RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 TRAIPQ9BWF2 469 aa6.15□□□□□ -1.43
VPS50-220ENST00000544910 YY1AP1Q9H869 796 aa6.15□□□□□ -1.43
VPS50-220ENST00000544910 C17orf75Q9HAS0 396 aa6.15□□□□□ -1.43
VPS50-220ENST00000544910 NCANO14594 1321 aa6.15□□□□□ -1.43
VPS50-220ENST00000544910 MYH13Q9UKX3 1938 aa6.15□□□□□ -1.43
VPS50-220ENST00000544910 GMNNO75496 209 aa6.15□□□□□ -1.43
VPS50-220ENST00000544910 RPSAP08865 295 aaKnown RBP6.15□□□□□ -1.43
VPS50-220ENST00000544910 COPB2P35606 906 aa6.15□□□□□ -1.43
VPS50-220ENST00000544910 IREB2P48200 963 aaKnown RBP6.15□□□□□ -1.43
VPS50-220ENST00000544910 MICALL2Q8IY33 904 aa6.15□□□□□ -1.43
VPS50-220ENST00000544910 TTC13Q8NBP0 860 aa6.15□□□□□ -1.43
VPS50-220ENST00000544910 ZNF280CQ8ND82 737 aa6.15□□□□□ -1.43
VPS50-220ENST00000544910 FBXO41Q8TF61 875 aa6.15□□□□□ -1.43
VPS50-220ENST00000544910 SLC20A1Q8WUM9 679 aa6.15□□□□□ -1.43
VPS50-220ENST00000544910 RNF25Q96BH1 459 aaPredicted RBP6.15□□□□□ -1.43
VPS50-220ENST00000544910 TUBB6Q9BUF5 446 aa6.15□□□□□ -1.43
VPS50-220ENST00000544910 OSGEPQ9NPF4 335 aa6.15□□□□□ -1.43
VPS50-220ENST00000544910 PXMP2Q9NR77 195 aa6.15□□□□□ -1.43
VPS50-220ENST00000544910 NOP53Q9NZM5 478 aaKnown RBP6.15□□□□□ -1.43
VPS50-220ENST00000544910 GINS2Q9Y248 185 aa6.15□□□□□ -1.43
VPS50-220ENST00000544910 LAMB1P07942 1786 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 C19orf81C9J6K1 198 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 TXNDC9O14530 226 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 NR3C2P08235 984 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 RFC5P40937 340 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 PRKCIP41743 596 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 HMGCS2P54868 508 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 BASP1P80723 227 aaKnown RBP6.14□□□□□ -1.43
VPS50-220ENST00000544910 EN1Q05925 392 aaPredicted RBP6.14□□□□□ -1.43
VPS50-220ENST00000544910 MAPK6Q16659 721 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 ARHGEF19Q8IW93 802 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 C18orf8Q96DM3 657 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 DTNBP1Q96EV8 351 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 CYFIP2Q96F07 1278 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 CFAP36Q96G28 342 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 SENP7Q9BQF6 1050 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 MED10Q9BTT4 135 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 TRIM66O15016 1216 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 PRPSAP2O60256 369 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 PSMD10O75832 226 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 MYCNP04198 464 aaPredicted RBP6.14□□□□□ -1.43
VPS50-220ENST00000544910 FNTAP49354 379 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 ARL4CP56559 192 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 CDR2Q01850 454 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 MYO1EQ12965 1108 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 MAPK7Q13164 816 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 PGM5Q15124 567 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 ZNF568Q3ZCX4 644 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 ZNF667Q5HYK9 610 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 OR6B2Q6IFH4 312 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 C1orf186Q6ZWK4 172 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 C4orf19Q8IY42 314 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 NLRP4Q96MN2 994 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 XPO6Q96QU8 1125 aaKnown RBP6.14□□□□□ -1.43
VPS50-220ENST00000544910 CBWD1Q9BRT8 395 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 KIFC3Q9BVG8 833 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 IFT122Q9HBG6 1241 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 FBXO28Q9NVF7 368 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 IQANK1A0A1B0GTG1 560 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 RASA4BC9J798 803 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 DDX3XO00571 662 aaKnown RBP eCLIP6.14□□□□□ -1.43
VPS50-220ENST00000544910 RASA4O43374 803 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 FAM153BP0C7A2 387 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 SPATA31C1P0DKV0 1188 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 RPS6P62753 249 aaKnown RBP6.14□□□□□ -1.43
VPS50-220ENST00000544910 PDE1CQ14123 709 aaPredicted RBP6.14□□□□□ -1.43
VPS50-220ENST00000544910 FAM153CQ494X1 144 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 NUGGCQ68CJ6 796 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 DNAAF5Q86Y56 855 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 PYROXD1Q8WU10 500 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 RNF34Q969K3 372 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 TMEM143Q96AN5 459 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 BTBD6Q96KE9 485 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 TGS1Q96RS0 853 aaKnown RBP6.14□□□□□ -1.43
VPS50-220ENST00000544910 WDR18Q9BV38 432 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 TMEM117Q9H0C3 514 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 CYP26B1Q9NR63 512 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 ASNSD1Q9NWL6 643 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 FAM153AQ9UHL3 310 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 GTF3C4Q9UKN8 822 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 FRMD3A2A2Y4 597 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 PSTPIP1O43586 416 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 ZWINTO95229 277 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 FAM107AO95990 144 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 HLA-DRAP01903 254 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 EFNA5P52803 228 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 MKRN3Q13064 507 aaKnown RBP6.14□□□□□ -1.43
VPS50-220ENST00000544910 SPARCL1Q14515 664 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 KLHL38Q2WGJ6 581 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 TATDN1Q6P1N9 297 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 NT5DC3Q86UY8 548 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 SLC13A5Q86YT5 568 aaPredicted RBP6.14□□□□□ -1.43
VPS50-220ENST00000544910 RBBP8NLQ8NC74 664 aaPredicted RBP6.14□□□□□ -1.43
VPS50-220ENST00000544910 ATP2A3Q93084 1043 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 SEC16BQ96JE7 1060 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 ROPN1BQ9BZX4 212 aaPredicted RBP6.14□□□□□ -1.43
VPS50-220ENST00000544910 ROPN1Q9HAT0 212 aaPredicted RBP6.14□□□□□ -1.43
VPS50-220ENST00000544910 SEPT10Q9P0V9 454 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 VAV3Q9UKW4 847 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 CPP00450 1065 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms