RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 MRPL9Q9BYD2 267 aaKnown RBP8.53□□□□□ -1.04
SNHG1-223ENST00000545440 XPNPEP1Q9NQW7 623 aa8.53□□□□□ -1.04
SNHG1-223ENST00000545440 RNF19AQ9NV58 838 aa8.53□□□□□ -1.04
SNHG1-223ENST00000545440 PIN4Q9Y237 131 aaKnown RBP8.53□□□□□ -1.04
SNHG1-223ENST00000545440 PCDHB12Q9Y5F1 795 aa8.53□□□□□ -1.04
SNHG1-223ENST00000545440 BDP1A6H8Y1 2624 aa8.52□□□□□ -1.04
SNHG1-223ENST00000545440 VWA8A3KMH1 1905 aa8.52□□□□□ -1.04
SNHG1-223ENST00000545440 LAD1O00515 517 aa8.52□□□□□ -1.05
SNHG1-223ENST00000545440 ZNF623O75123 536 aa8.52□□□□□ -1.05
SNHG1-223ENST00000545440 CSDE1O75534 798 aaKnown RBP8.52□□□□□ -1.05
SNHG1-223ENST00000545440 SPATA31C1P0DKV0 1188 aa8.52□□□□□ -1.05
SNHG1-223ENST00000545440 SNRPBP14678 240 aaKnown RBP8.52□□□□□ -1.05
SNHG1-223ENST00000545440 ATP2B1P20020 1258 aa8.52□□□□□ -1.05
SNHG1-223ENST00000545440 MUTP22033 750 aa8.52□□□□□ -1.05
SNHG1-223ENST00000545440 KCNA5P22460 613 aa8.52□□□□□ -1.05
SNHG1-223ENST00000545440 RPA1P27694 616 aa8.52□□□□□ -1.05
SNHG1-223ENST00000545440 PPM1AP35813 382 aa8.52□□□□□ -1.05
SNHG1-223ENST00000545440 POU5F1BQ06416 359 aa8.52□□□□□ -1.05
SNHG1-223ENST00000545440 CAMK1Q14012 370 aa8.52□□□□□ -1.05
SNHG1-223ENST00000545440 TFDP1Q14186 410 aa8.52□□□□□ -1.05
SNHG1-223ENST00000545440 ZNF174Q15697 407 aa8.52□□□□□ -1.05
SNHG1-223ENST00000545440 LEXMQ3ZCV2 418 aa8.52□□□□□ -1.05
SNHG1-223ENST00000545440 CLLU1OSQ5K130 101 aa8.52□□□□□ -1.05
SNHG1-223ENST00000545440 SPOUT1Q5T280 376 aaKnown RBP8.52□□□□□ -1.05
SNHG1-223ENST00000545440 CATSPER3Q86XQ3 398 aa8.52□□□□□ -1.05
SNHG1-223ENST00000545440 COLGALT1Q8NBJ5 622 aa8.52□□□□□ -1.05
SNHG1-223ENST00000545440 RNF149Q8NC42 400 aa8.52□□□□□ -1.05
SNHG1-223ENST00000545440 SPPL3Q8TCT6 385 aa8.52□□□□□ -1.05
SNHG1-223ENST00000545440 SNX29Q8TEQ0 813 aa8.52□□□□□ -1.05
SNHG1-223ENST00000545440 PRPF31Q8WWY3 499 aaKnown RBP8.52□□□□□ -1.05
SNHG1-223ENST00000545440 GTPBP3Q969Y2 492 aaKnown RBP8.52□□□□□ -1.05
SNHG1-223ENST00000545440 CASD1Q96PB1 797 aa8.52□□□□□ -1.05
SNHG1-223ENST00000545440 POLR3CQ9BUI4 534 aaPredicted RBP8.52□□□□□ -1.05
SNHG1-223ENST00000545440 NFKBIZQ9BYH8 718 aa8.52□□□□□ -1.05
SNHG1-223ENST00000545440 RAB34Q9BZG1 259 aa8.52□□□□□ -1.05
SNHG1-223ENST00000545440 DNAJC25Q9H1X3 360 aa8.52□□□□□ -1.05
SNHG1-223ENST00000545440 CWH43Q9H720 699 aa8.52□□□□□ -1.05
SNHG1-223ENST00000545440 ALG13Q9NP73 1137 aaKnown RBP8.52□□□□□ -1.05
SNHG1-223ENST00000545440 FAM105AQ9NUU6 356 aa8.52□□□□□ -1.05
SNHG1-223ENST00000545440 DBR1Q9UK59 544 aaKnown RBP8.52□□□□□ -1.05
SNHG1-223ENST00000545440 LZTS1Q9Y250 596 aa8.52□□□□□ -1.05
SNHG1-223ENST00000545440 ANK1P16157 1881 aa8.51□□□□□ -1.05
SNHG1-223ENST00000545440 FSD2A1L4K1 749 aa8.51□□□□□ -1.05
SNHG1-223ENST00000545440 CPNE3O75131 537 aaKnown RBP8.51□□□□□ -1.05
SNHG1-223ENST00000545440 PHACTR2O75167 634 aa8.51□□□□□ -1.05
SNHG1-223ENST00000545440 MED24O75448 989 aa8.51□□□□□ -1.05
SNHG1-223ENST00000545440 FGF18O76093 207 aa8.51□□□□□ -1.05
SNHG1-223ENST00000545440 ERLIN2O94905 339 aa8.51□□□□□ -1.05
SNHG1-223ENST00000545440 SRGAP2CP0DJJ0 459 aa8.51□□□□□ -1.05
SNHG1-223ENST00000545440 MAPTP10636 758 aaKnown RBP8.51□□□□□ -1.05
SNHG1-223ENST00000545440 DNAJB1P25685 340 aa8.51□□□□□ -1.05
SNHG1-223ENST00000545440 ARL2P36404 184 aa8.51□□□□□ -1.05
SNHG1-223ENST00000545440 PRPHP41219 470 aa8.51□□□□□ -1.05
SNHG1-223ENST00000545440 TECP42680 631 aa8.51□□□□□ -1.05
SNHG1-223ENST00000545440 TOB1P50616 345 aaPredicted RBP8.51□□□□□ -1.05
SNHG1-223ENST00000545440 PTENP60484 403 aa8.51□□□□□ -1.05
SNHG1-223ENST00000545440 CAPSQ13938 189 aa8.51□□□□□ -1.05
SNHG1-223ENST00000545440 DBN1Q16643 649 aa8.51□□□□□ -1.05
SNHG1-223ENST00000545440 RILPL1Q5EBL4 403 aa8.51□□□□□ -1.05
SNHG1-223ENST00000545440 XKR5Q6UX68 686 aa8.51□□□□□ -1.05
SNHG1-223ENST00000545440 THNSL1Q8IYQ7 743 aa8.51□□□□□ -1.05
SNHG1-223ENST00000545440 RNF169Q8NCN4 708 aa8.51□□□□□ -1.05
SNHG1-223ENST00000545440 MCPH1Q8NEM0 835 aa8.51□□□□□ -1.05
SNHG1-223ENST00000545440 PIGOQ8TEQ8 1089 aa8.51□□□□□ -1.05
SNHG1-223ENST00000545440 POF1BQ8WVV4 589 aa8.51□□□□□ -1.05
SNHG1-223ENST00000545440 CCDC51Q96ER9 411 aa8.51□□□□□ -1.05
SNHG1-223ENST00000545440 ZNF558Q96NG5 402 aa8.51□□□□□ -1.05
SNHG1-223ENST00000545440 NACC1Q96RE7 527 aa8.51□□□□□ -1.05
SNHG1-223ENST00000545440 MINDY3Q9H8M7 445 aa8.51□□□□□ -1.05
SNHG1-223ENST00000545440 TLR9Q9NR96 1032 aa8.51□□□□□ -1.05
SNHG1-223ENST00000545440 TYW1Q9NV66 732 aaKnown RBP8.51□□□□□ -1.05
SNHG1-223ENST00000545440 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.51□□□□□ -1.05
SNHG1-223ENST00000545440 CNTNAP2Q9UHC6 1331 aa8.51□□□□□ -1.05
SNHG1-223ENST00000545440 ZMYM2Q9UBW7 1377 aa8.5□□□□□ -1.05
SNHG1-223ENST00000545440 TSPAN1O60635 241 aa8.5□□□□□ -1.05
SNHG1-223ENST00000545440 USO1O60763 962 aaKnown RBP8.5□□□□□ -1.05
SNHG1-223ENST00000545440 TBX10O75333 385 aa8.5□□□□□ -1.05
SNHG1-223ENST00000545440 GLRA2P23416 452 aa8.5□□□□□ -1.05
SNHG1-223ENST00000545440 GJB2P29033 226 aa8.5□□□□□ -1.05
SNHG1-223ENST00000545440 AXLP30530 894 aa8.5□□□□□ -1.05
SNHG1-223ENST00000545440 HOXA11P31270 313 aaPredicted RBP8.5□□□□□ -1.05
SNHG1-223ENST00000545440 TNP2Q05952 138 aa8.5□□□□□ -1.05
SNHG1-223ENST00000545440 MBTD1Q05BQ5 628 aa8.5□□□□□ -1.05
SNHG1-223ENST00000545440 HYAL1Q12794 435 aa8.5□□□□□ -1.05
SNHG1-223ENST00000545440 PDIA5Q14554 519 aa8.5□□□□□ -1.05
SNHG1-223ENST00000545440 NOTUMQ6P988 496 aa8.5□□□□□ -1.05
SNHG1-223ENST00000545440 KCNT2Q6UVM3 1135 aa8.5□□□□□ -1.05
SNHG1-223ENST00000545440 GLB1LQ6UWU2 654 aa8.5□□□□□ -1.05
SNHG1-223ENST00000545440 LRRC55Q6ZSA7 311 aa8.5□□□□□ -1.05
SNHG1-223ENST00000545440 C4orf32Q8N8J7 132 aa8.5□□□□□ -1.05
SNHG1-223ENST00000545440 IGSF22Q8N9C0 903 aa8.5□□□□□ -1.05
SNHG1-223ENST00000545440 ASAP3Q8TDY4 903 aa8.5□□□□□ -1.05
SNHG1-223ENST00000545440 PGBD4Q96DM1 585 aa8.5□□□□□ -1.05
SNHG1-223ENST00000545440 ZNF837Q96EG3 531 aaPredicted RBP8.5□□□□□ -1.05
SNHG1-223ENST00000545440 POLR3FQ9H1D9 316 aaPredicted RBP8.5□□□□□ -1.05
SNHG1-223ENST00000545440 CLDND1Q9NY35 253 aa8.5□□□□□ -1.05
SNHG1-223ENST00000545440 ABI2Q9NYB9 513 aaPredicted RBP8.5□□□□□ -1.05
SNHG1-223ENST00000545440 FAM50BQ9Y247 325 aa8.5□□□□□ -1.05
SNHG1-223ENST00000545440 USP20Q9Y2K6 914 aa8.5□□□□□ -1.05
SNHG1-223ENST00000545440 PCDHB6Q9Y5E3 794 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms