RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 CLCN4P51793 760 aa12.89□□□□□ -0.35
HDAC4-216ENST00000544989 OSTNP61366 133 aa12.89□□□□□ -0.35
HDAC4-216ENST00000544989 CBX2Q14781 532 aaPredicted RBP12.89□□□□□ -0.35
HDAC4-216ENST00000544989 POSTNQ15063 836 aa12.89□□□□□ -0.35
HDAC4-216ENST00000544989 SYCE2Q6PIF2 218 aa12.89□□□□□ -0.35
HDAC4-216ENST00000544989 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.89□□□□□ -0.35
HDAC4-216ENST00000544989 STXBP4Q6ZWJ1 553 aa12.89□□□□□ -0.35
HDAC4-216ENST00000544989 DYMQ7RTS9 669 aa12.89□□□□□ -0.35
HDAC4-216ENST00000544989 ZNF720Q7Z2F6 126 aa12.89□□□□□ -0.35
HDAC4-216ENST00000544989 CCDC65Q8IXS2 484 aa12.89□□□□□ -0.35
HDAC4-216ENST00000544989 SLC22A17Q8WUG5 538 aa12.89□□□□□ -0.35
HDAC4-216ENST00000544989 FBXL18Q96ME1 805 aa12.89□□□□□ -0.35
HDAC4-216ENST00000544989 GPR62Q9BZJ7 368 aa12.89□□□□□ -0.35
HDAC4-216ENST00000544989 PLEKHA4Q9H4M7 779 aa12.89□□□□□ -0.35
HDAC4-216ENST00000544989 MRPL44Q9H9J2 332 aaKnown RBP12.89□□□□□ -0.35
HDAC4-216ENST00000544989 OLFML3Q9NRN5 406 aa12.89□□□□□ -0.35
HDAC4-216ENST00000544989 NR2E1Q9Y466 385 aa12.89□□□□□ -0.35
HDAC4-216ENST00000544989 MYMKA6NI61 221 aa12.88□□□□□ -0.35
HDAC4-216ENST00000544989 C2CD2LO14523 706 aa12.88□□□□□ -0.35
HDAC4-216ENST00000544989 TEX28O15482 410 aa12.88□□□□□ -0.35
HDAC4-216ENST00000544989 B3GAT3O94766 335 aa12.88□□□□□ -0.35
HDAC4-216ENST00000544989 KIF4AO95239 1232 aa12.88□□□□□ -0.35
HDAC4-216ENST00000544989 HARSP12081 509 aaKnown RBP12.88□□□□□ -0.35
HDAC4-216ENST00000544989 PAX3P23760 479 aa12.88□□□□□ -0.35
HDAC4-216ENST00000544989 PPP2R3AQ06190 1150 aa12.88□□□□□ -0.35
HDAC4-216ENST00000544989 UPP1Q16831 310 aa12.88□□□□□ -0.35
HDAC4-216ENST00000544989 HERC4Q5GLZ8 1057 aaPredicted RBP12.88□□□□□ -0.35
HDAC4-216ENST00000544989 ATAT1Q5SQI0 421 aa12.88□□□□□ -0.35
HDAC4-216ENST00000544989 FOXD4L5Q5VV16 416 aaPredicted RBP12.88□□□□□ -0.35
HDAC4-216ENST00000544989 C15orf39Q6ZRI6 1047 aa12.88□□□□□ -0.35
HDAC4-216ENST00000544989 TAS1R1Q7RTX1 841 aa12.88□□□□□ -0.35
HDAC4-216ENST00000544989 SFR1Q86XK3 245 aa12.88□□□□□ -0.35
HDAC4-216ENST00000544989 CEP120Q8N960 986 aa12.88□□□□□ -0.35
HDAC4-216ENST00000544989 CMASQ8NFW8 434 aaPredicted RBP12.88□□□□□ -0.35
HDAC4-216ENST00000544989 FOXD4L4Q8WXT5 416 aaPredicted RBP12.88□□□□□ -0.35
HDAC4-216ENST00000544989 RIN2Q8WYP3 895 aaPredicted RBP12.88□□□□□ -0.35
HDAC4-216ENST00000544989 PIK3R5Q8WYR1 880 aa12.88□□□□□ -0.35
HDAC4-216ENST00000544989 ZBTB45Q96K62 511 aaPredicted RBP12.88□□□□□ -0.35
HDAC4-216ENST00000544989 FIZ1Q96SL8 496 aa12.88□□□□□ -0.35
HDAC4-216ENST00000544989 MSTO1Q9BUK6 570 aa12.88□□□□□ -0.35
HDAC4-216ENST00000544989 RHOBTB2Q9BYZ6 727 aa12.88□□□□□ -0.35
HDAC4-216ENST00000544989 RPF1Q9H9Y2 349 aaKnown RBP12.88□□□□□ -0.35
HDAC4-216ENST00000544989 MYH15Q9Y2K3 1946 aa12.88□□□□□ -0.35
HDAC4-216ENST00000544989 A0A0B4J269 797 aa12.87□□□□□ -0.35
HDAC4-216ENST00000544989 FRMD3A2A2Y4 597 aa12.87□□□□□ -0.35
HDAC4-216ENST00000544989 PI4K2BG5E9Z4 385 aa12.87□□□□□ -0.35
HDAC4-216ENST00000544989 PODXLO00592 558 aa12.87□□□□□ -0.35
HDAC4-216ENST00000544989 IDEP14735 1019 aa12.87□□□□□ -0.35
HDAC4-216ENST00000544989 EPCAMP16422 314 aa12.87□□□□□ -0.35
HDAC4-216ENST00000544989 CYP3A5P20815 502 aa12.87□□□□□ -0.35
HDAC4-216ENST00000544989 NMT1P30419 496 aaKnown RBP12.87□□□□□ -0.35
HDAC4-216ENST00000544989 CLCNKBP51801 687 aa12.87□□□□□ -0.35
HDAC4-216ENST00000544989 KRT85P78386 507 aa12.87□□□□□ -0.35
HDAC4-216ENST00000544989 RBM10P98175 930 aaKnown RBP12.87□□□□□ -0.35
HDAC4-216ENST00000544989 GLRA4Q5JXX5 417 aa12.87□□□□□ -0.35
HDAC4-216ENST00000544989 AXDND1Q5T1B0 1012 aaPredicted RBP12.87□□□□□ -0.35
HDAC4-216ENST00000544989 FAM171A1Q5VUB5 890 aa12.87□□□□□ -0.35
HDAC4-216ENST00000544989 CNNM4Q6P4Q7 775 aa12.87□□□□□ -0.35
HDAC4-216ENST00000544989 RTL10Q7L3V2 364 aa12.87□□□□□ -0.35
HDAC4-216ENST00000544989 PDILTQ8N807 584 aa12.87□□□□□ -0.35
HDAC4-216ENST00000544989 SPRYD3Q8NCJ5 442 aa12.87□□□□□ -0.35
HDAC4-216ENST00000544989 DNAJC19Q96DA6 116 aa12.87□□□□□ -0.35
HDAC4-216ENST00000544989 ACCSQ96QU6 501 aa12.87□□□□□ -0.35
HDAC4-216ENST00000544989 PANK2Q9BZ23 570 aa12.87□□□□□ -0.35
HDAC4-216ENST00000544989 PANK4Q9NVE7 773 aa12.87□□□□□ -0.35
HDAC4-216ENST00000544989 KBTBD4Q9NVX7 518 aa12.87□□□□□ -0.35
HDAC4-216ENST00000544989 RCOR1Q9UKL0 485 aa12.87□□□□□ -0.35
HDAC4-216ENST00000544989 UBQLN1Q9UMX0 589 aaKnown RBP12.87□□□□□ -0.35
HDAC4-216ENST00000544989 STYXL1Q9Y6J8 313 aa12.87□□□□□ -0.35
HDAC4-216ENST00000544989 CITO14578 2027 aa12.86□□□□□ -0.35
HDAC4-216ENST00000544989 TTC26A0AVF1 554 aa12.86□□□□□ -0.35
HDAC4-216ENST00000544989 LOC730098B7Z3J9 87 aa12.86□□□□□ -0.35
HDAC4-216ENST00000544989 F8W810 466 aa12.86□□□□□ -0.35
HDAC4-216ENST00000544989 SYN3O14994 580 aa12.86□□□□□ -0.35
HDAC4-216ENST00000544989 DCXO43602 365 aa12.86□□□□□ -0.35
HDAC4-216ENST00000544989 E2F4Q16254 413 aa12.86□□□□□ -0.35
HDAC4-216ENST00000544989 PSMD5Q16401 504 aa12.86□□□□□ -0.35
HDAC4-216ENST00000544989 SLC10A6Q3KNW5 377 aa12.86□□□□□ -0.35
HDAC4-216ENST00000544989 RARS2Q5T160 578 aaKnown RBP12.86□□□□□ -0.35
HDAC4-216ENST00000544989 L1TD1Q5T7N2 865 aaKnown RBP12.86□□□□□ -0.35
HDAC4-216ENST00000544989 ANKS3Q6ZW76 656 aa12.86□□□□□ -0.35
HDAC4-216ENST00000544989 KHSRPQ92945 711 aaKnown RBP eCLIP12.86□□□□□ -0.352e-6■■■□□ 15.7
HDAC4-216ENST00000544989 PAAF1Q9BRP4 392 aa12.86□□□□□ -0.35
HDAC4-216ENST00000544989 STRA6Q9BX79 667 aa12.86□□□□□ -0.35
HDAC4-216ENST00000544989 SCAND2PQ9GZW5 306 aaPredicted RBP12.86□□□□□ -0.35
HDAC4-216ENST00000544989 TMEM206Q9H813 350 aa12.86□□□□□ -0.35
HDAC4-216ENST00000544989 ZDHHC7Q9NXF8 308 aa12.86□□□□□ -0.35
HDAC4-216ENST00000544989 PCDHA7Q9UN72 937 aa12.86□□□□□ -0.35
HDAC4-216ENST00000544989 DERAQ9Y315 318 aa12.86□□□□□ -0.35
HDAC4-216ENST00000544989 NUB1Q9Y5A7 615 aa12.86□□□□□ -0.35
HDAC4-216ENST00000544989 SPTBN4Q9H254 2564 aa12.86□□□□□ -0.35
HDAC4-216ENST00000544989 A0A087X0B3 334 aa12.85□□□□□ -0.35
HDAC4-216ENST00000544989 ARHGEF37A1IGU5 675 aa12.85□□□□□ -0.35
HDAC4-216ENST00000544989 H7C4K7 107 aa12.85□□□□□ -0.35
HDAC4-216ENST00000544989 KIAA0391O15091 583 aaKnown RBP12.85□□□□□ -0.35
HDAC4-216ENST00000544989 PPP1R37O75864 691 aa12.85□□□□□ -0.35
HDAC4-216ENST00000544989 GCNT3O95395 438 aa12.85□□□□□ -0.35
HDAC4-216ENST00000544989 LDHAP00338 332 aaKnown RBP12.85□□□□□ -0.35
HDAC4-216ENST00000544989 ADRB2P07550 413 aa12.85□□□□□ -0.35
HDAC4-216ENST00000544989 CXCL8P10145 99 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms