RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 PCSK5Q92824 1860 aa6.47□□□□□ -1.37
SNHG1-224ENST00000545688 CCDC78A2IDD5 438 aa6.46□□□□□ -1.38
SNHG1-224ENST00000545688 GPR32O75388 356 aa6.46□□□□□ -1.38
SNHG1-224ENST00000545688 CDKL5O76039 1030 aa6.46□□□□□ -1.38
SNHG1-224ENST00000545688 POMCP01189 267 aa6.46□□□□□ -1.38
SNHG1-224ENST00000545688 SLC6A2P23975 617 aa6.46□□□□□ -1.38
SNHG1-224ENST00000545688 AVPR1BP47901 424 aa6.46□□□□□ -1.38
SNHG1-224ENST00000545688 MXRA7P84157 204 aa6.46□□□□□ -1.38
SNHG1-224ENST00000545688 OCA2Q04671 838 aa6.46□□□□□ -1.38
SNHG1-224ENST00000545688 KLF1Q13351 362 aaPredicted RBP6.46□□□□□ -1.38
SNHG1-224ENST00000545688 OLFML1Q6UWY5 402 aa6.46□□□□□ -1.38
SNHG1-224ENST00000545688 CCHCR1Q8TD31 782 aa6.46□□□□□ -1.38
SNHG1-224ENST00000545688 LINC00476Q8WZB0 136 aa6.46□□□□□ -1.38
SNHG1-224ENST00000545688 ZNF277Q9NRM2 450 aaPredicted RBP6.46□□□□□ -1.38
SNHG1-224ENST00000545688 FBXO34Q9NWN3 711 aa6.46□□□□□ -1.38
SNHG1-224ENST00000545688 ZNHIT2Q9UHR6 403 aa6.46□□□□□ -1.38
SNHG1-224ENST00000545688 RUVBL1Q9Y265 456 aaKnown RBP6.46□□□□□ -1.38
SNHG1-224ENST00000545688 A0A1B0GTW7 788 aa6.45□□□□□ -1.38
SNHG1-224ENST00000545688 FAM171A2A8MVW0 826 aa6.45□□□□□ -1.38
SNHG1-224ENST00000545688 PRSS23O95084 383 aa6.45□□□□□ -1.38
SNHG1-224ENST00000545688 AMY1AP04745 511 aa6.45□□□□□ -1.38
SNHG1-224ENST00000545688 HKR1P10072 659 aa6.45□□□□□ -1.38
SNHG1-224ENST00000545688 EGR2P11161 476 aaPredicted RBP6.45□□□□□ -1.38
SNHG1-224ENST00000545688 TGM1P22735 817 aa6.45□□□□□ -1.38
SNHG1-224ENST00000545688 SCAPQ12770 1279 aa6.45□□□□□ -1.38
SNHG1-224ENST00000545688 UBXN2BQ14CS0 331 aa6.45□□□□□ -1.38
SNHG1-224ENST00000545688 ABHD17BQ5VST6 288 aa6.45□□□□□ -1.38
SNHG1-224ENST00000545688 B3GNTL1Q67FW5 361 aaPredicted RBP6.45□□□□□ -1.38
SNHG1-224ENST00000545688 KRTAP5-3Q6L8H2 238 aa6.45□□□□□ -1.38
SNHG1-224ENST00000545688 SEM1Q6ZVN7 128 aa6.45□□□□□ -1.38
SNHG1-224ENST00000545688 UBE3BQ7Z3V4 1068 aa6.45□□□□□ -1.38
SNHG1-224ENST00000545688 TMEM132CQ8N3T6 1108 aa6.45□□□□□ -1.38
SNHG1-224ENST00000545688 ZGPATQ8N5A5 531 aaKnown RBP6.45□□□□□ -1.38
SNHG1-224ENST00000545688 CAVIN3Q969G5 261 aa6.45□□□□□ -1.38
SNHG1-224ENST00000545688 COQ10AQ96MF6 247 aa6.45□□□□□ -1.38
SNHG1-224ENST00000545688 REXO4Q9GZR2 422 aaKnown RBP6.45□□□□□ -1.38
SNHG1-224ENST00000545688 SYNPO2LQ9H987 977 aa6.45□□□□□ -1.38
SNHG1-224ENST00000545688 RNF181Q9P0P0 153 aa6.45□□□□□ -1.38
SNHG1-224ENST00000545688 MCM8Q9UJA3 840 aa6.45□□□□□ -1.38
SNHG1-224ENST00000545688 TEX33O43247 280 aa6.44□□□□□ -1.38
SNHG1-224ENST00000545688 FOSP01100 380 aaPredicted RBP6.44□□□□□ -1.38
SNHG1-224ENST00000545688 ITGAMP11215 1152 aa6.44□□□□□ -1.38
SNHG1-224ENST00000545688 FGFR4P22455 802 aa6.44□□□□□ -1.38
SNHG1-224ENST00000545688 GCSHP23434 173 aa6.44□□□□□ -1.38
SNHG1-224ENST00000545688 SEC24CP53992 1094 aa6.44□□□□□ -1.38
SNHG1-224ENST00000545688 FOXI1Q12951 378 aa6.44□□□□□ -1.38
SNHG1-224ENST00000545688 MTM1Q13496 603 aa6.44□□□□□ -1.38
SNHG1-224ENST00000545688 ARMC6Q6NXE6 501 aa6.44□□□□□ -1.38
SNHG1-224ENST00000545688 DDX42Q86XP3 938 aaKnown RBP eCLIP6.44□□□□□ -1.387e-6■■■□□ 16.5
SNHG1-224ENST00000545688 CNTD1Q8N815 330 aa6.44□□□□□ -1.38
SNHG1-224ENST00000545688 NRG4Q8WWG1 115 aa6.44□□□□□ -1.38
SNHG1-224ENST00000545688 DPF2Q92785 391 aa6.44□□□□□ -1.38
SNHG1-224ENST00000545688 RNF31Q96EP0 1072 aa6.44□□□□□ -1.38
SNHG1-224ENST00000545688 ALOXE3Q9BYJ1 711 aa6.44□□□□□ -1.38
SNHG1-224ENST00000545688 RNPEPQ9H4A4 650 aa6.44□□□□□ -1.38
SNHG1-224ENST00000545688 RIOX1Q9H6W3 641 aa6.44□□□□□ -1.38
SNHG1-224ENST00000545688 SLC5A4Q9NY91 659 aa6.44□□□□□ -1.38
SNHG1-224ENST00000545688 FAM30AQ9NZY2 134 aa6.44□□□□□ -1.38
SNHG1-224ENST00000545688 NOX1Q9Y5S8 564 aa6.44□□□□□ -1.38
SNHG1-224ENST00000545688 AATKQ6ZMQ8 1374 aa6.44□□□□□ -1.38
SNHG1-224ENST00000545688 TYRP1P17643 537 aa6.43□□□□□ -1.38
SNHG1-224ENST00000545688 SPDYE7PQ495Y7 208 aa6.43□□□□□ -1.38
SNHG1-224ENST00000545688 GPR149Q86SP6 731 aa6.43□□□□□ -1.38
SNHG1-224ENST00000545688 AMOTL1Q8IY63 956 aa6.43□□□□□ -1.38
SNHG1-224ENST00000545688 PPM1NQ8N819 430 aa6.43□□□□□ -1.38
SNHG1-224ENST00000545688 CYFIP2Q96F07 1278 aa6.43□□□□□ -1.38
SNHG1-224ENST00000545688 TMX1Q9H3N1 280 aa6.43□□□□□ -1.38
SNHG1-224ENST00000545688 MANSC1Q9H8J5 431 aa6.43□□□□□ -1.38
SNHG1-224ENST00000545688 USP25Q9UHP3 1055 aa6.43□□□□□ -1.38
SNHG1-224ENST00000545688 TRIM75PA6NK02 468 aa6.42□□□□□ -1.38
SNHG1-224ENST00000545688 ZAR1LA6NP61 321 aa6.42□□□□□ -1.38
SNHG1-224ENST00000545688 KIAA0355O15063 1070 aa6.42□□□□□ -1.38
SNHG1-224ENST00000545688 DDCP20711 480 aa6.42□□□□□ -1.38
SNHG1-224ENST00000545688 PLA2G5P39877 138 aa6.42□□□□□ -1.38
SNHG1-224ENST00000545688 IARSP41252 1262 aaKnown RBP6.42□□□□□ -1.38
SNHG1-224ENST00000545688 CXADRP78310 365 aa6.42□□□□□ -1.38
SNHG1-224ENST00000545688 BLOC1S1P78537 153 aa6.42□□□□□ -1.38
SNHG1-224ENST00000545688 HSD11B2P80365 405 aa6.42□□□□□ -1.38
SNHG1-224ENST00000545688 ATP8B2P98198 1209 aa6.42□□□□□ -1.38
SNHG1-224ENST00000545688 CLUL1Q15846 466 aa6.42□□□□□ -1.38
SNHG1-224ENST00000545688 DPY19L2P1Q6NXN4 242 aa6.42□□□□□ -1.38
SNHG1-224ENST00000545688 CBARPQ8N350 705 aaPredicted RBP6.42□□□□□ -1.38
SNHG1-224ENST00000545688 SLC44A3Q8N4M1 653 aa6.42□□□□□ -1.38
SNHG1-224ENST00000545688 C7orf25Q9BPX7 421 aa6.42□□□□□ -1.38
SNHG1-224ENST00000545688 INTUQ9ULD6 942 aa6.42□□□□□ -1.38
SNHG1-224ENST00000545688 TCRBV7S2A1N4TA0A589 114 aa6.41□□□□□ -1.38
SNHG1-224ENST00000545688 CLK3P49761 638 aaKnown RBP6.41□□□□□ -1.38
SNHG1-224ENST00000545688 INAVAQ3KP66 663 aa6.41□□□□□ -1.38
SNHG1-224ENST00000545688 NECAB2Q7Z6G3 386 aa6.41□□□□□ -1.38
SNHG1-224ENST00000545688 PRIMA1Q86XR5 153 aa6.41□□□□□ -1.38
SNHG1-224ENST00000545688 RHOT1Q8IXI2 618 aa6.41□□□□□ -1.38
SNHG1-224ENST00000545688 RAB24Q969Q5 203 aa6.41□□□□□ -1.38
SNHG1-224ENST00000545688 PUS7LQ9H0K6 701 aaKnown RBP6.41□□□□□ -1.38
SNHG1-224ENST00000545688 TESQ9UGI8 421 aaKnown RBP6.41□□□□□ -1.38
SNHG1-224ENST00000545688 ARHGEF17Q96PE2 2063 aaPredicted RBP6.41□□□□□ -1.38
SNHG1-224ENST00000545688 MYBBP1AQ9BQG0 1328 aaKnown RBP6.41□□□□□ -1.38
SNHG1-224ENST00000545688 GPANK1O95872 356 aa6.4□□□□□ -1.38
SNHG1-224ENST00000545688 ALAS1P13196 640 aa6.4□□□□□ -1.38
SNHG1-224ENST00000545688 FDXRP22570 491 aa6.4□□□□□ -1.38
SNHG1-224ENST00000545688 NOMO3P69849 1222 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms