RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 TMEM62Q0P6H9 643 aa7□□□□□ -1.29
PRKDC-211ENST00000546304 ADGRE1Q14246 886 aa7□□□□□ -1.29
PRKDC-211ENST00000546304 DHX8Q14562 1220 aaKnown RBP7□□□□□ -1.29
PRKDC-211ENST00000546304 FAM102BQ5T8I3 360 aa7□□□□□ -1.29
PRKDC-211ENST00000546304 RINT1Q6NUQ1 792 aa7□□□□□ -1.29
PRKDC-211ENST00000546304 EFCAB12Q6NXP0 572 aa7□□□□□ -1.29
PRKDC-211ENST00000546304 LRRC8DQ7L1W4 858 aa7□□□□□ -1.29
PRKDC-211ENST00000546304 CEP57L1Q8IYX8 460 aa7□□□□□ -1.29
PRKDC-211ENST00000546304 KIAA0319LQ8IZA0 1049 aa7□□□□□ -1.29
PRKDC-211ENST00000546304 SYT2Q8N9I0 419 aaPredicted RBP7□□□□□ -1.29
PRKDC-211ENST00000546304 ASAP3Q8TDY4 903 aa7□□□□□ -1.29
PRKDC-211ENST00000546304 TCP11Q8WWU5 503 aa7□□□□□ -1.29
PRKDC-211ENST00000546304 DPF3Q92784 378 aa7□□□□□ -1.29
PRKDC-211ENST00000546304 TMEM143Q96AN5 459 aa7□□□□□ -1.29
PRKDC-211ENST00000546304 TRIM43Q96BQ3 446 aaPredicted RBP7□□□□□ -1.29
PRKDC-211ENST00000546304 SPACA7Q96KW9 195 aa7□□□□□ -1.29
PRKDC-211ENST00000546304 DRC1Q96MC2 740 aa7□□□□□ -1.29
PRKDC-211ENST00000546304 NLRP4Q96MN2 994 aa7□□□□□ -1.29
PRKDC-211ENST00000546304 SCLT1Q96NL6 688 aa7□□□□□ -1.29
PRKDC-211ENST00000546304 PPP1R16BQ96T49 567 aa7□□□□□ -1.29
PRKDC-211ENST00000546304 REEP2Q9BRK0 252 aa7□□□□□ -1.29
PRKDC-211ENST00000546304 TIPINQ9BVW5 301 aa7□□□□□ -1.29
PRKDC-211ENST00000546304 WNT8AQ9H1J5 351 aa7□□□□□ -1.29
PRKDC-211ENST00000546304 SRA1Q9HD15 236 aaKnown RBP7□□□□□ -1.29
PRKDC-211ENST00000546304 GPRC5CQ9NQ84 441 aa7□□□□□ -1.29
PRKDC-211ENST00000546304 ZMYND8Q9ULU4 1186 aaPredicted RBP7□□□□□ -1.29
PRKDC-211ENST00000546304 COL4A3BPQ9Y5P4 624 aa7□□□□□ -1.29
PRKDC-211ENST00000546304 TRPV2Q9Y5S1 764 aa7□□□□□ -1.29
PRKDC-211ENST00000546304 CDH23Q9H251 3354 aa6.99□□□□□ -1.29
PRKDC-211ENST00000546304 HIP1RO75146 1068 aa6.99□□□□□ -1.29
PRKDC-211ENST00000546304 GADD45BO75293 160 aaPredicted RBP6.99□□□□□ -1.29
PRKDC-211ENST00000546304 DEAF1O75398 565 aaPredicted RBP6.99□□□□□ -1.29
PRKDC-211ENST00000546304 TIMP1P01033 207 aa6.99□□□□□ -1.29
PRKDC-211ENST00000546304 KRT18P05783 430 aaKnown RBP6.99□□□□□ -1.29
PRKDC-211ENST00000546304 SLFN14P0C7P3 912 aa6.99□□□□□ -1.29
PRKDC-211ENST00000546304 SYN1P17600 705 aa6.99□□□□□ -1.29
PRKDC-211ENST00000546304 ITGB8P26012 769 aa6.99□□□□□ -1.29
PRKDC-211ENST00000546304 CYP2C18P33260 490 aa6.99□□□□□ -1.29
PRKDC-211ENST00000546304 GPC3P51654 580 aa6.99□□□□□ -1.29
PRKDC-211ENST00000546304 MGAT3Q09327 533 aa6.99□□□□□ -1.29
PRKDC-211ENST00000546304 RAD51AP2Q09MP3 1159 aa6.99□□□□□ -1.29
PRKDC-211ENST00000546304 MAPK7Q13164 816 aa6.99□□□□□ -1.29
PRKDC-211ENST00000546304 DMP1Q13316 513 aaPredicted RBP6.99□□□□□ -1.29
PRKDC-211ENST00000546304 CAPSQ13938 189 aa6.99□□□□□ -1.29
PRKDC-211ENST00000546304 MBTPS1Q14703 1052 aa6.99□□□□□ -1.29
PRKDC-211ENST00000546304 KIZQ2M2Z5 673 aa6.99□□□□□ -1.29
PRKDC-211ENST00000546304 ZNF618Q5T7W0 954 aa6.99□□□□□ -1.29
PRKDC-211ENST00000546304 C1orf186Q6ZWK4 172 aa6.99□□□□□ -1.29
PRKDC-211ENST00000546304 SV2BQ7L1I2 683 aa6.99□□□□□ -1.29
PRKDC-211ENST00000546304 MAEAQ7L5Y9 396 aa6.99□□□□□ -1.29
PRKDC-211ENST00000546304 ZNF410Q86VK4 478 aa6.99□□□□□ -1.29
PRKDC-211ENST00000546304 RHPN2Q8IUC4 686 aa6.99□□□□□ -1.29
PRKDC-211ENST00000546304 DAW1Q8N136 415 aa6.99□□□□□ -1.29
PRKDC-211ENST00000546304 CEP120Q8N960 986 aa6.99□□□□□ -1.29
PRKDC-211ENST00000546304 KIFAP3Q92845 792 aa6.99□□□□□ -1.29
PRKDC-211ENST00000546304 OSMRQ99650 979 aa6.99□□□□□ -1.29
PRKDC-211ENST00000546304 PANK2Q9BZ23 570 aa6.99□□□□□ -1.29
PRKDC-211ENST00000546304 TRIM9Q9C026 710 aa6.99□□□□□ -1.29
PRKDC-211ENST00000546304 KBTBD4Q9NVX7 518 aa6.99□□□□□ -1.29
PRKDC-211ENST00000546304 CNTN3Q9P232 1028 aa6.99□□□□□ -1.29
PRKDC-211ENST00000546304 CHD7Q9P2D1 2997 aa6.99□□□□□ -1.29
PRKDC-211ENST00000546304 SUCLA2Q9P2R7 463 aaPredicted RBP6.99□□□□□ -1.29
PRKDC-211ENST00000546304 USP25Q9UHP3 1055 aa6.99□□□□□ -1.29
PRKDC-211ENST00000546304 ODF2LQ9ULJ1 636 aa6.99□□□□□ -1.29
PRKDC-211ENST00000546304 GINS2Q9Y248 185 aa6.99□□□□□ -1.29
PRKDC-211ENST00000546304 NR2E3Q9Y5X4 410 aa6.99□□□□□ -1.29
PRKDC-211ENST00000546304 CDY2AQ9Y6F7 541 aa6.99□□□□□ -1.29
PRKDC-211ENST00000546304 CHD9Q3L8U1 2897 aa6.98□□□□□ -1.29
PRKDC-211ENST00000546304 RALGAPA2Q2PPJ7 1873 aa6.98□□□□□ -1.29
PRKDC-211ENST00000546304 GBF1Q92538 1859 aa6.98□□□□□ -1.29
PRKDC-211ENST00000546304 NPHP3-ACAD11A0A0J9YXS1 232 aa6.98□□□□□ -1.29
PRKDC-211ENST00000546304 MYMKA6NI61 221 aa6.98□□□□□ -1.29
PRKDC-211ENST00000546304 LRRIQ4A6NIV6 560 aa6.98□□□□□ -1.29
PRKDC-211ENST00000546304 RSPH10B2B2RC85 870 aa6.98□□□□□ -1.29
PRKDC-211ENST00000546304 FZD6O60353 706 aa6.98□□□□□ -1.29
PRKDC-211ENST00000546304 KINO60870 393 aaKnown RBP6.98□□□□□ -1.29
PRKDC-211ENST00000546304 GPR32O75388 356 aa6.98□□□□□ -1.29
PRKDC-211ENST00000546304 PRPF40AO75400 957 aaKnown RBP6.98□□□□□ -1.29
PRKDC-211ENST00000546304 PARNO95453 639 aaKnown RBP6.98□□□□□ -1.29
PRKDC-211ENST00000546304 CHRNA1P02708 482 aa6.98□□□□□ -1.29
PRKDC-211ENST00000546304 FURINP09958 794 aa6.98□□□□□ -1.29
PRKDC-211ENST00000546304 IQCF3P0C7M6 154 aa6.98□□□□□ -1.29
PRKDC-211ENST00000546304 RSPH10BP0C881 870 aa6.98□□□□□ -1.29
PRKDC-211ENST00000546304 GHRP10912 638 aa6.98□□□□□ -1.29
PRKDC-211ENST00000546304 LIG1P18858 919 aa6.98□□□□□ -1.29
PRKDC-211ENST00000546304 GLRA2P23416 452 aa6.98□□□□□ -1.29
PRKDC-211ENST00000546304 RFC2P35250 354 aa6.98□□□□□ -1.29
PRKDC-211ENST00000546304 ARL2P36404 184 aa6.98□□□□□ -1.29
PRKDC-211ENST00000546304 NAMPTP43490 491 aa6.98□□□□□ -1.29
PRKDC-211ENST00000546304 ZNF131P52739 623 aa6.98□□□□□ -1.29
PRKDC-211ENST00000546304 CCL23P55773 120 aa6.98□□□□□ -1.29
PRKDC-211ENST00000546304 NLRP11P59045 1033 aaKnown RBP6.98□□□□□ -1.29
PRKDC-211ENST00000546304 ASIC1P78348 528 aa6.98□□□□□ -1.29
PRKDC-211ENST00000546304 LAMTOR4Q0VGL1 99 aa6.98□□□□□ -1.29
PRKDC-211ENST00000546304 TFDP1Q14186 410 aa6.98□□□□□ -1.29
PRKDC-211ENST00000546304 MXD4Q14582 209 aaPredicted RBP6.98□□□□□ -1.29
PRKDC-211ENST00000546304 PPP2R5AQ15172 486 aa6.98□□□□□ -1.29
PRKDC-211ENST00000546304 ARSHQ5FYA8 562 aa6.98□□□□□ -1.29
PRKDC-211ENST00000546304 FBXO47Q5MNV8 452 aa6.98□□□□□ -1.29
PRKDC-211ENST00000546304 CDCA2Q69YH5 1023 aaPredicted RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms