RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.39■■□□□ 1.66
CHFR-222ENST00000544093 HASPINQ8TF76 798 aa25.39■■□□□ 1.66
CHFR-222ENST00000544093 FOXD4L4Q8WXT5 416 aaPredicted RBP25.39■■□□□ 1.66
CHFR-222ENST00000544093 APOL5Q9BWW9 433 aa25.39■■□□□ 1.66
CHFR-222ENST00000544093 CACNG4Q9UBN1 327 aa25.39■■□□□ 1.66
CHFR-222ENST00000544093 NR2E1Q9Y466 385 aa25.39■■□□□ 1.66
CHFR-222ENST00000544093 MYMKA6NI61 221 aa25.38■■□□□ 1.65
CHFR-222ENST00000544093 NMT1P30419 496 aaKnown RBP25.38■■□□□ 1.65
CHFR-222ENST00000544093 CLCNKBP51801 687 aa25.38■■□□□ 1.65
CHFR-222ENST00000544093 SLFN12LQ6IEE8 588 aa25.38■■□□□ 1.65
CHFR-222ENST00000544093 CYP26C1Q6V0L0 522 aa25.38■■□□□ 1.65
CHFR-222ENST00000544093 ZNF720Q7Z2F6 126 aa25.38■■□□□ 1.65
CHFR-222ENST00000544093 PIK3R5Q8WYR1 880 aa25.38■■□□□ 1.65
CHFR-222ENST00000544093 TNMDQ9H2S6 317 aa25.38■■□□□ 1.65
CHFR-222ENST00000544093 PLEKHA4Q9H4M7 779 aa25.38■■□□□ 1.65
CHFR-222ENST00000544093 OLFML3Q9NRN5 406 aa25.38■■□□□ 1.65
CHFR-222ENST00000544093 A0A0B4J269 797 aa25.37■■□□□ 1.65
CHFR-222ENST00000544093 OGTO15294 1046 aa25.37■■□□□ 1.65
CHFR-222ENST00000544093 DCXO43602 365 aa25.37■■□□□ 1.65
CHFR-222ENST00000544093 SLC10A6Q3KNW5 377 aa25.37■■□□□ 1.65
CHFR-222ENST00000544093 RARS2Q5T160 578 aaKnown RBP25.37■■□□□ 1.65
CHFR-222ENST00000544093 C15orf39Q6ZRI6 1047 aa25.37■■□□□ 1.65
CHFR-222ENST00000544093 SFR1Q86XK3 245 aa25.37■■□□□ 1.65
CHFR-222ENST00000544093 PDILTQ8N807 584 aa25.37■■□□□ 1.65
CHFR-222ENST00000544093 IQUBQ8NA54 791 aa25.37■■□□□ 1.65
CHFR-222ENST00000544093 SPRYD3Q8NCJ5 442 aa25.37■■□□□ 1.65
CHFR-222ENST00000544093 CMASQ8NFW8 434 aaPredicted RBP25.37■■□□□ 1.65
CHFR-222ENST00000544093 DNAJC19Q96DA6 116 aa25.37■■□□□ 1.65
CHFR-222ENST00000544093 B3GALT6Q96L58 329 aa25.37■■□□□ 1.65
CHFR-222ENST00000544093 ZMAT2Q96NC0 199 aaKnown RBP25.37■■□□□ 1.65
CHFR-222ENST00000544093 PANK2Q9BZ23 570 aa25.37■■□□□ 1.65
CHFR-222ENST00000544093 MRPL44Q9H9J2 332 aaKnown RBP25.37■■□□□ 1.65
CHFR-222ENST00000544093 MTCL1Q9Y4B5 1905 aaKnown RBP25.37■■□□□ 1.65
CHFR-222ENST00000544093 PLXNA3P51805 1871 aa25.36■■□□□ 1.65
CHFR-222ENST00000544093 XPOTO43592 962 aaKnown RBP25.36■■□□□ 1.65
CHFR-222ENST00000544093 AMPD3Q01432 767 aa25.36■■□□□ 1.65
CHFR-222ENST00000544093 PPP2R3AQ06190 1150 aa25.36■■□□□ 1.65
CHFR-222ENST00000544093 ALCAMQ13740 583 aa25.36■■□□□ 1.65
CHFR-222ENST00000544093 RTP2Q5QGT7 225 aa25.36■■□□□ 1.65
CHFR-222ENST00000544093 CEP57Q86XR8 500 aa25.36■■□□□ 1.65
CHFR-222ENST00000544093 RPGRIP1Q96KN7 1286 aa25.36■■□□□ 1.65
CHFR-222ENST00000544093 PYM1Q9BRP8 204 aaKnown RBP25.36■■□□□ 1.65
CHFR-222ENST00000544093 MSTO1Q9BUK6 570 aa25.36■■□□□ 1.65
CHFR-222ENST00000544093 RHOBTB2Q9BYZ6 727 aa25.36■■□□□ 1.65
CHFR-222ENST00000544093 EPHX3Q9H6B9 360 aa25.36■■□□□ 1.65
CHFR-222ENST00000544093 MAGEF1Q9HAY2 307 aa25.36■■□□□ 1.65
CHFR-222ENST00000544093 MAN1C1Q9NR34 630 aa25.36■■□□□ 1.65
CHFR-222ENST00000544093 EXOC7Q9UPT5 735 aa25.36■■□□□ 1.65
CHFR-222ENST00000544093 A0A087X0B3 334 aa25.35■■□□□ 1.65
CHFR-222ENST00000544093 FRMD3A2A2Y4 597 aa25.35■■□□□ 1.65
CHFR-222ENST00000544093 PODXLO00592 558 aa25.35■■□□□ 1.65
CHFR-222ENST00000544093 CXCL8P10145 99 aa25.35■■□□□ 1.65
CHFR-222ENST00000544093 IDEP14735 1019 aa25.35■■□□□ 1.65
CHFR-222ENST00000544093 ME1P48163 572 aa25.35■■□□□ 1.65
CHFR-222ENST00000544093 SOX4Q06945 474 aaPredicted RBP25.35■■□□□ 1.65
CHFR-222ENST00000544093 PSMD5Q16401 504 aa25.35■■□□□ 1.65
CHFR-222ENST00000544093 GPR149Q86SP6 731 aa25.35■■□□□ 1.65
CHFR-222ENST00000544093 RNF135Q8IUD6 432 aa25.35■■□□□ 1.65
CHFR-222ENST00000544093 CD302Q8IX05 232 aa25.35■■□□□ 1.65
CHFR-222ENST00000544093 KHSRPQ92945 711 aaKnown RBP eCLIP25.35■■□□□ 1.65
CHFR-222ENST00000544093 HAPLN2Q9GZV7 340 aa25.35■■□□□ 1.65
CHFR-222ENST00000544093 RPF1Q9H9Y2 349 aaKnown RBP25.35■■□□□ 1.65
CHFR-222ENST00000544093 GOLGA2P5Q9HBQ8 144 aa25.35■■□□□ 1.65
CHFR-222ENST00000544093 PCDHB13Q9Y5F0 798 aa25.35■■□□□ 1.65
CHFR-222ENST00000544093 VWA8A3KMH1 1905 aa25.34■■□□□ 1.65
CHFR-222ENST00000544093 TTC26A0AVF1 554 aa25.34■■□□□ 1.65
CHFR-222ENST00000544093 PPP1R37O75864 691 aa25.34■■□□□ 1.65
CHFR-222ENST00000544093 FGFR3P22607 806 aa25.34■■□□□ 1.65
CHFR-222ENST00000544093 POU5F1Q01860 360 aaKnown RBP25.34■■□□□ 1.65
CHFR-222ENST00000544093 PKP1Q13835 747 aa25.34■■□□□ 1.65
CHFR-222ENST00000544093 FOXD4L6Q3SYB3 417 aaPredicted RBP25.34■■□□□ 1.65
CHFR-222ENST00000544093 ZC2HC1CQ53FD0 456 aaPredicted RBP25.34■■□□□ 1.65
CHFR-222ENST00000544093 HERC4Q5GLZ8 1057 aaPredicted RBP25.34■■□□□ 1.65
CHFR-222ENST00000544093 FOXD4L3Q6VB84 417 aaPredicted RBP25.34■■□□□ 1.65
CHFR-222ENST00000544093 CCDC65Q8IXS2 484 aa25.34■■□□□ 1.65
CHFR-222ENST00000544093 C12orf76Q8N812 135 aaPredicted RBP25.34■■□□□ 1.65
CHFR-222ENST00000544093 LNX1Q8TBB1 728 aaPredicted RBP25.34■■□□□ 1.65
CHFR-222ENST00000544093 KBTBD4Q9NVX7 518 aa25.34■■□□□ 1.65
CHFR-222ENST00000544093 FAM13BQ9NYF5 915 aa25.34■■□□□ 1.65
CHFR-222ENST00000544093 STYXL1Q9Y6J8 313 aa25.34■■□□□ 1.65
CHFR-222ENST00000544093 FAM189A1O60320 539 aa25.33■■□□□ 1.65
CHFR-222ENST00000544093 CYP3A5P20815 502 aa25.33■■□□□ 1.65
CHFR-222ENST00000544093 POSTNQ15063 836 aa25.33■■□□□ 1.65
CHFR-222ENST00000544093 E2F4Q16254 413 aa25.33■■□□□ 1.65
CHFR-222ENST00000544093 SEZ6Q53EL9 994 aa25.33■■□□□ 1.65
CHFR-222ENST00000544093 AXDND1Q5T1B0 1012 aaPredicted RBP25.33■■□□□ 1.65
CHFR-222ENST00000544093 SHC4Q6S5L8 630 aa25.33■■□□□ 1.65
CHFR-222ENST00000544093 TMC5Q6UXY8 1006 aa25.33■■□□□ 1.65
CHFR-222ENST00000544093 ANKS3Q6ZW76 656 aa25.33■■□□□ 1.65
CHFR-222ENST00000544093 STXBP4Q6ZWJ1 553 aa25.33■■□□□ 1.65
CHFR-222ENST00000544093 STRA6Q9BX79 667 aa25.33■■□□□ 1.65
CHFR-222ENST00000544093 POMKQ9H5K3 350 aa25.33■■□□□ 1.65
CHFR-222ENST00000544093 PANK4Q9NVE7 773 aa25.33■■□□□ 1.65
CHFR-222ENST00000544093 ZDHHC7Q9NXF8 308 aa25.33■■□□□ 1.65
CHFR-222ENST00000544093 UBQLN1Q9UMX0 589 aaKnown RBP25.33■■□□□ 1.65
CHFR-222ENST00000544093 USTQ9Y2C2 406 aa25.33■■□□□ 1.65
CHFR-222ENST00000544093 NUB1Q9Y5A7 615 aa25.33■■□□□ 1.65
CHFR-222ENST00000544093 ATP6V1DQ9Y5K8 247 aa25.33■■□□□ 1.65
CHFR-222ENST00000544093 MEFVO15553 781 aaPredicted RBP25.32■■□□□ 1.64
CHFR-222ENST00000544093 TGM5O43548 720 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms