RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 TKTP29401 623 aaKnown RBP24.86■■□□□ 1.57
CDKN3-207ENST00000543789 CCT6AP40227 531 aaKnown RBP24.86■■□□□ 1.57
CDKN3-207ENST00000543789 ST3GAL1Q11201 340 aa24.86■■□□□ 1.57
CDKN3-207ENST00000543789 ECM1Q16610 540 aa24.86■■□□□ 1.57
CDKN3-207ENST00000543789 KIAA2013Q8IYS2 634 aa24.86■■□□□ 1.57
CDKN3-207ENST00000543789 MAML2Q8IZL2 1156 aaPredicted RBP24.86■■□□□ 1.57
CDKN3-207ENST00000543789 C8orf76Q96K31 380 aa24.86■■□□□ 1.57
CDKN3-207ENST00000543789 HINFPQ9BQA5 517 aa24.86■■□□□ 1.57
CDKN3-207ENST00000543789 OSBPL6Q9BZF3 934 aa24.86■■□□□ 1.57
CDKN3-207ENST00000543789 FOXP1Q9H334 677 aaPredicted RBP24.86■■□□□ 1.57
CDKN3-207ENST00000543789 TNFSF13BQ9Y275 285 aa24.86■■□□□ 1.57
CDKN3-207ENST00000543789 MRPS23Q9Y3D9 190 aaKnown RBP24.86■■□□□ 1.57
CDKN3-207ENST00000543789 EP300Q09472 2414 aaPredicted RBP24.85■■□□□ 1.57
CDKN3-207ENST00000543789 MTCL1Q9Y4B5 1905 aaKnown RBP24.85■■□□□ 1.57
CDKN3-207ENST00000543789 SMIM28A0A1B0GU29 152 aa24.85■■□□□ 1.57
CDKN3-207ENST00000543789 FAM170BA6NMN3 283 aa24.85■■□□□ 1.57
CDKN3-207ENST00000543789 UBXN2BQ14CS0 331 aa24.85■■□□□ 1.57
CDKN3-207ENST00000543789 ING5Q8WYH8 240 aa24.85■■□□□ 1.57
CDKN3-207ENST00000543789 RUBCNQ92622 972 aa24.85■■□□□ 1.57
CDKN3-207ENST00000543789 DDX27Q96GQ7 796 aaKnown RBP24.85■■□□□ 1.57
CDKN3-207ENST00000543789 GOLGA2P5Q9HBQ8 144 aa24.85■■□□□ 1.57
CDKN3-207ENST00000543789 SPATA6Q9NWH7 488 aaPredicted RBP24.85■■□□□ 1.57
CDKN3-207ENST00000543789 GDE1Q9NZC3 331 aa24.85■■□□□ 1.57
CDKN3-207ENST00000543789 MTF2Q9Y483 593 aaPredicted RBP24.85■■□□□ 1.57
CDKN3-207ENST00000543789 DCHS1Q96JQ0 3298 aa24.84■■□□□ 1.57
CDKN3-207ENST00000543789 I3L4J1 428 aa24.84■■□□□ 1.57
CDKN3-207ENST00000543789 RHOP08100 348 aa24.84■■□□□ 1.57
CDKN3-207ENST00000543789 BRCC3P46736 316 aa24.84■■□□□ 1.57
CDKN3-207ENST00000543789 YARSP54577 528 aaKnown RBP24.84■■□□□ 1.57
CDKN3-207ENST00000543789 TTC38Q5R3I4 469 aa24.84■■□□□ 1.57
CDKN3-207ENST00000543789 C3orf58Q8NDZ4 430 aa24.84■■□□□ 1.57
CDKN3-207ENST00000543789 ZNF461Q8TAF7 563 aa24.84■■□□□ 1.57
CDKN3-207ENST00000543789 RMDN1Q96DB5 314 aa24.84■■□□□ 1.57
CDKN3-207ENST00000543789 MCRS1Q96EZ8 462 aa24.84■■□□□ 1.57
CDKN3-207ENST00000543789 BORCS6Q96GS4 357 aa24.84■■□□□ 1.57
CDKN3-207ENST00000543789 CCDC94Q9BW85 323 aaPredicted RBP24.84■■□□□ 1.57
CDKN3-207ENST00000543789 TOPORSQ9NS56 1045 aaPredicted RBP24.84■■□□□ 1.57
CDKN3-207ENST00000543789 KIAA1024Q9UPX6 916 aa24.84■■□□□ 1.57
CDKN3-207ENST00000543789 CCDC169A6NNP5 214 aa24.83■■□□□ 1.57
CDKN3-207ENST00000543789 LAMTOR5O43504 91 aa24.83■■□□□ 1.57
CDKN3-207ENST00000543789 ECI2O75521 394 aa24.83■■□□□ 1.57
CDKN3-207ENST00000543789 ELF1P32519 619 aa24.83■■□□□ 1.57
CDKN3-207ENST00000543789 GRM5P41594 1212 aa24.83■■□□□ 1.57
CDKN3-207ENST00000543789 FXR2P51116 673 aaKnown RBP eCLIP24.83■■□□□ 1.57
CDKN3-207ENST00000543789 ZNF528Q3MIS6 628 aa24.83■■□□□ 1.57
CDKN3-207ENST00000543789 ALKAL1Q6UXT8 129 aa24.83■■□□□ 1.57
CDKN3-207ENST00000543789 ACO2Q99798 780 aaKnown RBP24.83■■□□□ 1.57
CDKN3-207ENST00000543789 LTB4R2Q9NPC1 389 aa24.83■■□□□ 1.57
CDKN3-207ENST00000543789 AVENQ9NQS1 362 aaPredicted RBP24.83■■□□□ 1.57
CDKN3-207ENST00000543789 SLC38A7Q9NVC3 462 aa24.83■■□□□ 1.57
CDKN3-207ENST00000543789 LRWD1Q9UFC0 647 aa24.83■■□□□ 1.57
CDKN3-207ENST00000543789 FBXO4Q9UKT5 387 aa24.83■■□□□ 1.57
CDKN3-207ENST00000543789 KINO60870 393 aaKnown RBP24.82■■□□□ 1.56
CDKN3-207ENST00000543789 PTPN2P17706 415 aa24.82■■□□□ 1.56
CDKN3-207ENST00000543789 CD72P21854 359 aa24.82■■□□□ 1.56
CDKN3-207ENST00000543789 XKR4Q5GH76 650 aa24.82■■□□□ 1.56
CDKN3-207ENST00000543789 ZBTB41Q5SVQ8 909 aa24.82■■□□□ 1.56
CDKN3-207ENST00000543789 SLC8B1Q6J4K2 584 aa24.82■■□□□ 1.56
CDKN3-207ENST00000543789 C4orf32Q8N8J7 132 aa24.82■■□□□ 1.56
CDKN3-207ENST00000543789 NELL2Q99435 816 aa24.82■■□□□ 1.56
CDKN3-207ENST00000543789 PTPRHQ9HD43 1115 aa24.82■■□□□ 1.56
CDKN3-207ENST00000543789 LIMCH1Q9UPQ0 1083 aa24.82■■□□□ 1.56
CDKN3-207ENST00000543789 ARHGEF37A1IGU5 675 aa24.81■■□□□ 1.56
CDKN3-207ENST00000543789 EIF5BO60841 1220 aaKnown RBP24.81■■□□□ 1.56
CDKN3-207ENST00000543789 ABLIM3O94929 683 aa24.81■■□□□ 1.56
CDKN3-207ENST00000543789 LRG1P02750 347 aa24.81■■□□□ 1.56
CDKN3-207ENST00000543789 MAGEA9P43362 315 aa24.81■■□□□ 1.56
CDKN3-207ENST00000543789 NPTX2P47972 431 aa24.81■■□□□ 1.56
CDKN3-207ENST00000543789 TRAPPC10P48553 1259 aa24.81■■□□□ 1.56
CDKN3-207ENST00000543789 PEX3P56589 373 aa24.81■■□□□ 1.56
CDKN3-207ENST00000543789 OSTNP61366 133 aa24.81■■□□□ 1.56
CDKN3-207ENST00000543789 ROR1Q01973 937 aa24.81■■□□□ 1.56
CDKN3-207ENST00000543789 SOX4Q06945 474 aaPredicted RBP24.81■■□□□ 1.56
CDKN3-207ENST00000543789 GNL2Q13823 731 aaKnown RBP24.81■■□□□ 1.56
CDKN3-207ENST00000543789 PDIA5Q14554 519 aa24.81■■□□□ 1.56
CDKN3-207ENST00000543789 SLC5A9Q2M3M2 681 aa24.81■■□□□ 1.56
CDKN3-207ENST00000543789 VARS2Q5ST30 1063 aaKnown RBP24.81■■□□□ 1.56
CDKN3-207ENST00000543789 CEP120Q8N960 986 aa24.81■■□□□ 1.56
CDKN3-207ENST00000543789 SUMF1Q8NBK3 374 aa24.81■■□□□ 1.56
CDKN3-207ENST00000543789 FBXO18Q8NFZ0 1043 aa24.81■■□□□ 1.56
CDKN3-207ENST00000543789 LLPHQ9BRT6 129 aaKnown RBP24.81■■□□□ 1.56
CDKN3-207ENST00000543789 MRPL4Q9BYD3 311 aaKnown RBP24.81■■□□□ 1.56
CDKN3-207ENST00000543789 PLA2G2FQ9BZM2 168 aa24.81■■□□□ 1.56
CDKN3-207ENST00000543789 CDT1Q9H211 546 aa24.81■■□□□ 1.56
CDKN3-207ENST00000543789 TMEM134Q9H6X4 195 aa24.81■■□□□ 1.56
CDKN3-207ENST00000543789 DDX19AQ9NUU7 478 aaKnown RBP24.81■■□□□ 1.56
CDKN3-207ENST00000543789 STK24Q9Y6E0 443 aa24.81■■□□□ 1.56
CDKN3-207ENST00000543789 PODXLO00592 558 aa24.8■■□□□ 1.56
CDKN3-207ENST00000543789 PRRG1O14668 218 aa24.8■■□□□ 1.56
CDKN3-207ENST00000543789 NCAM2O15394 837 aa24.8■■□□□ 1.56
CDKN3-207ENST00000543789 CSTF1Q05048 431 aaKnown RBP24.8■■□□□ 1.56
CDKN3-207ENST00000543789 ZNF568Q3ZCX4 644 aa24.8■■□□□ 1.56
CDKN3-207ENST00000543789 TPRG1Q6ZUI0 275 aa24.8■■□□□ 1.56
CDKN3-207ENST00000543789 CCDC83Q8IWF9 413 aa24.8■■□□□ 1.56
CDKN3-207ENST00000543789 DCLK2Q8N568 766 aa24.8■■□□□ 1.56
CDKN3-207ENST00000543789 ACAP3Q96P50 834 aa24.8■■□□□ 1.56
CDKN3-207ENST00000543789 NOL7Q9UMY1 257 aaKnown RBP24.8■■□□□ 1.56
CDKN3-207ENST00000543789 DNM3Q9UQ16 869 aa24.8■■□□□ 1.56
CDKN3-207ENST00000543789 SYN3O14994 580 aa24.79■■□□□ 1.56
CDKN3-207ENST00000543789 ARPP19P56211 112 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms