RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 TBC1D22BQ9NU19 505 aa16.88■□□□□ 0.29
LDLR-204ENST00000545707 TMEM120BA0PK00 339 aa16.87■□□□□ 0.29
LDLR-204ENST00000545707 TCP11X1B4DZS4 312 aa16.87■□□□□ 0.29
LDLR-204ENST00000545707 LYPLA2O95372 231 aa16.87■□□□□ 0.29
LDLR-204ENST00000545707 GJB6O95452 261 aa16.87■□□□□ 0.29
LDLR-204ENST00000545707 WNT7BP56706 349 aa16.87■□□□□ 0.29
LDLR-204ENST00000545707 CYP24A1Q07973 514 aa16.87■□□□□ 0.29
LDLR-204ENST00000545707 MPP2Q14168 576 aa16.87■□□□□ 0.29
LDLR-204ENST00000545707 SNCBQ16143 134 aa16.87■□□□□ 0.29
LDLR-204ENST00000545707 HIBCHQ6NVY1 386 aaPredicted RBP16.87■□□□□ 0.29
LDLR-204ENST00000545707 TEX2Q8IWB9 1127 aa16.87■□□□□ 0.29
LDLR-204ENST00000545707 MCOLN2Q8IZK6 566 aa16.87■□□□□ 0.29
LDLR-204ENST00000545707 CYP4X1Q8N118 509 aa16.87■□□□□ 0.29
LDLR-204ENST00000545707 ZNF516Q92618 1163 aa16.87■□□□□ 0.29
LDLR-204ENST00000545707 KIFAP3Q92845 792 aa16.87■□□□□ 0.29
LDLR-204ENST00000545707 IWS1Q96ST2 819 aa16.87■□□□□ 0.29
LDLR-204ENST00000545707 FGFR1OP2Q9NVK5 253 aa16.87■□□□□ 0.29
LDLR-204ENST00000545707 HGSO14964 777 aaPredicted RBP16.87■□□□□ 0.29
LDLR-204ENST00000545707 HNRNPDLO14979 420 aaKnown RBP16.87■□□□□ 0.29
LDLR-204ENST00000545707 PMM2O15305 246 aa16.87■□□□□ 0.29
LDLR-204ENST00000545707 XRCC4Q13426 336 aa16.87■□□□□ 0.29
LDLR-204ENST00000545707 E2F5Q15329 346 aa16.87■□□□□ 0.29
LDLR-204ENST00000545707 RHBDF2Q6PJF5 856 aa16.87■□□□□ 0.29
LDLR-204ENST00000545707 CCDC50Q8IVM0 306 aa16.87■□□□□ 0.29
LDLR-204ENST00000545707 CEP170P1Q96L14 293 aa16.87■□□□□ 0.29
LDLR-204ENST00000545707 RUNDC3BQ96NL0 473 aa16.87■□□□□ 0.29
LDLR-204ENST00000545707 EXOC7Q9UPT5 735 aa16.87■□□□□ 0.29
LDLR-204ENST00000545707 COL2A1P02458 1487 aaPredicted RBP16.87■□□□□ 0.29
LDLR-204ENST00000545707 WDR64B1ANS9 1081 aa16.86■□□□□ 0.29
LDLR-204ENST00000545707 ZNF862O60290 1169 aa16.86■□□□□ 0.29
LDLR-204ENST00000545707 CETPP11597 493 aa16.86■□□□□ 0.29
LDLR-204ENST00000545707 ADCY8P40145 1251 aa16.86■□□□□ 0.29
LDLR-204ENST00000545707 VSTM1Q6UX27 236 aa16.86■□□□□ 0.29
LDLR-204ENST00000545707 TRMT10CQ7L0Y3 403 aaKnown RBP16.86■□□□□ 0.29
LDLR-204ENST00000545707 TAOK1Q7L7X3 1001 aa16.86■□□□□ 0.29
LDLR-204ENST00000545707 NIPA1Q7RTP0 329 aa16.86■□□□□ 0.29
LDLR-204ENST00000545707 MCF2L2Q86YR7 1114 aa16.86■□□□□ 0.29
LDLR-204ENST00000545707 BICD1Q96G01 975 aa16.86■□□□□ 0.29
LDLR-204ENST00000545707 WNK4Q96J92 1243 aa16.86■□□□□ 0.29
LDLR-204ENST00000545707 MFSD14AQ96MC6 490 aa16.86■□□□□ 0.29
LDLR-204ENST00000545707 GMLQ99445 158 aa16.86■□□□□ 0.29
LDLR-204ENST00000545707 GABBR1Q9UBS5 961 aa16.86■□□□□ 0.29
LDLR-204ENST00000545707 AGAP1Q9UPQ3 857 aa16.86■□□□□ 0.29
LDLR-204ENST00000545707 ASNSP08243 561 aa16.86■□□□□ 0.29
LDLR-204ENST00000545707 RALAP11233 206 aa16.86■□□□□ 0.29
LDLR-204ENST00000545707 UNGP13051 313 aaPredicted RBP16.86■□□□□ 0.29
LDLR-204ENST00000545707 MFSD5Q6N075 450 aa16.86■□□□□ 0.29
LDLR-204ENST00000545707 TRPM8Q7Z2W7 1104 aa16.86■□□□□ 0.29
LDLR-204ENST00000545707 CCDC91Q7Z6B0 441 aa16.86■□□□□ 0.29
LDLR-204ENST00000545707 ANKS1BQ7Z6G8 1248 aa16.86■□□□□ 0.29
LDLR-204ENST00000545707 TBC1D1Q86TI0 1168 aaPredicted RBP16.86■□□□□ 0.29
LDLR-204ENST00000545707 DHX37Q8IY37 1157 aaKnown RBP16.86■□□□□ 0.29
LDLR-204ENST00000545707 LARGE2Q8N3Y3 721 aa16.86■□□□□ 0.29
LDLR-204ENST00000545707 PDCD2LQ9BRP1 358 aa16.86■□□□□ 0.29
LDLR-204ENST00000545707 DCLK3Q9C098 648 aa16.86■□□□□ 0.29
LDLR-204ENST00000545707 WHRNQ9P202 907 aa16.86■□□□□ 0.29
LDLR-204ENST00000545707 MYPNQ86TC9 1320 aa16.85■□□□□ 0.29
LDLR-204ENST00000545707 GHRP10912 638 aa16.85■□□□□ 0.29
LDLR-204ENST00000545707 RDXP35241 583 aaKnown RBP16.85■□□□□ 0.29
LDLR-204ENST00000545707 SSR1P43307 286 aaKnown RBP16.85■□□□□ 0.29
LDLR-204ENST00000545707 ELF3P78545 371 aaPredicted RBP16.85■□□□□ 0.29
LDLR-204ENST00000545707 ZKSCAN8Q15776 578 aaPredicted RBP16.85■□□□□ 0.29
LDLR-204ENST00000545707 TCP11Q8WWU5 503 aa16.85■□□□□ 0.29
LDLR-204ENST00000545707 SNF8Q96H20 258 aa16.85■□□□□ 0.29
LDLR-204ENST00000545707 C9orf72Q96LT7 481 aa16.85■□□□□ 0.29
LDLR-204ENST00000545707 STMN4Q9H169 189 aaPredicted RBP16.85■□□□□ 0.29
LDLR-204ENST00000545707 KLHL11Q9NVR0 708 aa16.85■□□□□ 0.29
LDLR-204ENST00000545707 ANAPC5Q9UJX4 755 aa16.85■□□□□ 0.29
LDLR-204ENST00000545707 USTQ9Y2C2 406 aa16.85■□□□□ 0.29
LDLR-204ENST00000545707 THAP12O43422 761 aa16.85■□□□□ 0.29
LDLR-204ENST00000545707 SNX3O60493 162 aa16.85■□□□□ 0.29
LDLR-204ENST00000545707 DNAJC8O75937 253 aaPredicted RBP16.85■□□□□ 0.29
LDLR-204ENST00000545707 TTC4O95801 387 aa16.85■□□□□ 0.29
LDLR-204ENST00000545707 ITIH2P19823 946 aa16.85■□□□□ 0.29
LDLR-204ENST00000545707 ARHGEF16Q5VV41 709 aa16.85■□□□□ 0.29
LDLR-204ENST00000545707 NUGGCQ68CJ6 796 aa16.85■□□□□ 0.29
LDLR-204ENST00000545707 SCARA3Q6AZY7 606 aa16.85■□□□□ 0.29
LDLR-204ENST00000545707 DDX27Q96GQ7 796 aaKnown RBP16.85■□□□□ 0.29
LDLR-204ENST00000545707 C11orf70Q9BRQ4 267 aa16.85■□□□□ 0.29
LDLR-204ENST00000545707 ROPN1BQ9BZX4 212 aaPredicted RBP16.85■□□□□ 0.29
LDLR-204ENST00000545707 CCDC134Q9H6E4 229 aa16.85■□□□□ 0.29
LDLR-204ENST00000545707 ROPN1Q9HAT0 212 aaPredicted RBP16.85■□□□□ 0.29
LDLR-204ENST00000545707 RIPK3Q9Y572 518 aa16.85■□□□□ 0.29
LDLR-204ENST00000545707 TAS2R40P59535 323 aa16.84■□□□□ 0.29
LDLR-204ENST00000545707 ITIH4Q14624 930 aa16.84■□□□□ 0.29
LDLR-204ENST00000545707 TAS1R3Q7RTX0 852 aa16.84■□□□□ 0.29
LDLR-204ENST00000545707 TMC2Q8TDI7 906 aa16.84■□□□□ 0.29
LDLR-204ENST00000545707 FBXL18Q96ME1 805 aa16.84■□□□□ 0.29
LDLR-204ENST00000545707 SLC38A10Q9HBR0 1119 aa16.84■□□□□ 0.29
LDLR-204ENST00000545707 PXMP2Q9NR77 195 aa16.84■□□□□ 0.29
LDLR-204ENST00000545707 HOMER3Q9NSC5 361 aa16.84■□□□□ 0.29
LDLR-204ENST00000545707 NINJ2Q9NZG7 142 aa16.84■□□□□ 0.29
LDLR-204ENST00000545707 BAIAP2L1Q9UHR4 511 aa16.84■□□□□ 0.29
LDLR-204ENST00000545707 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.84■□□□□ 0.29
LDLR-204ENST00000545707 UBOX5O94941 541 aa16.84■□□□□ 0.29
LDLR-204ENST00000545707 CLTAP09496 248 aa16.84■□□□□ 0.29
LDLR-204ENST00000545707 ATF2P15336 505 aa16.84■□□□□ 0.29
LDLR-204ENST00000545707 CD58P19256 250 aa16.84■□□□□ 0.29
LDLR-204ENST00000545707 MAP2K2P36507 400 aa16.84■□□□□ 0.29
LDLR-204ENST00000545707 ACOT2P49753 483 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms