RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 FAM212AQ96EL1 285 aa22.25■■□□□ 1.15
HMGA2-211ENST00000545998 ASB7Q9H672 318 aa22.25■■□□□ 1.15
HMGA2-211ENST00000545998 RBAKQ9NYW8 714 aaPredicted RBP22.25■■□□□ 1.15
HMGA2-211ENST00000545998 FAN1Q9Y2M0 1017 aa22.25■■□□□ 1.15
HMGA2-211ENST00000545998 ATG2AQ2TAZ0 1938 aa22.25■■□□□ 1.15
HMGA2-211ENST00000545998 NR3C1P04150 777 aa22.25■■□□□ 1.15
HMGA2-211ENST00000545998 OR1G1P47890 313 aa22.25■■□□□ 1.15
HMGA2-211ENST00000545998 PLCB3Q01970 1234 aa22.25■■□□□ 1.15
HMGA2-211ENST00000545998 SOX4Q06945 474 aaPredicted RBP22.25■■□□□ 1.15
HMGA2-211ENST00000545998 SPAG1Q07617 926 aa22.25■■□□□ 1.15
HMGA2-211ENST00000545998 MYBPC2Q14324 1141 aa22.25■■□□□ 1.15
HMGA2-211ENST00000545998 ZBTB6Q15916 424 aa22.25■■□□□ 1.15
HMGA2-211ENST00000545998 CENPPQ6IPU0 288 aa22.25■■□□□ 1.15
HMGA2-211ENST00000545998 C18orf25Q96B23 403 aaPredicted RBP22.25■■□□□ 1.15
HMGA2-211ENST00000545998 KIF12Q96FN5 646 aa22.25■■□□□ 1.15
HMGA2-211ENST00000545998 TSPAN18Q96SJ8 248 aa22.25■■□□□ 1.15
HMGA2-211ENST00000545998 PAAF1Q9BRP4 392 aa22.25■■□□□ 1.15
HMGA2-211ENST00000545998 SLC38A7Q9NVC3 462 aa22.25■■□□□ 1.15
HMGA2-211ENST00000545998 CACNG4Q9UBN1 327 aa22.25■■□□□ 1.15
HMGA2-211ENST00000545998 PRUNE2Q8WUY3 3088 aa22.24■■□□□ 1.15
HMGA2-211ENST00000545998 CASTOR2A6NHX0 329 aa22.24■■□□□ 1.15
HMGA2-211ENST00000545998 ZNF233A6NK53 670 aa22.24■■□□□ 1.15
HMGA2-211ENST00000545998 PPP1R3GB7ZBB8 358 aa22.24■■□□□ 1.15
HMGA2-211ENST00000545998 GRM6O15303 877 aa22.24■■□□□ 1.15
HMGA2-211ENST00000545998 IL18RAPO95256 599 aa22.24■■□□□ 1.15
HMGA2-211ENST00000545998 PPP1R2P41236 205 aa22.24■■□□□ 1.15
HMGA2-211ENST00000545998 WNT7BP56706 349 aa22.24■■□□□ 1.15
HMGA2-211ENST00000545998 STIM1Q13586 685 aa22.24■■□□□ 1.15
HMGA2-211ENST00000545998 SNRNP35Q16560 246 aaKnown RBP22.24■■□□□ 1.15
HMGA2-211ENST00000545998 JADE1Q6IE81 842 aa22.24■■□□□ 1.15
HMGA2-211ENST00000545998 RBM43Q6ZSC3 357 aaKnown RBP22.24■■□□□ 1.15
HMGA2-211ENST00000545998 SPPL3Q8TCT6 385 aa22.24■■□□□ 1.15
HMGA2-211ENST00000545998 BCL7CQ8WUZ0 217 aaPredicted RBP22.24■■□□□ 1.15
HMGA2-211ENST00000545998 IGSF21Q96ID5 467 aa22.24■■□□□ 1.15
HMGA2-211ENST00000545998 CDX2Q99626 313 aaPredicted RBP22.24■■□□□ 1.15
HMGA2-211ENST00000545998 GOLGA2P5Q9HBQ8 144 aa22.24■■□□□ 1.15
HMGA2-211ENST00000545998 ALG13Q9NP73 1137 aaKnown RBP22.24■■□□□ 1.15
HMGA2-211ENST00000545998 DERAQ9Y315 318 aa22.24■■□□□ 1.15
HMGA2-211ENST00000545998 PRRC2BQ5JSZ5 2229 aaKnown RBP22.23■■□□□ 1.15
HMGA2-211ENST00000545998 RDH13Q8NBN7 331 aa22.23■■□□□ 1.15
HMGA2-211ENST00000545998 DHTKD1Q96HY7 919 aaPredicted RBP22.23■■□□□ 1.15
HMGA2-211ENST00000545998 MARCH5Q9NX47 278 aa22.23■■□□□ 1.15
HMGA2-211ENST00000545998 PRG3Q9Y2Y8 225 aaPredicted RBP22.23■■□□□ 1.15
HMGA2-211ENST00000545998 C2CD2Q9Y426 696 aa22.23■■□□□ 1.15
HMGA2-211ENST00000545998 F8W810 466 aa22.22■■□□□ 1.15
HMGA2-211ENST00000545998 PSMA7O14818 248 aa22.22■■□□□ 1.15
HMGA2-211ENST00000545998 EXOC3O60645 756 aa22.22■■□□□ 1.15
HMGA2-211ENST00000545998 NFICP08651 508 aa22.22■■□□□ 1.15
HMGA2-211ENST00000545998 DNAJB1P25685 340 aa22.22■■□□□ 1.15
HMGA2-211ENST00000545998 ADGRE1Q14246 886 aa22.22■■□□□ 1.15
HMGA2-211ENST00000545998 HSP90AA2PQ14568 343 aaPredicted RBP22.22■■□□□ 1.15
HMGA2-211ENST00000545998 TMEM132DQ14C87 1099 aa22.22■■□□□ 1.15
HMGA2-211ENST00000545998 EDRF1Q3B7T1 1238 aa22.22■■□□□ 1.15
HMGA2-211ENST00000545998 RABGGTAQ92696 567 aa22.22■■□□□ 1.15
HMGA2-211ENST00000545998 TMEM169Q96HH4 297 aa22.22■■□□□ 1.15
HMGA2-211ENST00000545998 UROC1Q96N76 676 aa22.22■■□□□ 1.15
HMGA2-211ENST00000545998 TUBGCP4Q9UGJ1 667 aa22.22■■□□□ 1.15
HMGA2-211ENST00000545998 UBQLN1Q9UMX0 589 aaKnown RBP22.22■■□□□ 1.15
HMGA2-211ENST00000545998 CYP3A5P20815 502 aa22.21■■□□□ 1.15
HMGA2-211ENST00000545998 PTMSP20962 102 aa22.21■■□□□ 1.15
HMGA2-211ENST00000545998 NR2F2P24468 414 aa22.21■■□□□ 1.15
HMGA2-211ENST00000545998 CLCNKBP51801 687 aa22.21■■□□□ 1.15
HMGA2-211ENST00000545998 PMS1P54277 932 aaKnown RBP22.21■■□□□ 1.15
HMGA2-211ENST00000545998 UBE3AQ05086 875 aa22.21■■□□□ 1.15
HMGA2-211ENST00000545998 UPP1Q16831 310 aa22.21■■□□□ 1.15
HMGA2-211ENST00000545998 CCDC183Q5T5S1 534 aa22.21■■□□□ 1.15
HMGA2-211ENST00000545998 ANKRD40Q6AI12 368 aa22.21■■□□□ 1.15
HMGA2-211ENST00000545998 EFCAB13Q8IY85 973 aa22.21■■□□□ 1.15
HMGA2-211ENST00000545998 POF1BQ8WVV4 589 aa22.21■■□□□ 1.15
HMGA2-211ENST00000545998 COLEC11Q9BWP8 271 aa22.21■■□□□ 1.15
HMGA2-211ENST00000545998 PDE11AQ9HCR9 933 aa22.21■■□□□ 1.15
HMGA2-211ENST00000545998 LZTS1Q9Y250 596 aa22.21■■□□□ 1.15
HMGA2-211ENST00000545998 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.21■■□□□ 1.15
HMGA2-211ENST00000545998 CCNE1P24864 410 aa22.21■■□□□ 1.15
HMGA2-211ENST00000545998 CASP4P49662 377 aa22.21■■□□□ 1.15
HMGA2-211ENST00000545998 KRT17Q04695 432 aa22.21■■□□□ 1.15
HMGA2-211ENST00000545998 CYP24A1Q07973 514 aa22.21■■□□□ 1.15
HMGA2-211ENST00000545998 CAMK1Q14012 370 aa22.21■■□□□ 1.15
HMGA2-211ENST00000545998 SPATA1Q5VX52 437 aa22.21■■□□□ 1.15
HMGA2-211ENST00000545998 NT5DC4Q86YG4 428 aa22.21■■□□□ 1.15
HMGA2-211ENST00000545998 MYLIPQ8WY64 445 aa22.21■■□□□ 1.15
HMGA2-211ENST00000545998 MFSD14AQ96MC6 490 aa22.21■■□□□ 1.15
HMGA2-211ENST00000545998 GAS2L1Q99501 681 aaPredicted RBP22.21■■□□□ 1.15
HMGA2-211ENST00000545998 LMAN2LQ9H0V9 348 aa22.21■■□□□ 1.15
HMGA2-211ENST00000545998 TMEM63CQ9P1W3 806 aa22.21■■□□□ 1.15
HMGA2-211ENST00000545998 TRIM49BA6NDI0 452 aa22.2■■□□□ 1.14
HMGA2-211ENST00000545998 XPOTO43592 962 aaKnown RBP22.2■■□□□ 1.14
HMGA2-211ENST00000545998 EFEMP2O95967 443 aa22.2■■□□□ 1.14
HMGA2-211ENST00000545998 POU3F3P20264 500 aaPredicted RBP22.2■■□□□ 1.14
HMGA2-211ENST00000545998 RPL13P26373 211 aaKnown RBP22.2■■□□□ 1.14
HMGA2-211ENST00000545998 RPL9P32969 192 aaKnown RBP22.2■■□□□ 1.14
HMGA2-211ENST00000545998 LRRC63Q05C16 580 aa22.2■■□□□ 1.14
HMGA2-211ENST00000545998 ADAM9Q13443 819 aa22.2■■□□□ 1.14
HMGA2-211ENST00000545998 KLHL10Q6JEL2 608 aa22.2■■□□□ 1.14
HMGA2-211ENST00000545998 TMEM130Q8N3G9 435 aa22.2■■□□□ 1.14
HMGA2-211ENST00000545998 DDX27Q96GQ7 796 aaKnown RBP22.2■■□□□ 1.14
HMGA2-211ENST00000545998 TSG101Q99816 390 aa22.2■■□□□ 1.14
HMGA2-211ENST00000545998 VN1R3Q9BXE9 311 aa22.2■■□□□ 1.14
HMGA2-211ENST00000545998 LMCD1Q9NZU5 365 aa22.2■■□□□ 1.14
HMGA2-211ENST00000545998 XIRP2A4UGR9 3374 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms