RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 TOP2BQ02880 1626 aa5.04□□□□□ -1.6
SNHG1-222ENST00000545308 SHROOM2Q13796 1616 aa5.04□□□□□ -1.6
SNHG1-222ENST00000545308 A0A1W2PR48 441 aa5.03□□□□□ -1.6
SNHG1-222ENST00000545308 F5H423 210 aaPredicted RBP5.03□□□□□ -1.6
SNHG1-222ENST00000545308 MAFGO15525 162 aa5.03□□□□□ -1.6
SNHG1-222ENST00000545308 NRP2O60462 931 aa5.03□□□□□ -1.6
SNHG1-222ENST00000545308 B4GALT4O60513 344 aa5.03□□□□□ -1.6
SNHG1-222ENST00000545308 NBNO60934 754 aa5.03□□□□□ -1.6
SNHG1-222ENST00000545308 HALP42357 657 aa5.03□□□□□ -1.6
SNHG1-222ENST00000545308 SLC6A9P48067 706 aa5.03□□□□□ -1.6
SNHG1-222ENST00000545308 HK3P52790 923 aa5.03□□□□□ -1.6
SNHG1-222ENST00000545308 NKX6-1P78426 367 aaPredicted RBP5.03□□□□□ -1.6
SNHG1-222ENST00000545308 CD69Q07108 199 aa5.03□□□□□ -1.6
SNHG1-222ENST00000545308 NOGQ13253 232 aa5.03□□□□□ -1.6
SNHG1-222ENST00000545308 IFIT5Q13325 482 aaKnown RBP5.03□□□□□ -1.6
SNHG1-222ENST00000545308 RAPGEF1Q13905 1077 aa5.03□□□□□ -1.6
SNHG1-222ENST00000545308 R3HDM1Q15032 1099 aaKnown RBP5.03□□□□□ -1.6
SNHG1-222ENST00000545308 DGKDQ16760 1214 aa5.03□□□□□ -1.6
SNHG1-222ENST00000545308 TUBB8Q3ZCM7 444 aa5.03□□□□□ -1.6
SNHG1-222ENST00000545308 HSP90AB4PQ58FF6 505 aa5.03□□□□□ -1.6
SNHG1-222ENST00000545308 USP51Q70EK9 711 aa5.03□□□□□ -1.6
SNHG1-222ENST00000545308 TTC7BQ86TV6 843 aa5.03□□□□□ -1.6
SNHG1-222ENST00000545308 RHOT1Q8IXI2 618 aa5.03□□□□□ -1.6
SNHG1-222ENST00000545308 DRC7Q8IY82 874 aa5.03□□□□□ -1.6
SNHG1-222ENST00000545308 FAM9AQ8IZU1 332 aaPredicted RBP5.03□□□□□ -1.6
SNHG1-222ENST00000545308 ACRBPQ8NEB7 543 aa5.03□□□□□ -1.6
SNHG1-222ENST00000545308 MYRIPQ8NFW9 859 aa5.03□□□□□ -1.6
SNHG1-222ENST00000545308 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.03□□□□□ -1.6
SNHG1-222ENST00000545308 DEPTORQ8TB45 409 aa5.03□□□□□ -1.6
SNHG1-222ENST00000545308 DYDC2Q96IM9 177 aa5.03□□□□□ -1.6
SNHG1-222ENST00000545308 CDK5RAP3Q96JB5 506 aa5.03□□□□□ -1.6
SNHG1-222ENST00000545308 WWC2-AS2Q96NR7 200 aa5.03□□□□□ -1.6
SNHG1-222ENST00000545308 PTPN18Q99952 460 aa5.03□□□□□ -1.6
SNHG1-222ENST00000545308 C7orf25Q9BPX7 421 aa5.03□□□□□ -1.6
SNHG1-222ENST00000545308 NUP62CLQ9H1M0 184 aa5.03□□□□□ -1.6
SNHG1-222ENST00000545308 ZMAT3Q9HA38 289 aaKnown RBP5.03□□□□□ -1.6
SNHG1-222ENST00000545308 BARX1Q9HBU1 254 aaPredicted RBP5.03□□□□□ -1.6
SNHG1-222ENST00000545308 KCND1Q9NSA2 647 aa5.03□□□□□ -1.6
SNHG1-222ENST00000545308 TRMT13Q9NUP7 481 aaKnown RBP5.03□□□□□ -1.6
SNHG1-222ENST00000545308 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.03□□□□□ -1.6
SNHG1-222ENST00000545308 STAP2Q9UGK3 403 aa5.03□□□□□ -1.6
SNHG1-222ENST00000545308 DNAI1Q9UI46 699 aa5.03□□□□□ -1.6
SNHG1-222ENST00000545308 ZFP69BQ9UJL9 534 aa5.03□□□□□ -1.6
SNHG1-222ENST00000545308 SIK3Q9Y2K2 1263 aa5.03□□□□□ -1.6
SNHG1-222ENST00000545308 FHAD1B1AJZ9 1412 aa5.03□□□□□ -1.6
SNHG1-222ENST00000545308 NUP160Q12769 1436 aa5.03□□□□□ -1.6
SNHG1-222ENST00000545308 ABCA10Q8WWZ4 1543 aa5.02□□□□□ -1.61
SNHG1-222ENST00000545308 LMTK3Q96Q04 1460 aa5.02□□□□□ -1.61
SNHG1-222ENST00000545308 FAM171A2A8MVW0 826 aa5.02□□□□□ -1.61
SNHG1-222ENST00000545308 OVOL3O00110 214 aa5.02□□□□□ -1.61
SNHG1-222ENST00000545308 KPNA5O15131 536 aa5.02□□□□□ -1.61
SNHG1-222ENST00000545308 SLC16A6O15403 523 aa5.02□□□□□ -1.61
SNHG1-222ENST00000545308 MGEA5O60502 916 aa5.02□□□□□ -1.61
SNHG1-222ENST00000545308 LY86O95711 162 aa5.02□□□□□ -1.61
SNHG1-222ENST00000545308 AMHP03971 560 aa5.02□□□□□ -1.61
SNHG1-222ENST00000545308 TYRP1P17643 537 aa5.02□□□□□ -1.61
SNHG1-222ENST00000545308 CTSSP25774 331 aa5.02□□□□□ -1.61
SNHG1-222ENST00000545308 SELENOPP49908 381 aa5.02□□□□□ -1.61
SNHG1-222ENST00000545308 CASP5P51878 434 aa5.02□□□□□ -1.61
SNHG1-222ENST00000545308 NRG3P56975 720 aa5.02□□□□□ -1.61
SNHG1-222ENST00000545308 GPSM2P81274 684 aa5.02□□□□□ -1.61
SNHG1-222ENST00000545308 TARDBPQ13148 414 aaKnown RBP eCLIP5.02□□□□□ -1.61
SNHG1-222ENST00000545308 POLD3Q15054 466 aaPredicted RBP5.02□□□□□ -1.61
SNHG1-222ENST00000545308 TRMT10BQ6PF06 316 aaKnown RBP5.02□□□□□ -1.61
SNHG1-222ENST00000545308 ABHD15Q6UXT9 468 aa5.02□□□□□ -1.61
SNHG1-222ENST00000545308 Q6ZVL8 140 aa5.02□□□□□ -1.61
SNHG1-222ENST00000545308 PALM2Q8IXS6 379 aa5.02□□□□□ -1.61
SNHG1-222ENST00000545308 OR2C3Q8N628 320 aa5.02□□□□□ -1.61
SNHG1-222ENST00000545308 STPG3Q8N7X2 389 aa5.02□□□□□ -1.61
SNHG1-222ENST00000545308 ANKRD42Q8N9B4 389 aa5.02□□□□□ -1.61
SNHG1-222ENST00000545308 PPM1EQ8WY54 764 aa5.02□□□□□ -1.61
SNHG1-222ENST00000545308 PHKBQ93100 1093 aa5.02□□□□□ -1.61
SNHG1-222ENST00000545308 APIPQ96GX9 242 aa5.02□□□□□ -1.61
SNHG1-222ENST00000545308 MEGF9Q9H1U4 602 aa5.02□□□□□ -1.61
SNHG1-222ENST00000545308 CORO2BQ9UQ03 480 aa5.02□□□□□ -1.61
SNHG1-222ENST00000545308 ZDHHC9Q9Y397 364 aa5.02□□□□□ -1.61
SNHG1-222ENST00000545308 TCAF1Q9Y4C2 921 aa5.02□□□□□ -1.61
SNHG1-222ENST00000545308 DIP2BQ9P265 1576 aa5.02□□□□□ -1.61
SNHG1-222ENST00000545308 HECW2Q9P2P5 1572 aa5.02□□□□□ -1.61
SNHG1-222ENST00000545308 ADGRL1O94910 1474 aa5.01□□□□□ -1.61
SNHG1-222ENST00000545308 WRNQ14191 1432 aaPredicted RBP eCLIP5.01□□□□□ -1.61
SNHG1-222ENST00000545308 RHPN2P1A8MT19 583 aa5.01□□□□□ -1.61
SNHG1-222ENST00000545308 TBX3O15119 743 aa5.01□□□□□ -1.61
SNHG1-222ENST00000545308 MUSKO15146 869 aa5.01□□□□□ -1.61
SNHG1-222ENST00000545308 FRS3O43559 492 aa5.01□□□□□ -1.61
SNHG1-222ENST00000545308 NCK2O43639 380 aa5.01□□□□□ -1.61
SNHG1-222ENST00000545308 SGTAO43765 313 aa5.01□□□□□ -1.61
SNHG1-222ENST00000545308 AKR1B10O60218 316 aa5.01□□□□□ -1.61
SNHG1-222ENST00000545308 ZNF623O75123 536 aa5.01□□□□□ -1.61
SNHG1-222ENST00000545308 COL6A1P12109 1028 aa5.01□□□□□ -1.61
SNHG1-222ENST00000545308 HNRNPLP14866 589 aaKnown RBP eCLIP5.01□□□□□ -1.61
SNHG1-222ENST00000545308 TNFSF4P23510 183 aa5.01□□□□□ -1.61
SNHG1-222ENST00000545308 ADSLP30566 484 aaPredicted RBP5.01□□□□□ -1.61
SNHG1-222ENST00000545308 ADCY8P40145 1251 aa5.01□□□□□ -1.61
SNHG1-222ENST00000545308 IL6STP40189 918 aaPredicted RBP5.01□□□□□ -1.61
SNHG1-222ENST00000545308 CDC42EP1Q00587 391 aa5.01□□□□□ -1.61
SNHG1-222ENST00000545308 PLS1Q14651 629 aa5.01□□□□□ -1.61
SNHG1-222ENST00000545308 UBE3CQ15386 1083 aa5.01□□□□□ -1.61
SNHG1-222ENST00000545308 CCDC157Q569K6 752 aa5.01□□□□□ -1.61
SNHG1-222ENST00000545308 THEMIS2Q5TEJ8 643 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms