RNA–Protein interactions for RNA: ENST00000545913.5

CIT-217, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 8,520 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-217ENST00000545913 TAGAPQ8N103 731 aa12.32□□□□□ -0.44
CIT-217ENST00000545913 APPL2Q8NEU8 664 aa12.32□□□□□ -0.44
CIT-217ENST00000545913 C1orf54Q8WWF1 131 aa12.32□□□□□ -0.44
CIT-217ENST00000545913 EHD2Q9NZN4 543 aa12.32□□□□□ -0.44
CIT-217ENST00000545913 INPP5AQ14642 412 aa12.32□□□□□ -0.44
CIT-217ENST00000545913 TMEM132DQ14C87 1099 aa12.32□□□□□ -0.44
CIT-217ENST00000545913 RNF149Q8NC42 400 aa12.32□□□□□ -0.44
CIT-217ENST00000545913 NEDD1Q8NHV4 660 aa12.32□□□□□ -0.44
CIT-217ENST00000545913 SELENONQ9NZV5 590 aa12.32□□□□□ -0.44
CIT-217ENST00000545913 GLYCTKQ8IVS8 523 aa12.32□□□□□ -0.44
CIT-217ENST00000545913 CELF1Q92879 486 aaKnown RBP12.32□□□□□ -0.44
CIT-217ENST00000545913 ARHGEF26Q96DR7 871 aa12.32□□□□□ -0.44
CIT-217ENST00000545913 PAWRQ96IZ0 340 aaKnown RBP12.32□□□□□ -0.44
CIT-217ENST00000545913 PLEKHA5Q9HAU0 1116 aa12.32□□□□□ -0.44
CIT-217ENST00000545913 ZC3H4Q9UPT8 1303 aaKnown RBP12.32□□□□□ -0.44
CIT-217ENST00000545913 NCK2O43639 380 aa12.32□□□□□ -0.44
CIT-217ENST00000545913 RBM46Q8TBY0 533 aaKnown RBP12.32□□□□□ -0.44
CIT-217ENST00000545913 PDS5AQ29RF7 1337 aaKnown RBP12.32□□□□□ -0.44
CIT-217ENST00000545913 ITIH6Q6UXX5 1313 aa12.32□□□□□ -0.44
CIT-217ENST00000545913 MYH7P12883 1935 aa12.32□□□□□ -0.44
CIT-217ENST00000545913 C3orf70A6NLC5 250 aaPredicted RBP12.32□□□□□ -0.44
CIT-217ENST00000545913 TCP11X1B4DZS4 312 aa12.32□□□□□ -0.44
CIT-217ENST00000545913 CYBBP04839 570 aa12.32□□□□□ -0.44
CIT-217ENST00000545913 TRIM49P0CI25 452 aa12.32□□□□□ -0.44
CIT-217ENST00000545913 TRIM49CP0CI26 452 aa12.32□□□□□ -0.44
CIT-217ENST00000545913 WASHC5Q12768 1159 aa12.32□□□□□ -0.44
CIT-217ENST00000545913 PID1Q7Z2X4 250 aa12.32□□□□□ -0.44
CIT-217ENST00000545913 OR6J1Q8NGC5 347 aa12.32□□□□□ -0.44
CIT-217ENST00000545913 SEPT8Q92599 483 aa12.32□□□□□ -0.44
CIT-217ENST00000545913 SLC7A5P2Q9GIP4 190 aa12.32□□□□□ -0.44
CIT-217ENST00000545913 PHF2O75151 1096 aa12.32□□□□□ -0.44
CIT-217ENST00000545913 CYP19A1P11511 503 aaPredicted RBP12.32□□□□□ -0.44
CIT-217ENST00000545913 E2F4Q16254 413 aa12.32□□□□□ -0.44
CIT-217ENST00000545913 OTUD5Q96G74 571 aa12.32□□□□□ -0.44
CIT-217ENST00000545913 AFF4Q9UHB7 1163 aaKnown RBP12.32□□□□□ -0.44
CIT-217ENST00000545913 SFMBT1Q9UHJ3 866 aa12.32□□□□□ -0.44
CIT-217ENST00000545913 SNX12Q9UMY4 172 aa12.32□□□□□ -0.44
CIT-217ENST00000545913 MYH8P13535 1937 aa12.32□□□□□ -0.44
CIT-217ENST00000545913 FAM196BA6NMK8 535 aa12.31□□□□□ -0.44
CIT-217ENST00000545913 KCNA2P16389 499 aa12.31□□□□□ -0.44
CIT-217ENST00000545913 SHC4Q6S5L8 630 aa12.31□□□□□ -0.44
CIT-217ENST00000545913 KRT35Q92764 455 aa12.31□□□□□ -0.44
CIT-217ENST00000545913 FBXL5Q9UKA1 691 aa12.31□□□□□ -0.44
CIT-217ENST00000545913 HNRNPRO43390 633 aaKnown RBP12.31□□□□□ -0.44
CIT-217ENST00000545913 SUPT3HO75486 399 aa12.31□□□□□ -0.44
CIT-217ENST00000545913 FGFR4P22455 802 aa12.31□□□□□ -0.44
CIT-217ENST00000545913 HMOX2P30519 316 aa12.31□□□□□ -0.44
CIT-217ENST00000545913 ANKRD40Q6AI12 368 aa12.31□□□□□ -0.44
CIT-217ENST00000545913 ARHGAP18Q8N392 663 aa12.31□□□□□ -0.44
CIT-217ENST00000545913 ATPAF2Q8N5M1 289 aa12.31□□□□□ -0.44
CIT-217ENST00000545913 ARHGEF1Q92888 912 aaKnown RBP12.31□□□□□ -0.44
CIT-217ENST00000545913 TRIM9Q9C026 710 aa12.31□□□□□ -0.44
CIT-217ENST00000545913 MYO1CO00159 1063 aa12.31□□□□□ -0.44
CIT-217ENST00000545913 CDH16O75309 829 aa12.31□□□□□ -0.44
CIT-217ENST00000545913 IL18RAPO95256 599 aa12.31□□□□□ -0.44
CIT-217ENST00000545913 ATICP31939 592 aa12.31□□□□□ -0.44
CIT-217ENST00000545913 STAT5BP51692 787 aa12.31□□□□□ -0.44
CIT-217ENST00000545913 RBP5P82980 135 aa12.31□□□□□ -0.44
CIT-217ENST00000545913 PDAP1Q13442 181 aaKnown RBP12.31□□□□□ -0.44
CIT-217ENST00000545913 C7orf25Q9BPX7 421 aa12.31□□□□□ -0.44
CIT-217ENST00000545913 HSPBP1Q9NZL4 362 aa12.31□□□□□ -0.44
CIT-217ENST00000545913 AMACRQ9UHK6 382 aa12.31□□□□□ -0.44
CIT-217ENST00000545913 AFDNP55196 1824 aaKnown RBP12.31□□□□□ -0.44
CIT-217ENST00000545913 ESYT3A0FGR9 886 aa12.31□□□□□ -0.44
CIT-217ENST00000545913 CFAP69A5D8W1 941 aa12.31□□□□□ -0.44
CIT-217ENST00000545913 KRT87PA6NCN2 255 aa12.31□□□□□ -0.44
CIT-217ENST00000545913 GRIN1Q05586 938 aa12.31□□□□□ -0.44
CIT-217ENST00000545913 LDHDQ86WU2 507 aa12.31□□□□□ -0.44
CIT-217ENST00000545913 PARP9Q8IXQ6 854 aa12.31□□□□□ -0.44
CIT-217ENST00000545913 ZNF555Q8NEP9 628 aa12.31□□□□□ -0.44
CIT-217ENST00000545913 ATXN7L3BQ96GX2 97 aa12.31□□□□□ -0.44
CIT-217ENST00000545913 MRPL1Q9BYD6 325 aaKnown RBP12.31□□□□□ -0.44
CIT-217ENST00000545913 FOXP3Q9BZS1 431 aa12.31□□□□□ -0.44
CIT-217ENST00000545913 PIN4Q9Y237 131 aaKnown RBP12.31□□□□□ -0.44
CIT-217ENST00000545913 ATP1A1P05023 1023 aaKnown RBP12.31□□□□□ -0.44
CIT-217ENST00000545913 KCNJ6P48051 423 aa12.31□□□□□ -0.44
CIT-217ENST00000545913 SULT1E1P49888 294 aa12.31□□□□□ -0.44
CIT-217ENST00000545913 SNRPFP62306 86 aaKnown RBP12.31□□□□□ -0.44
CIT-217ENST00000545913 BYSLQ13895 437 aaKnown RBP12.31□□□□□ -0.44
CIT-217ENST00000545913 PPP4R4Q6NUP7 873 aa12.31□□□□□ -0.44
CIT-217ENST00000545913 PRMT1Q99873 361 aaKnown RBP12.31□□□□□ -0.44
CIT-217ENST00000545913 H0Y626 953 aa12.31□□□□□ -0.44
CIT-217ENST00000545913 TRIM16O95361 564 aa12.31□□□□□ -0.44
CIT-217ENST00000545913 SMARCAD1Q9H4L7 1026 aa12.31□□□□□ -0.44
CIT-217ENST00000545913 NSMCE4AQ9NXX6 385 aa12.31□□□□□ -0.44
CIT-217ENST00000545913 MOCS2O96007 188 aaPredicted RBP12.31□□□□□ -0.44
CIT-217ENST00000545913 PRKCBP05771 671 aa12.31□□□□□ -0.44
CIT-217ENST00000545913 CDH2P19022 906 aaPredicted RBP12.31□□□□□ -0.44
CIT-217ENST00000545913 FMO5P49326 533 aa12.31□□□□□ -0.44
CIT-217ENST00000545913 GYS2P54840 703 aa12.31□□□□□ -0.44
CIT-217ENST00000545913 WDR72Q3MJ13 1102 aa12.31□□□□□ -0.44
CIT-217ENST00000545913 ISCA1Q9BUE6 129 aa12.31□□□□□ -0.44
CIT-217ENST00000545913 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.31□□□□□ -0.44
CIT-217ENST00000545913 IQCA1LA6NCM1 817 aa12.3□□□□□ -0.44
CIT-217ENST00000545913 NCOA4Q13772 614 aa12.3□□□□□ -0.44
CIT-217ENST00000545913 GTF2H3Q13889 308 aa12.3□□□□□ -0.44
CIT-217ENST00000545913 MEI1Q5TIA1 1274 aa12.3□□□□□ -0.44
CIT-217ENST00000545913 SLC35G2Q8TBE7 412 aa12.3□□□□□ -0.44
CIT-217ENST00000545913 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.3□□□□□ -0.44
CIT-217ENST00000545913 XPO7Q9UIA9 1087 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms