RNA–Protein interactions for RNA: ENST00000543854.5

SPPL3-208, Transcript of signal peptide peptidase like 3, humanhuman

TSL 5

Gene SPPL3, Length 508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-208ENST00000543854 RTP2Q5QGT7 225 aa20.85■□□□□ 0.93
SPPL3-208ENST00000543854 DCLRE1AQ6PJP8 1040 aa20.85■□□□□ 0.93
SPPL3-208ENST00000543854 SHC4Q6S5L8 630 aa20.85■□□□□ 0.93
SPPL3-208ENST00000543854 CEP57Q86XR8 500 aa20.85■□□□□ 0.93
SPPL3-208ENST00000543854 DNAJC19Q96DA6 116 aa20.85■□□□□ 0.93
SPPL3-208ENST00000543854 DDX27Q96GQ7 796 aaKnown RBP20.85■□□□□ 0.93
SPPL3-208ENST00000543854 RIPOR3Q96MK2 946 aa20.85■□□□□ 0.93
SPPL3-208ENST00000543854 ZMAT2Q96NC0 199 aaKnown RBP20.85■□□□□ 0.93
SPPL3-208ENST00000543854 NECTIN4Q96NY8 510 aa20.85■□□□□ 0.93
SPPL3-208ENST00000543854 TTPALQ9BTX7 342 aa20.85■□□□□ 0.93
SPPL3-208ENST00000543854 HAPLN2Q9GZV7 340 aa20.85■□□□□ 0.93
SPPL3-208ENST00000543854 CUEDC2Q9H467 287 aa20.85■□□□□ 0.93
SPPL3-208ENST00000543854 MRPL44Q9H9J2 332 aaKnown RBP20.85■□□□□ 0.93
SPPL3-208ENST00000543854 DPP7Q9UHL4 492 aa20.85■□□□□ 0.93
SPPL3-208ENST00000543854 OGTO15294 1046 aa20.84■□□□□ 0.93
SPPL3-208ENST00000543854 IDEP14735 1019 aa20.84■□□□□ 0.93
SPPL3-208ENST00000543854 DNM1Q05193 864 aaKnown RBP20.84■□□□□ 0.93
SPPL3-208ENST00000543854 PPP2R3AQ06190 1150 aa20.84■□□□□ 0.93
SPPL3-208ENST00000543854 SOX4Q06945 474 aaPredicted RBP20.84■□□□□ 0.93
SPPL3-208ENST00000543854 SLC10A6Q3KNW5 377 aa20.84■□□□□ 0.93
SPPL3-208ENST00000543854 PDXDC1Q6P996 788 aa20.84■□□□□ 0.93
SPPL3-208ENST00000543854 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.84■□□□□ 0.93
SPPL3-208ENST00000543854 KHSRPQ92945 711 aaKnown RBP eCLIP20.84■□□□□ 0.938e-7■□□□□ 10.6
SPPL3-208ENST00000543854 C1QTNF1Q9BXJ1 281 aa20.84■□□□□ 0.93
SPPL3-208ENST00000543854 TNMDQ9H2S6 317 aa20.84■□□□□ 0.93
SPPL3-208ENST00000543854 PLEKHA5Q9HAU0 1116 aa20.84■□□□□ 0.93
SPPL3-208ENST00000543854 MAN1C1Q9NR34 630 aa20.84■□□□□ 0.93
SPPL3-208ENST00000543854 FNIP2Q9P278 1114 aa20.84■□□□□ 0.93
SPPL3-208ENST00000543854 VWA8A3KMH1 1905 aa20.83■□□□□ 0.93
SPPL3-208ENST00000543854 PODXLO00592 558 aa20.83■□□□□ 0.93
SPPL3-208ENST00000543854 MEFVO15553 781 aaPredicted RBP20.83■□□□□ 0.93
SPPL3-208ENST00000543854 TRAPPC3O43617 180 aa20.83■□□□□ 0.93
SPPL3-208ENST00000543854 MTHFRP42898 656 aa20.83■□□□□ 0.93
SPPL3-208ENST00000543854 E2F4Q16254 413 aa20.83■□□□□ 0.93
SPPL3-208ENST00000543854 PRSS55Q6UWB4 352 aaPredicted RBP20.83■□□□□ 0.93
SPPL3-208ENST00000543854 ZNF720Q7Z2F6 126 aa20.83■□□□□ 0.93
SPPL3-208ENST00000543854 C12orf76Q8N812 135 aaPredicted RBP20.83■□□□□ 0.93
SPPL3-208ENST00000543854 IQUBQ8NA54 791 aa20.83■□□□□ 0.93
SPPL3-208ENST00000543854 PIK3R5Q8WYR1 880 aa20.83■□□□□ 0.93
SPPL3-208ENST00000543854 DHX58Q96C10 678 aa20.83■□□□□ 0.93
SPPL3-208ENST00000543854 RPGRIP1Q96KN7 1286 aa20.83■□□□□ 0.93
SPPL3-208ENST00000543854 MSTO1Q9BUK6 570 aa20.83■□□□□ 0.93
SPPL3-208ENST00000543854 LRRC27Q9C0I9 530 aa20.83■□□□□ 0.93
SPPL3-208ENST00000543854 OLFML3Q9NRN5 406 aa20.83■□□□□ 0.93
SPPL3-208ENST00000543854 CDH22Q9UJ99 828 aa20.83■□□□□ 0.93
SPPL3-208ENST00000543854 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.83■□□□□ 0.93
SPPL3-208ENST00000543854 A0A0B4J269 797 aa20.82■□□□□ 0.92
SPPL3-208ENST00000543854 FRMD3A2A2Y4 597 aa20.82■□□□□ 0.92
SPPL3-208ENST00000543854 LOC730098B7Z3J9 87 aa20.82■□□□□ 0.92
SPPL3-208ENST00000543854 PPP1R37O75864 691 aa20.82■□□□□ 0.92
SPPL3-208ENST00000543854 GCNT3O95395 438 aa20.82■□□□□ 0.92
SPPL3-208ENST00000543854 TNFSF9P41273 254 aa20.82■□□□□ 0.92
SPPL3-208ENST00000543854 ALCAMQ13740 583 aa20.82■□□□□ 0.92
SPPL3-208ENST00000543854 PSMD5Q16401 504 aa20.82■□□□□ 0.92
SPPL3-208ENST00000543854 HERC4Q5GLZ8 1057 aaPredicted RBP20.82■□□□□ 0.92
SPPL3-208ENST00000543854 AXDND1Q5T1B0 1012 aaPredicted RBP20.82■□□□□ 0.92
SPPL3-208ENST00000543854 SLFN12LQ6IEE8 588 aa20.82■□□□□ 0.92
SPPL3-208ENST00000543854 SLC39A4Q6P5W5 647 aa20.82■□□□□ 0.92
SPPL3-208ENST00000543854 TMC5Q6UXY8 1006 aa20.82■□□□□ 0.92
SPPL3-208ENST00000543854 GLYCTKQ8IVS8 523 aa20.82■□□□□ 0.92
SPPL3-208ENST00000543854 CCDC65Q8IXS2 484 aa20.82■□□□□ 0.92
SPPL3-208ENST00000543854 C3orf58Q8NDZ4 430 aa20.82■□□□□ 0.92
SPPL3-208ENST00000543854 C18orf25Q96B23 403 aaPredicted RBP20.82■□□□□ 0.92
SPPL3-208ENST00000543854 RPF1Q9H9Y2 349 aaKnown RBP20.82■□□□□ 0.92
SPPL3-208ENST00000543854 PANK4Q9NVE7 773 aa20.82■□□□□ 0.92
SPPL3-208ENST00000543854 FAM13BQ9NYF5 915 aa20.82■□□□□ 0.92
SPPL3-208ENST00000543854 TBC1D7Q9P0N9 293 aa20.82■□□□□ 0.92
SPPL3-208ENST00000543854 EXOC7Q9UPT5 735 aa20.82■□□□□ 0.92
SPPL3-208ENST00000543854 TTC26A0AVF1 554 aa20.81■□□□□ 0.92
SPPL3-208ENST00000543854 PI4K2BG5E9Z4 385 aa20.81■□□□□ 0.92
SPPL3-208ENST00000543854 DCXO43602 365 aa20.81■□□□□ 0.92
SPPL3-208ENST00000543854 FAM189A1O60320 539 aa20.81■□□□□ 0.92
SPPL3-208ENST00000543854 C1RP00736 705 aa20.81■□□□□ 0.92
SPPL3-208ENST00000543854 ALADP13716 330 aa20.81■□□□□ 0.92
SPPL3-208ENST00000543854 RPL17P18621 184 aaKnown RBP20.81■□□□□ 0.92
SPPL3-208ENST00000543854 RPL9P32969 192 aaKnown RBP20.81■□□□□ 0.92
SPPL3-208ENST00000543854 AMPD3Q01432 767 aa20.81■□□□□ 0.92
SPPL3-208ENST00000543854 BECN1Q14457 450 aa20.81■□□□□ 0.92
SPPL3-208ENST00000543854 ENOX2Q16206 610 aaKnown RBP20.81■□□□□ 0.92
SPPL3-208ENST00000543854 ATAT1Q5SQI0 421 aa20.81■□□□□ 0.92
SPPL3-208ENST00000543854 ZBTB41Q5SVQ8 909 aa20.81■□□□□ 0.92
SPPL3-208ENST00000543854 POMKQ9H5K3 350 aa20.81■□□□□ 0.92
SPPL3-208ENST00000543854 EPHX3Q9H6B9 360 aa20.81■□□□□ 0.92
SPPL3-208ENST00000543854 MAGEF1Q9HAY2 307 aa20.81■□□□□ 0.92
SPPL3-208ENST00000543854 KBTBD4Q9NVX7 518 aa20.81■□□□□ 0.92
SPPL3-208ENST00000543854 TUBGCP4Q9UGJ1 667 aa20.81■□□□□ 0.92
SPPL3-208ENST00000543854 PCDHA7Q9UN72 937 aa20.81■□□□□ 0.92
SPPL3-208ENST00000543854 NR2E1Q9Y466 385 aa20.81■□□□□ 0.92
SPPL3-208ENST00000543854 NUB1Q9Y5A7 615 aa20.81■□□□□ 0.92
SPPL3-208ENST00000543854 DENND4AQ7Z401 1863 aa20.8■□□□□ 0.92
SPPL3-208ENST00000543854 TGM5O43548 720 aa20.8■□□□□ 0.92
SPPL3-208ENST00000543854 WEE2P0C1S8 567 aa20.8■□□□□ 0.92
SPPL3-208ENST00000543854 FGFR3P22607 806 aa20.8■□□□□ 0.92
SPPL3-208ENST00000543854 L1TD1Q5T7N2 865 aaKnown RBP20.8■□□□□ 0.92
SPPL3-208ENST00000543854 ADALQ6DHV7 355 aa20.8■□□□□ 0.92
SPPL3-208ENST00000543854 KANK3Q6NY19 840 aa20.8■□□□□ 0.92
SPPL3-208ENST00000543854 C15orf39Q6ZRI6 1047 aa20.8■□□□□ 0.92
SPPL3-208ENST00000543854 PALB2Q86YC2 1186 aa20.8■□□□□ 0.92
SPPL3-208ENST00000543854 RNF135Q8IUD6 432 aa20.8■□□□□ 0.92
SPPL3-208ENST00000543854 LNX1Q8TBB1 728 aaPredicted RBP20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms