RNA–Protein interactions for RNA: ENST00000543354.5

RPS6KC1-206, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 1 (best) BASIC

Gene RPS6KC1, Length 4,082 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-206ENST00000543354 STX1BP61266 288 aa14.61□□□□□ -0.07
RPS6KC1-206ENST00000543354 SNRNP35Q16560 246 aaKnown RBP14.61□□□□□ -0.07
RPS6KC1-206ENST00000543354 ANKRD20A4Q4UJ75 823 aa14.61□□□□□ -0.07
RPS6KC1-206ENST00000543354 ANKRD20A2Q5SQ80 823 aa14.61□□□□□ -0.07
RPS6KC1-206ENST00000543354 ANKRD20A1Q5TYW2 823 aa14.61□□□□□ -0.07
RPS6KC1-206ENST00000543354 CNKSR1Q969H4 720 aa14.61□□□□□ -0.07
RPS6KC1-206ENST00000543354 TMEM237Q96Q45 408 aa14.61□□□□□ -0.07
RPS6KC1-206ENST00000543354 RBAKQ9NYW8 714 aaPredicted RBP14.61□□□□□ -0.07
RPS6KC1-206ENST00000543354 RPS6KA4O75676 772 aa14.61□□□□□ -0.07
RPS6KC1-206ENST00000543354 TCN1P20061 433 aaPredicted RBP14.61□□□□□ -0.07
RPS6KC1-206ENST00000543354 RPA1P27694 616 aa14.61□□□□□ -0.07
RPS6KC1-206ENST00000543354 FXR2P51116 673 aaKnown RBP eCLIP14.61□□□□□ -0.07
RPS6KC1-206ENST00000543354 EVX2Q03828 476 aa14.61□□□□□ -0.07
RPS6KC1-206ENST00000543354 ALCAMQ13740 583 aa14.61□□□□□ -0.07
RPS6KC1-206ENST00000543354 ZNF699Q32M78 642 aa14.61□□□□□ -0.07
RPS6KC1-206ENST00000543354 FAM102AQ5T9C2 384 aaPredicted RBP14.61□□□□□ -0.07
RPS6KC1-206ENST00000543354 AADACL2Q6P093 401 aa14.61□□□□□ -0.07
RPS6KC1-206ENST00000543354 DCAF4Q8WV16 495 aa14.61□□□□□ -0.07
RPS6KC1-206ENST00000543354 SERPINI1Q99574 410 aa14.61□□□□□ -0.07
RPS6KC1-206ENST00000543354 EFHD1Q9BUP0 239 aa14.61□□□□□ -0.07
RPS6KC1-206ENST00000543354 PHTF1Q9UMS5 762 aa14.61□□□□□ -0.07
RPS6KC1-206ENST00000543354 TRAF3IP3Q9Y228 551 aa14.61□□□□□ -0.07
RPS6KC1-206ENST00000543354 MROH1Q8NDA8 1641 aa14.61□□□□□ -0.07
RPS6KC1-206ENST00000543354 ATP6V1G2O95670 118 aa14.61□□□□□ -0.07
RPS6KC1-206ENST00000543354 GGPS1O95749 300 aa14.61□□□□□ -0.07
RPS6KC1-206ENST00000543354 EIF3EP60228 445 aaKnown RBP14.61□□□□□ -0.07
RPS6KC1-206ENST00000543354 IRX1P78414 480 aaPredicted RBP14.61□□□□□ -0.07
RPS6KC1-206ENST00000543354 DEUP1Q05D60 604 aa14.61□□□□□ -0.07
RPS6KC1-206ENST00000543354 TFDP2Q14188 446 aa14.61□□□□□ -0.07
RPS6KC1-206ENST00000543354 FAXCQ5TGI0 409 aa14.61□□□□□ -0.07
RPS6KC1-206ENST00000543354 TRPV6Q9H1D0 765 aa14.61□□□□□ -0.07
RPS6KC1-206ENST00000543354 HEY2Q9UBP5 337 aa14.61□□□□□ -0.07
RPS6KC1-206ENST00000543354 PTPRUQ92729 1446 aa14.61□□□□□ -0.07
RPS6KC1-206ENST00000543354 RNF103-CHMP3A0A140T963 221 aa14.61□□□□□ -0.07
RPS6KC1-206ENST00000543354 SGPL1O95470 568 aa14.61□□□□□ -0.07
RPS6KC1-206ENST00000543354 POU5F1BQ06416 359 aa14.61□□□□□ -0.07
RPS6KC1-206ENST00000543354 MED21Q13503 144 aa14.61□□□□□ -0.07
RPS6KC1-206ENST00000543354 HIC1Q14526 733 aa14.61□□□□□ -0.07
RPS6KC1-206ENST00000543354 CRYMQ14894 314 aa14.61□□□□□ -0.07
RPS6KC1-206ENST00000543354 C4orf50Q6ZRC1 276 aa14.61□□□□□ -0.07
RPS6KC1-206ENST00000543354 ATP8B4Q8TF62 1192 aa14.61□□□□□ -0.07
RPS6KC1-206ENST00000543354 ZKSCAN4Q969J2 545 aaPredicted RBP14.61□□□□□ -0.07
RPS6KC1-206ENST00000543354 MCEEQ96PE7 176 aa14.61□□□□□ -0.07
RPS6KC1-206ENST00000543354 ABCF3Q9NUQ8 709 aa14.61□□□□□ -0.07
RPS6KC1-206ENST00000543354 SEC24DO94855 1032 aaPredicted RBP14.6□□□□□ -0.07
RPS6KC1-206ENST00000543354 ISLR2Q6UXK2 745 aa14.6□□□□□ -0.07
RPS6KC1-206ENST00000543354 PDZD4Q76G19 769 aaPredicted RBP14.6□□□□□ -0.07
RPS6KC1-206ENST00000543354 TMC3Q7Z5M5 1100 aa14.6□□□□□ -0.07
RPS6KC1-206ENST00000543354 ICA1LQ8NDH6 482 aa14.6□□□□□ -0.07
RPS6KC1-206ENST00000543354 OR6B3Q8NGW1 331 aa14.6□□□□□ -0.07
RPS6KC1-206ENST00000543354 SYN2Q92777 582 aaPredicted RBP14.6□□□□□ -0.07
RPS6KC1-206ENST00000543354 AGAP3Q96P47 875 aa14.6□□□□□ -0.07
RPS6KC1-206ENST00000543354 ZSWIM1Q9BR11 485 aa14.6□□□□□ -0.07
RPS6KC1-206ENST00000543354 TCRBV5S4A2TA0A5A2 114 aa14.6□□□□□ -0.07
RPS6KC1-206ENST00000543354 PALM3A6NDB9 673 aaPredicted RBP14.6□□□□□ -0.07
RPS6KC1-206ENST00000543354 MED7O43513 233 aa14.6□□□□□ -0.07
RPS6KC1-206ENST00000543354 PRAMEP78395 509 aa14.6□□□□□ -0.07
RPS6KC1-206ENST00000543354 RSBN1LQ6PCB5 846 aaPredicted RBP14.6□□□□□ -0.07
RPS6KC1-206ENST00000543354 SH3RF1Q7Z6J0 888 aa14.6□□□□□ -0.07
RPS6KC1-206ENST00000543354 RNF135Q8IUD6 432 aa14.6□□□□□ -0.07
RPS6KC1-206ENST00000543354 GALNT4Q8N4A0 578 aa14.6□□□□□ -0.07
RPS6KC1-206ENST00000543354 TTC13Q8NBP0 860 aa14.6□□□□□ -0.07
RPS6KC1-206ENST00000543354 CCDC68Q9H2F9 335 aa14.6□□□□□ -0.07
RPS6KC1-206ENST00000543354 GTSE1Q9NYZ3 720 aa14.6□□□□□ -0.07
RPS6KC1-206ENST00000543354 THEGQ9P2T0 379 aa14.6□□□□□ -0.07
RPS6KC1-206ENST00000543354 UVRAGQ9P2Y5 699 aa14.6□□□□□ -0.07
RPS6KC1-206ENST00000543354 WARS2Q9UGM6 360 aaKnown RBP14.6□□□□□ -0.07
RPS6KC1-206ENST00000543354 PSAPP07602 524 aa14.6□□□□□ -0.07
RPS6KC1-206ENST00000543354 PPP1R18Q6NYC8 613 aa14.6□□□□□ -0.07
RPS6KC1-206ENST00000543354 GADL1Q6ZQY3 521 aa14.6□□□□□ -0.07
RPS6KC1-206ENST00000543354 SLC5A5Q92911 643 aa14.6□□□□□ -0.07
RPS6KC1-206ENST00000543354 FAM111AQ96PZ2 611 aa14.6□□□□□ -0.07
RPS6KC1-206ENST00000543354 POP1Q99575 1024 aaKnown RBP14.6□□□□□ -0.07
RPS6KC1-206ENST00000543354 GPRC5CQ9NQ84 441 aa14.6□□□□□ -0.07
RPS6KC1-206ENST00000543354 AGPAT3Q9NRZ7 376 aa14.6□□□□□ -0.07
RPS6KC1-206ENST00000543354 PCMTD2Q9NV79 361 aa14.6□□□□□ -0.07
RPS6KC1-206ENST00000543354 KLHL8Q9P2G9 620 aaPredicted RBP14.6□□□□□ -0.07
RPS6KC1-206ENST00000543354 IP6K2Q9UHH9 426 aa14.6□□□□□ -0.07
RPS6KC1-206ENST00000543354 AGO2Q9UKV8 859 aaKnown RBP14.6□□□□□ -0.07
RPS6KC1-206ENST00000543354 LMTK2Q8IWU2 1503 aa14.59□□□□□ -0.07
RPS6KC1-206ENST00000543354 CST8O60676 142 aa14.59□□□□□ -0.07
RPS6KC1-206ENST00000543354 CAMTA2O94983 1202 aa14.59□□□□□ -0.07
RPS6KC1-206ENST00000543354 RARGP13631 454 aa14.59□□□□□ -0.07
RPS6KC1-206ENST00000543354 YY1P25490 414 aa14.59□□□□□ -0.07
RPS6KC1-206ENST00000543354 CDK17Q00537 523 aa14.59□□□□□ -0.07
RPS6KC1-206ENST00000543354 COG2Q14746 738 aa14.59□□□□□ -0.07
RPS6KC1-206ENST00000543354 MEA1Q16626 185 aa14.59□□□□□ -0.07
RPS6KC1-206ENST00000543354 MIS18BP1Q6P0N0 1132 aa14.59□□□□□ -0.07
RPS6KC1-206ENST00000543354 NLRP9Q7RTR0 991 aa14.59□□□□□ -0.07
RPS6KC1-206ENST00000543354 FBXO33Q7Z6M2 555 aa14.59□□□□□ -0.07
RPS6KC1-206ENST00000543354 NAF1Q96HR8 494 aaKnown RBP14.59□□□□□ -0.07
RPS6KC1-206ENST00000543354 CBWD1Q9BRT8 395 aa14.59□□□□□ -0.07
RPS6KC1-206ENST00000543354 WWP1Q9H0M0 922 aa14.59□□□□□ -0.07
RPS6KC1-206ENST00000543354 RANBP17Q9H2T7 1088 aaKnown RBP14.59□□□□□ -0.07
RPS6KC1-206ENST00000543354 SMG5Q9UPR3 1016 aaKnown RBP14.59□□□□□ -0.07
RPS6KC1-206ENST00000543354 DLC1Q96QB1 1528 aa14.59□□□□□ -0.07
RPS6KC1-206ENST00000543354 GNGT2O14610 69 aa14.59□□□□□ -0.07
RPS6KC1-206ENST00000543354 AMPD2Q01433 879 aa14.59□□□□□ -0.07
RPS6KC1-206ENST00000543354 PRPSAP1Q14558 356 aa14.59□□□□□ -0.07
RPS6KC1-206ENST00000543354 WDR72Q3MJ13 1102 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms