RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 GAS2L1Q99501 681 aaPredicted RBP16.41■□□□□ 0.22
CD9-210ENST00000543916 NUP62CLQ9H1M0 184 aa16.41■□□□□ 0.22
CD9-210ENST00000543916 TUBGCP4Q9UGJ1 667 aa16.41■□□□□ 0.22
CD9-210ENST00000543916 FAN1Q9Y2M0 1017 aa16.41■□□□□ 0.22
CD9-210ENST00000543916 REV3LO60673 3130 aa16.41■□□□□ 0.22
CD9-210ENST00000543916 CSPG5O95196 566 aa16.4■□□□□ 0.22
CD9-210ENST00000543916 ALDH2P05091 517 aa16.4■□□□□ 0.22
CD9-210ENST00000543916 NFICP08651 508 aa16.4■□□□□ 0.22
CD9-210ENST00000543916 CD44P16070 742 aaKnown RBP16.4■□□□□ 0.22
CD9-210ENST00000543916 IGFBP4P22692 258 aa16.4■□□□□ 0.22
CD9-210ENST00000543916 POU5F1Q01860 360 aaKnown RBP16.4■□□□□ 0.22
CD9-210ENST00000543916 ZBTB6Q15916 424 aa16.4■□□□□ 0.22
CD9-210ENST00000543916 ZCWPW2Q504Y3 356 aa16.4■□□□□ 0.22
CD9-210ENST00000543916 CBWD2Q8IUF1 395 aa16.4■□□□□ 0.22
CD9-210ENST00000543916 ADSSL1Q8N142 457 aa16.4■□□□□ 0.22
CD9-210ENST00000543916 GOLGA5Q8TBA6 731 aa16.4■□□□□ 0.22
CD9-210ENST00000543916 POF1BQ8WVV4 589 aa16.4■□□□□ 0.22
CD9-210ENST00000543916 KIF12Q96FN5 646 aa16.4■□□□□ 0.22
CD9-210ENST00000543916 FBXL18Q96ME1 805 aa16.4■□□□□ 0.22
CD9-210ENST00000543916 VN1R3Q9BXE9 311 aa16.4■□□□□ 0.22
CD9-210ENST00000543916 DMAC2Q9NW81 257 aa16.4■□□□□ 0.22
CD9-210ENST00000543916 RBAKQ9NYW8 714 aaPredicted RBP16.4■□□□□ 0.22
CD9-210ENST00000543916 TRAF3IP3Q9Y228 551 aa16.4■□□□□ 0.22
CD9-210ENST00000543916 MTCH2Q9Y6C9 303 aa16.4■□□□□ 0.22
CD9-210ENST00000543916 CARNS1A5YM72 827 aa16.39■□□□□ 0.21
CD9-210ENST00000543916 KIF4AO95239 1232 aa16.39■□□□□ 0.21
CD9-210ENST00000543916 NR3C1P04150 777 aa16.39■□□□□ 0.21
CD9-210ENST00000543916 FOSL2P15408 326 aa16.39■□□□□ 0.21
CD9-210ENST00000543916 POU3F3P20264 500 aaPredicted RBP16.39■□□□□ 0.21
CD9-210ENST00000543916 IGFBP6P24592 240 aaPredicted RBP16.39■□□□□ 0.21
CD9-210ENST00000543916 CLCNKBP51801 687 aa16.39■□□□□ 0.21
CD9-210ENST00000543916 HSP90AA2PQ14568 343 aaPredicted RBP16.39■□□□□ 0.21
CD9-210ENST00000543916 SLC9A9Q8IVB4 645 aa16.39■□□□□ 0.21
CD9-210ENST00000543916 CD302Q8IX05 232 aa16.39■□□□□ 0.21
CD9-210ENST00000543916 EFCAB13Q8IY85 973 aa16.39■□□□□ 0.21
CD9-210ENST00000543916 XXYLT1Q8NBI6 393 aa16.39■□□□□ 0.21
CD9-210ENST00000543916 RDH13Q8NBN7 331 aa16.39■□□□□ 0.21
CD9-210ENST00000543916 MRPL38Q96DV4 380 aaKnown RBP16.39■□□□□ 0.21
CD9-210ENST00000543916 TMEM169Q96HH4 297 aa16.39■□□□□ 0.21
CD9-210ENST00000543916 GTPBP4Q9BZE4 634 aaKnown RBP16.39■□□□□ 0.21
CD9-210ENST00000543916 LMAN2LQ9H0V9 348 aa16.39■□□□□ 0.21
CD9-210ENST00000543916 ASB7Q9H672 318 aa16.39■□□□□ 0.21
CD9-210ENST00000543916 SLC38A7Q9NVC3 462 aa16.39■□□□□ 0.21
CD9-210ENST00000543916 LZTS1Q9Y250 596 aa16.39■□□□□ 0.21
CD9-210ENST00000543916 ZNF233A6NK53 670 aa16.38■□□□□ 0.21
CD9-210ENST00000543916 CALUO43852 315 aaPredicted RBP16.38■□□□□ 0.21
CD9-210ENST00000543916 IL18RAPO95256 599 aa16.38■□□□□ 0.21
CD9-210ENST00000543916 EFEMP2O95967 443 aa16.38■□□□□ 0.21
CD9-210ENST00000543916 MBD3O95983 291 aa16.38■□□□□ 0.21
CD9-210ENST00000543916 IRS1P35568 1242 aa16.38■□□□□ 0.21
CD9-210ENST00000543916 GUCY2FP51841 1108 aa16.38■□□□□ 0.21
CD9-210ENST00000543916 KRT17Q04695 432 aa16.38■□□□□ 0.21
CD9-210ENST00000543916 UBE3AQ05086 875 aa16.38■□□□□ 0.21
CD9-210ENST00000543916 TMEM132DQ14C87 1099 aa16.38■□□□□ 0.21
CD9-210ENST00000543916 SNRNP35Q16560 246 aaKnown RBP16.38■□□□□ 0.21
CD9-210ENST00000543916 UPP1Q16831 310 aa16.38■□□□□ 0.21
CD9-210ENST00000543916 HASPINQ8TF76 798 aa16.38■□□□□ 0.21
CD9-210ENST00000543916 TMEM174Q8WUU8 243 aa16.38■□□□□ 0.21
CD9-210ENST00000543916 UROC1Q96N76 676 aa16.38■□□□□ 0.21
CD9-210ENST00000543916 COLEC11Q9BWP8 271 aa16.38■□□□□ 0.21
CD9-210ENST00000543916 KIAA1586Q9HCI6 787 aa16.38■□□□□ 0.21
CD9-210ENST00000543916 PDE11AQ9HCR9 933 aa16.38■□□□□ 0.21
CD9-210ENST00000543916 UBQLN1Q9UMX0 589 aaKnown RBP16.38■□□□□ 0.21
CD9-210ENST00000543916 DERAQ9Y315 318 aa16.38■□□□□ 0.21
CD9-210ENST00000543916 PCDHGC5Q9Y5F6 944 aa16.38■□□□□ 0.21
CD9-210ENST00000543916 PPP1R3GB7ZBB8 358 aa16.37■□□□□ 0.21
CD9-210ENST00000543916 EXOC3O60645 756 aa16.37■□□□□ 0.21
CD9-210ENST00000543916 CASP4P49662 377 aa16.37■□□□□ 0.21
CD9-210ENST00000543916 PMS1P54277 932 aaKnown RBP16.37■□□□□ 0.21
CD9-210ENST00000543916 ERVFC1P60507 584 aa16.37■□□□□ 0.21
CD9-210ENST00000543916 NFIL3Q16649 462 aa16.37■□□□□ 0.21
CD9-210ENST00000543916 PTPROQ16827 1216 aa16.37■□□□□ 0.21
CD9-210ENST00000543916 SPATA1Q5VX52 437 aa16.37■□□□□ 0.21
CD9-210ENST00000543916 CENPPQ6IPU0 288 aa16.37■□□□□ 0.21
CD9-210ENST00000543916 CD300LGQ6UXG3 332 aa16.37■□□□□ 0.21
CD9-210ENST00000543916 DDX53Q86TM3 631 aaKnown RBP16.37■□□□□ 0.21
CD9-210ENST00000543916 TRIML1Q8N9V2 468 aa16.37■□□□□ 0.21
CD9-210ENST00000543916 C3orf58Q8NDZ4 430 aa16.37■□□□□ 0.21
CD9-210ENST00000543916 FAM84AQ96KN4 292 aa16.37■□□□□ 0.21
CD9-210ENST00000543916 TSPAN18Q96SJ8 248 aa16.37■□□□□ 0.21
CD9-210ENST00000543916 TLR9Q9NR96 1032 aa16.37■□□□□ 0.21
CD9-210ENST00000543916 LMCD1Q9NZU5 365 aa16.37■□□□□ 0.21
CD9-210ENST00000543916 ADAM28Q9UKQ2 775 aa16.37■□□□□ 0.21
CD9-210ENST00000543916 C2CD2Q9Y426 696 aa16.37■□□□□ 0.21
CD9-210ENST00000543916 PTPRJQ12913 1337 aa16.37■□□□□ 0.21
CD9-210ENST00000543916 VWA8A3KMH1 1905 aa16.37■□□□□ 0.21
CD9-210ENST00000543916 TRIM49BA6NDI0 452 aa16.36■□□□□ 0.21
CD9-210ENST00000543916 TMEM189-UBE2V1I3L0A0 370 aa16.36■□□□□ 0.21
CD9-210ENST00000543916 TULP1O00294 542 aaPredicted RBP16.36■□□□□ 0.21
CD9-210ENST00000543916 PODXLO00592 558 aa16.36■□□□□ 0.21
CD9-210ENST00000543916 FSCN2O14926 492 aa16.36■□□□□ 0.21
CD9-210ENST00000543916 CYP3A5P20815 502 aa16.36■□□□□ 0.21
CD9-210ENST00000543916 NR2F2P24468 414 aa16.36■□□□□ 0.21
CD9-210ENST00000543916 LRPAP1P30533 357 aa16.36■□□□□ 0.21
CD9-210ENST00000543916 CYP24A1Q07973 514 aa16.36■□□□□ 0.21
CD9-210ENST00000543916 MYBPC2Q14324 1141 aa16.36■□□□□ 0.21
CD9-210ENST00000543916 ANKRD40Q6AI12 368 aa16.36■□□□□ 0.21
CD9-210ENST00000543916 TAS1R1Q7RTX1 841 aa16.36■□□□□ 0.21
CD9-210ENST00000543916 RNF168Q8IYW5 571 aaPredicted RBP16.36■□□□□ 0.21
CD9-210ENST00000543916 MICALL1Q8N3F8 863 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms