RNA–Protein interactions for RNA: ENST00000545368.5

CDCA3-210, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 619 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-210ENST00000545368 LUZP1Q86V48 1076 aa14.09□□□□□ -0.15
CDCA3-210ENST00000545368 WDR49Q8IV35 697 aa14.09□□□□□ -0.15
CDCA3-210ENST00000545368 LRRC43Q8N309 656 aa14.09□□□□□ -0.15
CDCA3-210ENST00000545368 CACTINQ8WUQ7 758 aaKnown RBP14.09□□□□□ -0.15
CDCA3-210ENST00000545368 ANKRD36BP1Q96IX9 119 aa14.09□□□□□ -0.15
CDCA3-210ENST00000545368 SAMSN1Q9NSI8 373 aaKnown RBP14.09□□□□□ -0.15
CDCA3-210ENST00000545368 RNF19AQ9NV58 838 aa14.09□□□□□ -0.15
CDCA3-210ENST00000545368 SLC38A7Q9NVC3 462 aa14.09□□□□□ -0.15
CDCA3-210ENST00000545368 FANCLQ9NW38 375 aa14.09□□□□□ -0.15
CDCA3-210ENST00000545368 C2CD2Q9Y426 696 aa14.09□□□□□ -0.15
CDCA3-210ENST00000545368 SMIM28A0A1B0GU29 152 aa14.08□□□□□ -0.16
CDCA3-210ENST00000545368 LRRIQ3A6PVS8 624 aaPredicted RBP14.08□□□□□ -0.16
CDCA3-210ENST00000545368 PTGESO14684 152 aa14.08□□□□□ -0.16
CDCA3-210ENST00000545368 MEFVO15553 781 aaPredicted RBP14.08□□□□□ -0.16
CDCA3-210ENST00000545368 TLL1O43897 1013 aa14.08□□□□□ -0.16
CDCA3-210ENST00000545368 POMCP01189 267 aa14.08□□□□□ -0.16
CDCA3-210ENST00000545368 TNNC2P02585 160 aa14.08□□□□□ -0.16
CDCA3-210ENST00000545368 TPM2P07951 284 aa14.08□□□□□ -0.16
CDCA3-210ENST00000545368 NFICP08651 508 aa14.08□□□□□ -0.16
CDCA3-210ENST00000545368 CDK11BP21127 795 aaKnown RBP14.08□□□□□ -0.16
CDCA3-210ENST00000545368 GATMP50440 423 aa14.08□□□□□ -0.16
CDCA3-210ENST00000545368 TFAMQ00059 246 aaKnown RBP14.08□□□□□ -0.16
CDCA3-210ENST00000545368 PAN2Q504Q3 1202 aaKnown RBP14.08□□□□□ -0.16
CDCA3-210ENST00000545368 HSP90AA4PQ58FG1 418 aa14.08□□□□□ -0.16
CDCA3-210ENST00000545368 CDKAL1Q5VV42 579 aa14.08□□□□□ -0.16
CDCA3-210ENST00000545368 CHRDL2Q6WN34 429 aa14.08□□□□□ -0.16
CDCA3-210ENST00000545368 CMTR2Q8IYT2 770 aaKnown RBP14.08□□□□□ -0.16
CDCA3-210ENST00000545368 TDHQ8IZJ6 230 aa14.08□□□□□ -0.16
CDCA3-210ENST00000545368 BEST2Q8NFU1 509 aa14.08□□□□□ -0.16
CDCA3-210ENST00000545368 PARD3BQ8TEW8 1205 aa14.08□□□□□ -0.16
CDCA3-210ENST00000545368 ZNF689Q96CS4 500 aaPredicted RBP14.08□□□□□ -0.16
CDCA3-210ENST00000545368 CASD1Q96PB1 797 aa14.08□□□□□ -0.16
CDCA3-210ENST00000545368 FAM193BQ96PV7 902 aaPredicted RBP14.08□□□□□ -0.16
CDCA3-210ENST00000545368 UBQLN1Q9UMX0 589 aaKnown RBP14.08□□□□□ -0.16
CDCA3-210ENST00000545368 INSL6Q9Y581 213 aa14.08□□□□□ -0.16
CDCA3-210ENST00000545368 TRIM49P0CI25 452 aa14.07□□□□□ -0.16
CDCA3-210ENST00000545368 TRIM49CP0CI26 452 aa14.07□□□□□ -0.16
CDCA3-210ENST00000545368 AP3M2P53677 418 aa14.07□□□□□ -0.16
CDCA3-210ENST00000545368 WNT7BP56706 349 aa14.07□□□□□ -0.16
CDCA3-210ENST00000545368 BTG3Q14201 252 aaPredicted RBP14.07□□□□□ -0.16
CDCA3-210ENST00000545368 DUOXA2Q1HG44 320 aa14.07□□□□□ -0.16
CDCA3-210ENST00000545368 TCP11X2Q5H9J9 407 aa14.07□□□□□ -0.16
CDCA3-210ENST00000545368 EFCAB13Q8IY85 973 aa14.07□□□□□ -0.16
CDCA3-210ENST00000545368 RNF214Q8ND24 703 aa14.07□□□□□ -0.16
CDCA3-210ENST00000545368 GSTCDQ8NEC7 633 aa14.07□□□□□ -0.16
CDCA3-210ENST00000545368 BORCS6Q96GS4 357 aa14.07□□□□□ -0.16
CDCA3-210ENST00000545368 PPP1R10Q96QC0 940 aaKnown RBP14.07□□□□□ -0.16
CDCA3-210ENST00000545368 RAD9AQ99638 391 aa14.07□□□□□ -0.16
CDCA3-210ENST00000545368 RC3H2Q9HBD1 1191 aaKnown RBP14.07□□□□□ -0.16
CDCA3-210ENST00000545368 TBC1D13Q9NVG8 400 aa14.07□□□□□ -0.16
CDCA3-210ENST00000545368 R3HCC1Q9Y3T6 440 aaKnown RBP14.07□□□□□ -0.16
CDCA3-210ENST00000545368 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.07□□□□□ -0.16
CDCA3-210ENST00000545368 COL4A6Q14031 1691 aa14.07□□□□□ -0.16
CDCA3-210ENST00000545368 PRKCSHP14314 528 aaPredicted RBP14.06□□□□□ -0.16
CDCA3-210ENST00000545368 ZNF18P17022 549 aa14.06□□□□□ -0.16
CDCA3-210ENST00000545368 CYP3A5P20815 502 aa14.06□□□□□ -0.16
CDCA3-210ENST00000545368 GTF2H1P32780 548 aa14.06□□□□□ -0.16
CDCA3-210ENST00000545368 AFF1P51825 1210 aaKnown RBP14.06□□□□□ -0.16
CDCA3-210ENST00000545368 DLG4P78352 724 aa14.06□□□□□ -0.16
CDCA3-210ENST00000545368 CLDN10P78369 228 aa14.06□□□□□ -0.16
CDCA3-210ENST00000545368 HTRA4P83105 476 aaPredicted RBP14.06□□□□□ -0.16
CDCA3-210ENST00000545368 TUSC3Q13454 348 aa14.06□□□□□ -0.16
CDCA3-210ENST00000545368 MAN2A1Q16706 1144 aa14.06□□□□□ -0.16
CDCA3-210ENST00000545368 SPOUT1Q5T280 376 aaKnown RBP14.06□□□□□ -0.16
CDCA3-210ENST00000545368 LMBRD2Q68DH5 695 aaPredicted RBP14.06□□□□□ -0.16
CDCA3-210ENST00000545368 IRF2BP1Q8IU81 584 aa14.06□□□□□ -0.16
CDCA3-210ENST00000545368 TRIM59Q8IWR1 403 aa14.06□□□□□ -0.16
CDCA3-210ENST00000545368 PLEKHO2Q8TD55 490 aa14.06□□□□□ -0.16
CDCA3-210ENST00000545368 UROC1Q96N76 676 aa14.06□□□□□ -0.16
CDCA3-210ENST00000545368 ZMAT2Q96NC0 199 aaKnown RBP14.06□□□□□ -0.16
CDCA3-210ENST00000545368 POP1Q99575 1024 aaKnown RBP14.06□□□□□ -0.16
CDCA3-210ENST00000545368 TUBGCP2Q9BSJ2 902 aa14.06□□□□□ -0.16
CDCA3-210ENST00000545368 MTMR12Q9C0I1 747 aa14.06□□□□□ -0.16
CDCA3-210ENST00000545368 CXCL16Q9H2A7 254 aa14.06□□□□□ -0.16
CDCA3-210ENST00000545368 MMRN2Q9H8L6 949 aa14.06□□□□□ -0.16
CDCA3-210ENST00000545368 INTS13Q9NVM9 706 aa14.06□□□□□ -0.16
CDCA3-210ENST00000545368 MIOSQ9NXC5 875 aa14.06□□□□□ -0.16
CDCA3-210ENST00000545368 PLAGL2Q9UPG8 496 aa14.06□□□□□ -0.16
CDCA3-210ENST00000545368 TNRC18O15417 2968 aaPredicted RBP14.05□□□□□ -0.16
CDCA3-210ENST00000545368 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.05□□□□□ -0.16
CDCA3-210ENST00000545368 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.05□□□□□ -0.16
CDCA3-210ENST00000545368 CARNS1A5YM72 827 aa14.05□□□□□ -0.16
CDCA3-210ENST00000545368 N4BP1O75113 896 aaKnown RBP14.05□□□□□ -0.16
CDCA3-210ENST00000545368 PHACTR2O75167 634 aa14.05□□□□□ -0.16
CDCA3-210ENST00000545368 AFPP02771 609 aaKnown RBP14.05□□□□□ -0.16
CDCA3-210ENST00000545368 MXI1P50539 228 aa14.05□□□□□ -0.16
CDCA3-210ENST00000545368 MAPK8IP2Q13387 824 aaPredicted RBP14.05□□□□□ -0.16
CDCA3-210ENST00000545368 BIRC3Q13489 604 aa14.05□□□□□ -0.16
CDCA3-210ENST00000545368 FIBCD1Q8N539 461 aa14.05□□□□□ -0.16
CDCA3-210ENST00000545368 SLC35C1Q96A29 364 aa14.05□□□□□ -0.16
CDCA3-210ENST00000545368 C18orf25Q96B23 403 aaPredicted RBP14.05□□□□□ -0.16
CDCA3-210ENST00000545368 TMEM8AQ9HCN3 771 aa14.05□□□□□ -0.16
CDCA3-210ENST00000545368 TUBGCP4Q9UGJ1 667 aa14.05□□□□□ -0.16
CDCA3-210ENST00000545368 ITGA11Q9UKX5 1188 aa14.05□□□□□ -0.16
CDCA3-210ENST00000545368 PTPRJQ12913 1337 aa14.05□□□□□ -0.16
CDCA3-210ENST00000545368 GBF1Q92538 1859 aa14.05□□□□□ -0.16
CDCA3-210ENST00000545368 A0A1W2PPC1 479 aa14.04□□□□□ -0.16
CDCA3-210ENST00000545368 PES1O00541 588 aaKnown RBP14.04□□□□□ -0.16
CDCA3-210ENST00000545368 ZC3H11AO75152 810 aaKnown RBP eCLIP14.04□□□□□ -0.16
CDCA3-210ENST00000545368 KRT19P08727 400 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms