RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 RPA1P27694 616 aa15.61■□□□□ 0.09
HOXC11-202ENST00000546378 EIF3BP55884 814 aaKnown RBP15.61■□□□□ 0.09
HOXC11-202ENST00000546378 EDRF1Q3B7T1 1238 aa15.61■□□□□ 0.09
HOXC11-202ENST00000546378 PADI6Q6TGC4 694 aa15.61■□□□□ 0.09
HOXC11-202ENST00000546378 SCARA5Q6ZMJ2 495 aa15.61■□□□□ 0.09
HOXC11-202ENST00000546378 ZC3H18Q86VM9 953 aaKnown RBP15.61■□□□□ 0.09
HOXC11-202ENST00000546378 CALR3Q96L12 384 aaKnown RBP15.61■□□□□ 0.09
HOXC11-202ENST00000546378 MYLK2Q9H1R3 596 aa15.61■□□□□ 0.09
HOXC11-202ENST00000546378 ZDHHC18Q9NUE0 388 aa15.61■□□□□ 0.09
HOXC11-202ENST00000546378 ANKFY1Q9P2R3 1169 aa15.61■□□□□ 0.09
HOXC11-202ENST00000546378 PPFIA2O75334 1257 aa15.61■□□□□ 0.09
HOXC11-202ENST00000546378 TMEM253P0C7T8 217 aa15.61■□□□□ 0.09
HOXC11-202ENST00000546378 ZCCHC18P0CG32 403 aa15.61■□□□□ 0.09
HOXC11-202ENST00000546378 ALAS1P13196 640 aa15.61■□□□□ 0.09
HOXC11-202ENST00000546378 RWDD2BP57060 319 aa15.61■□□□□ 0.09
HOXC11-202ENST00000546378 XKR9Q5GH70 373 aa15.61■□□□□ 0.09
HOXC11-202ENST00000546378 TTC17Q96AE7 1141 aa15.61■□□□□ 0.09
HOXC11-202ENST00000546378 USH1CQ9Y6N9 552 aa15.61■□□□□ 0.09
HOXC11-202ENST00000546378 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.6■□□□□ 0.09
HOXC11-202ENST00000546378 SLITRK3O94933 977 aa15.6■□□□□ 0.09
HOXC11-202ENST00000546378 OSTNP61366 133 aa15.6■□□□□ 0.09
HOXC11-202ENST00000546378 JAG1P78504 1218 aa15.6■□□□□ 0.09
HOXC11-202ENST00000546378 EFTUD2Q15029 972 aaKnown RBP eCLIP15.6■□□□□ 0.09
HOXC11-202ENST00000546378 KCNT1Q5JUK3 1230 aa15.6■□□□□ 0.09
HOXC11-202ENST00000546378 IZUMO3Q5VZ72 239 aa15.6■□□□□ 0.09
HOXC11-202ENST00000546378 TAS1R2Q8TE23 839 aa15.6■□□□□ 0.09
HOXC11-202ENST00000546378 G3BP2Q9UN86 482 aaKnown RBP15.6■□□□□ 0.09
HOXC11-202ENST00000546378 VIL1P09327 827 aaKnown RBP15.6■□□□□ 0.09
HOXC11-202ENST00000546378 UBTFL6P0CB48 400 aaPredicted RBP15.6■□□□□ 0.09
HOXC11-202ENST00000546378 VCAM1P19320 739 aa15.6■□□□□ 0.09
HOXC11-202ENST00000546378 GCLCP48506 637 aaPredicted RBP15.6■□□□□ 0.09
HOXC11-202ENST00000546378 GPATCH4Q5T3I0 446 aaKnown RBP15.6■□□□□ 0.09
HOXC11-202ENST00000546378 MIER3Q7Z3K6 550 aa15.6■□□□□ 0.09
HOXC11-202ENST00000546378 CTAGE3PQ8IX95 158 aa15.6■□□□□ 0.09
HOXC11-202ENST00000546378 IFT74Q96LB3 600 aa15.6■□□□□ 0.09
HOXC11-202ENST00000546378 RBM15Q96T37 977 aaKnown RBP eCLIP15.6■□□□□ 0.09
HOXC11-202ENST00000546378 WDR18Q9BV38 432 aa15.6■□□□□ 0.09
HOXC11-202ENST00000546378 DLGAP2Q9P1A6 1054 aa15.6■□□□□ 0.09
HOXC11-202ENST00000546378 CTDP1Q9Y5B0 961 aaPredicted RBP15.6■□□□□ 0.09
HOXC11-202ENST00000546378 SGK1O00141 431 aa15.6■□□□□ 0.09
HOXC11-202ENST00000546378 CFHP08603 1231 aa15.6■□□□□ 0.09
HOXC11-202ENST00000546378 ACOT2P49753 483 aa15.6■□□□□ 0.09
HOXC11-202ENST00000546378 GMPSP49915 693 aaPredicted RBP15.6■□□□□ 0.09
HOXC11-202ENST00000546378 ATXN3P54252 364 aaPredicted RBP15.6■□□□□ 0.09
HOXC11-202ENST00000546378 XRCC4Q13426 336 aa15.6■□□□□ 0.09
HOXC11-202ENST00000546378 PKN2Q16513 984 aaKnown RBP15.6■□□□□ 0.09
HOXC11-202ENST00000546378 YTHDF3Q7Z739 585 aaKnown RBP15.6■□□□□ 0.09
HOXC11-202ENST00000546378 CDR2LQ86X02 465 aaPredicted RBP15.6■□□□□ 0.09
HOXC11-202ENST00000546378 MICALL2Q8IY33 904 aa15.6■□□□□ 0.09
HOXC11-202ENST00000546378 PPP1R16BQ96T49 567 aa15.6■□□□□ 0.09
HOXC11-202ENST00000546378 FAM213AQ9BRX8 229 aa15.6■□□□□ 0.09
HOXC11-202ENST00000546378 CARD9Q9H257 536 aa15.6■□□□□ 0.09
HOXC11-202ENST00000546378 A0A1W2PPM1 405 aa15.59■□□□□ 0.09
HOXC11-202ENST00000546378 WNT10BO00744 389 aa15.59■□□□□ 0.09
HOXC11-202ENST00000546378 MMP13P45452 471 aa15.59■□□□□ 0.09
HOXC11-202ENST00000546378 PSEN1P49768 467 aa15.59■□□□□ 0.09
HOXC11-202ENST00000546378 GAD2Q05329 585 aa15.59■□□□□ 0.09
HOXC11-202ENST00000546378 GPS1Q13098 491 aa15.59■□□□□ 0.09
HOXC11-202ENST00000546378 TMEM132AQ24JP5 1023 aa15.59■□□□□ 0.09
HOXC11-202ENST00000546378 LRRC8CQ8TDW0 803 aa15.59■□□□□ 0.09
HOXC11-202ENST00000546378 LRRC37BQ96QE4 947 aa15.59■□□□□ 0.09
HOXC11-202ENST00000546378 KIAA1683Q9H0B3 1180 aa15.59■□□□□ 0.09
HOXC11-202ENST00000546378 KDM4CQ9H3R0 1056 aa15.59■□□□□ 0.09
HOXC11-202ENST00000546378 ZWILCHQ9H900 591 aa15.59■□□□□ 0.09
HOXC11-202ENST00000546378 PIDD1Q9HB75 910 aa15.59■□□□□ 0.09
HOXC11-202ENST00000546378 CHRNA3P32297 505 aa15.59■□□□□ 0.09
HOXC11-202ENST00000546378 FOXN2P32314 431 aa15.59■□□□□ 0.09
HOXC11-202ENST00000546378 RASA3Q14644 834 aa15.59■□□□□ 0.09
HOXC11-202ENST00000546378 RRP1BQ14684 758 aaKnown RBP15.59■□□□□ 0.09
HOXC11-202ENST00000546378 BBS9Q3SYG4 887 aa15.59■□□□□ 0.09
HOXC11-202ENST00000546378 SYDE2Q5VT97 1194 aa15.59■□□□□ 0.09
HOXC11-202ENST00000546378 TCHPQ9BT92 498 aa15.59■□□□□ 0.09
HOXC11-202ENST00000546378 WDR11Q9BZH6 1224 aa15.59■□□□□ 0.09
HOXC11-202ENST00000546378 SNED1Q8TER0 1413 aa15.58■□□□□ 0.09
HOXC11-202ENST00000546378 SYNGAP1Q96PV0 1343 aa15.58■□□□□ 0.09
HOXC11-202ENST00000546378 GAS8O95995 478 aa15.58■□□□□ 0.09
HOXC11-202ENST00000546378 AGTP01019 485 aa15.58■□□□□ 0.09
HOXC11-202ENST00000546378 TCF4P15884 667 aa15.58■□□□□ 0.09
HOXC11-202ENST00000546378 BSPRYQ5W0U4 402 aa15.58■□□□□ 0.09
HOXC11-202ENST00000546378 MTDHQ86UE4 582 aaKnown RBP15.58■□□□□ 0.09
HOXC11-202ENST00000546378 ECHDC2Q86YB7 292 aa15.58■□□□□ 0.09
HOXC11-202ENST00000546378 VPS52Q8N1B4 723 aa15.58■□□□□ 0.09
HOXC11-202ENST00000546378 EFCAB3Q8N7B9 438 aa15.58■□□□□ 0.09
HOXC11-202ENST00000546378 MAML1Q92585 1016 aa15.58■□□□□ 0.09
HOXC11-202ENST00000546378 MCUR1Q96AQ8 359 aa15.58■□□□□ 0.09
HOXC11-202ENST00000546378 FHDC1Q9C0D6 1143 aaPredicted RBP15.58■□□□□ 0.09
HOXC11-202ENST00000546378 COL11A2P13942 1736 aaPredicted RBP15.58■□□□□ 0.08
HOXC11-202ENST00000546378 C10orf71Q711Q0 1435 aa15.58■□□□□ 0.08
HOXC11-202ENST00000546378 HNRNPDLO14979 420 aaKnown RBP15.58■□□□□ 0.08
HOXC11-202ENST00000546378 FMNL3Q8IVF7 1028 aa15.58■□□□□ 0.08
HOXC11-202ENST00000546378 SEMA4DQ92854 862 aa15.58■□□□□ 0.08
HOXC11-202ENST00000546378 CCDC17Q96LX7 622 aa15.58■□□□□ 0.08
HOXC11-202ENST00000546378 TTC1Q99614 292 aa15.58■□□□□ 0.08
HOXC11-202ENST00000546378 IDI2Q9BXS1 227 aa15.58■□□□□ 0.08
HOXC11-202ENST00000546378 MYOZ2Q9NPC6 264 aa15.58■□□□□ 0.08
HOXC11-202ENST00000546378 ADAM22Q9P0K1 906 aa15.58■□□□□ 0.08
HOXC11-202ENST00000546378 CNOT7Q9UIV1 285 aaKnown RBP15.58■□□□□ 0.08
HOXC11-202ENST00000546378 CCDC88AQ3V6T2 1871 aa15.58■□□□□ 0.08
HOXC11-202ENST00000546378 SPDYE5A6NIY4 337 aa15.58■□□□□ 0.08
HOXC11-202ENST00000546378 MGRN1O60291 552 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms