
NPAS3-205ENST00000547068 PCDHB13Q9Y5F0 798 aa11.39□□□□□ -0.59
NPAS3-205ENST00000547068 POTEB3A0JP26 581 aa11.38□□□□□ -0.59
NPAS3-205ENST00000547068 POTECB2RU33 542 aa11.38□□□□□ -0.59
NPAS3-205ENST00000547068 CCDC22O60826 627 aa11.38□□□□□ -0.59
NPAS3-205ENST00000547068 PSMG1O95456 288 aa11.38□□□□□ -0.59
NPAS3-205ENST00000547068 ZCCHC18P0CG32 403 aa11.38□□□□□ -0.59
NPAS3-205ENST00000547068 SETSIPP0DME0 302 aa11.38□□□□□ -0.59
NPAS3-205ENST00000547068 RPL13P26373 211 aaKnown RBP11.38□□□□□ -0.59
NPAS3-205ENST00000547068 SCNN1BP51168 640 aa11.38□□□□□ -0.59
NPAS3-205ENST00000547068 HADHBP55084 474 aaKnown RBP11.38□□□□□ -0.59
NPAS3-205ENST00000547068 SLC45A4Q5BKX6 768 aa11.38□□□□□ -0.59
NPAS3-205ENST00000547068 POTEBQ6S5H4 581 aa11.38□□□□□ -0.59
NPAS3-205ENST00000547068 HS2ST1Q7LGA3 356 aa11.38□□□□□ -0.59
NPAS3-205ENST00000547068 NLRP9Q7RTR0 991 aa11.38□□□□□ -0.59
NPAS3-205ENST00000547068 RBM12BQ8IXT5 1001 aaKnown RBP11.38□□□□□ -0.59
NPAS3-205ENST00000547068 SYCP3Q8IZU3 236 aa11.38□□□□□ -0.59
NPAS3-205ENST00000547068 SNF8Q96H20 258 aa11.38□□□□□ -0.59
NPAS3-205ENST00000547068 SPATA16Q9BXB7 569 aa11.38□□□□□ -0.59
NPAS3-205ENST00000547068 WNT8AQ9H1J5 351 aa11.38□□□□□ -0.59
NPAS3-205ENST00000547068 DNAJC18Q9H819 358 aa11.38□□□□□ -0.59
NPAS3-205ENST00000547068 SAR1AQ9NR31 198 aa11.38□□□□□ -0.59
NPAS3-205ENST00000547068 SLC4A7Q9Y6M7 1214 aa11.38□□□□□ -0.59
NPAS3-205ENST00000547068 IRS2Q9Y4H2 1338 aa11.38□□□□□ -0.59
NPAS3-205ENST00000547068 ROBO3Q96MS0 1386 aa11.38□□□□□ -0.59
NPAS3-205ENST00000547068 SLC16A3O15427 465 aaKnown RBP11.38□□□□□ -0.59
NPAS3-205ENST00000547068 ZSCAN9O15535 394 aaPredicted RBP11.38□□□□□ -0.59
NPAS3-205ENST00000547068 CHRNB2P17787 502 aa11.38□□□□□ -0.59
NPAS3-205ENST00000547068 HOXD13P35453 343 aa11.38□□□□□ -0.59
NPAS3-205ENST00000547068 NT5C2P49902 561 aa11.38□□□□□ -0.59
NPAS3-205ENST00000547068 ITGA8P53708 1063 aa11.38□□□□□ -0.59
NPAS3-205ENST00000547068 MYBPC3Q14896 1274 aa11.38□□□□□ -0.59
NPAS3-205ENST00000547068 SIX1Q15475 284 aaPredicted RBP11.38□□□□□ -0.59
NPAS3-205ENST00000547068 ARSHQ5FYA8 562 aa11.38□□□□□ -0.59
NPAS3-205ENST00000547068 TMEM63BQ5T3F8 832 aa11.38□□□□□ -0.59
NPAS3-205ENST00000547068 RBM26Q5T8P6 1007 aaKnown RBP11.38□□□□□ -0.59
NPAS3-205ENST00000547068 PODNQ7Z5L7 613 aa11.38□□□□□ -0.59
NPAS3-205ENST00000547068 MTDHQ86UE4 582 aaKnown RBP11.38□□□□□ -0.59
NPAS3-205ENST00000547068 COA7Q96BR5 231 aa11.38□□□□□ -0.59
NPAS3-205ENST00000547068 NR1H4Q96RI1 486 aaPredicted RBP11.38□□□□□ -0.59
NPAS3-205ENST00000547068 UIMC1Q96RL1 719 aa11.38□□□□□ -0.59
NPAS3-205ENST00000547068 UBA5Q9GZZ9 404 aa11.38□□□□□ -0.59
NPAS3-205ENST00000547068 LRRC19Q9H756 370 aa11.38□□□□□ -0.59
NPAS3-205ENST00000547068 SYNCQ9H7C4 482 aa11.38□□□□□ -0.59
NPAS3-205ENST00000547068 TYW1Q9NV66 732 aaKnown RBP11.38□□□□□ -0.59
NPAS3-205ENST00000547068 STX18Q9P2W9 335 aaKnown RBP11.38□□□□□ -0.59
NPAS3-205ENST00000547068 LTBP1Q14766 1721 aa11.38□□□□□ -0.59
NPAS3-205ENST00000547068 CLIC2O15247 247 aa11.37□□□□□ -0.59
NPAS3-205ENST00000547068 LYNP07948 512 aa11.37□□□□□ -0.59
NPAS3-205ENST00000547068 DLATP10515 647 aaKnown RBP11.37□□□□□ -0.59
NPAS3-205ENST00000547068 IL1R1P14778 569 aa11.37□□□□□ -0.59
NPAS3-205ENST00000547068 MUTP22033 750 aa11.37□□□□□ -0.59
NPAS3-205ENST00000547068 PRDX5P30044 214 aa11.37□□□□□ -0.59
NPAS3-205ENST00000547068 STAT4Q14765 748 aa11.37□□□□□ -0.59
NPAS3-205ENST00000547068 LLGL1Q15334 1064 aa11.37□□□□□ -0.59
NPAS3-205ENST00000547068 PDK4Q16654 411 aa11.37□□□□□ -0.59
NPAS3-205ENST00000547068 AOC3Q16853 763 aa11.37□□□□□ -0.59
NPAS3-205ENST00000547068 DOK7Q18PE1 504 aa11.37□□□□□ -0.59
NPAS3-205ENST00000547068 CERKLQ49MI3 558 aaPredicted RBP11.37□□□□□ -0.59
NPAS3-205ENST00000547068 RGS9BPQ6ZS82 235 aa11.37□□□□□ -0.59
NPAS3-205ENST00000547068 CLNKQ7Z7G1 428 aa11.37□□□□□ -0.59
NPAS3-205ENST00000547068 LCA5Q86VQ0 697 aa11.37□□□□□ -0.59
NPAS3-205ENST00000547068 SFR1Q86XK3 245 aa11.37□□□□□ -0.59
NPAS3-205ENST00000547068 LARGE2Q8N3Y3 721 aa11.37□□□□□ -0.59
NPAS3-205ENST00000547068 C12orf50Q8NA57 414 aaPredicted RBP11.37□□□□□ -0.59
NPAS3-205ENST00000547068 SLC44A5Q8NCS7 719 aa11.37□□□□□ -0.59
NPAS3-205ENST00000547068 C1orf54Q8WWF1 131 aa11.37□□□□□ -0.59
NPAS3-205ENST00000547068 NCSTNQ92542 709 aa11.37□□□□□ -0.59
NPAS3-205ENST00000547068 MCUR1Q96AQ8 359 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms