RNA–Protein interactions for RNA: ENST00000543004.5

OTUB1-211, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,647 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-211ENST00000543004 SOX4Q06945 474 aaPredicted RBP22.57■■□□□ 1.2
OTUB1-211ENST00000543004 PSMD6Q15008 389 aa22.57■■□□□ 1.2
OTUB1-211ENST00000543004 C1orf220Q5T0J3 134 aa22.57■■□□□ 1.2
OTUB1-211ENST00000543004 PARD3BQ8TEW8 1205 aa22.57■■□□□ 1.2
OTUB1-211ENST00000543004 KIF12Q96FN5 646 aa22.57■■□□□ 1.2
OTUB1-211ENST00000543004 PPP1R10Q96QC0 940 aaKnown RBP22.57■■□□□ 1.2
OTUB1-211ENST00000543004 MKNK1Q9BUB5 465 aa22.57■■□□□ 1.2
OTUB1-211ENST00000543004 GOLGA2P5Q9HBQ8 144 aa22.57■■□□□ 1.2
OTUB1-211ENST00000543004 RNF216Q9NWF9 866 aaPredicted RBP22.57■■□□□ 1.2
OTUB1-211ENST00000543004 TUBGCP4Q9UGJ1 667 aa22.57■■□□□ 1.2
OTUB1-211ENST00000543004 CHD7Q9P2D1 2997 aa22.56■■□□□ 1.2
OTUB1-211ENST00000543004 LRRIQ3A6PVS8 624 aaPredicted RBP22.56■■□□□ 1.2
OTUB1-211ENST00000543004 KCNE1P15382 129 aa22.56■■□□□ 1.2
OTUB1-211ENST00000543004 CCDC40Q4G0X9 1142 aa22.56■■□□□ 1.2
OTUB1-211ENST00000543004 OR5B17Q8NGF7 314 aa22.56■■□□□ 1.2
OTUB1-211ENST00000543004 ZNF516Q92618 1163 aa22.56■■□□□ 1.2
OTUB1-211ENST00000543004 RABGGTAQ92696 567 aa22.56■■□□□ 1.2
OTUB1-211ENST00000543004 CNOT6LQ96LI5 555 aaKnown RBP22.56■■□□□ 1.2
OTUB1-211ENST00000543004 ASB7Q9H672 318 aa22.56■■□□□ 1.2
OTUB1-211ENST00000543004 DNAJB4Q9UDY4 337 aa22.56■■□□□ 1.2
OTUB1-211ENST00000543004 MAPK13O15264 365 aa22.55■■□□□ 1.2
OTUB1-211ENST00000543004 ARHGEF15O94989 841 aa22.55■■□□□ 1.2
OTUB1-211ENST00000543004 IL18RAPO95256 599 aa22.55■■□□□ 1.2
OTUB1-211ENST00000543004 THP07101 528 aa22.55■■□□□ 1.2
OTUB1-211ENST00000543004 VAMP7P51809 220 aa22.55■■□□□ 1.2
OTUB1-211ENST00000543004 POU5F1Q01860 360 aaKnown RBP22.55■■□□□ 1.2
OTUB1-211ENST00000543004 BFSP1Q12934 665 aa22.55■■□□□ 1.2
OTUB1-211ENST00000543004 BTG3Q14201 252 aaPredicted RBP22.55■■□□□ 1.2
OTUB1-211ENST00000543004 ZBTB6Q15916 424 aa22.55■■□□□ 1.2
OTUB1-211ENST00000543004 GAS2L3Q86XJ1 694 aa22.55■■□□□ 1.2
OTUB1-211ENST00000543004 URGCPQ8TCY9 931 aa22.55■■□□□ 1.2
OTUB1-211ENST00000543004 RAD9AQ99638 391 aa22.55■■□□□ 1.2
OTUB1-211ENST00000543004 PAAF1Q9BRP4 392 aa22.55■■□□□ 1.2
OTUB1-211ENST00000543004 THAP9Q9H5L6 903 aa22.55■■□□□ 1.2
OTUB1-211ENST00000543004 ARMCX3Q9UH62 379 aaPredicted RBP22.55■■□□□ 1.2
OTUB1-211ENST00000543004 INSL6Q9Y581 213 aa22.55■■□□□ 1.2
OTUB1-211ENST00000543004 CDH23Q9H251 3354 aa22.55■■□□□ 1.2
OTUB1-211ENST00000543004 TRIOBPQ9H2D6 2365 aa22.54■■□□□ 1.2
OTUB1-211ENST00000543004 TFAMQ00059 246 aaKnown RBP22.54■■□□□ 1.2
OTUB1-211ENST00000543004 RNASELQ05823 741 aaKnown RBP22.54■■□□□ 1.2
OTUB1-211ENST00000543004 TMEM132DQ14C87 1099 aa22.54■■□□□ 1.2
OTUB1-211ENST00000543004 INTS8Q75QN2 995 aaKnown RBP22.54■■□□□ 1.2
OTUB1-211ENST00000543004 SPRED2Q7Z698 418 aa22.54■■□□□ 1.2
OTUB1-211ENST00000543004 RNF214Q8ND24 703 aa22.54■■□□□ 1.2
OTUB1-211ENST00000543004 NRDE2Q9H7Z3 1164 aa22.54■■□□□ 1.2
OTUB1-211ENST00000543004 YBX2Q9Y2T7 364 aaKnown RBP22.54■■□□□ 1.2
OTUB1-211ENST00000543004 MRPL42Q9Y6G3 142 aaKnown RBP22.54■■□□□ 1.2
OTUB1-211ENST00000543004 NLRC5Q86WI3 1866 aa22.54■■□□□ 1.2
OTUB1-211ENST00000543004 IKBKBO14920 756 aa22.53■■□□□ 1.2
OTUB1-211ENST00000543004 TNNI1P19237 187 aa22.53■■□□□ 1.2
OTUB1-211ENST00000543004 IGFBP6P24592 240 aaPredicted RBP22.53■■□□□ 1.2
OTUB1-211ENST00000543004 PBX3P40426 434 aa22.53■■□□□ 1.2
OTUB1-211ENST00000543004 GRIK3Q13003 919 aa22.53■■□□□ 1.2
OTUB1-211ENST00000543004 DCAF17Q5H9S7 520 aaPredicted RBP22.53■■□□□ 1.2
OTUB1-211ENST00000543004 CDKAL1Q5VV42 579 aa22.53■■□□□ 1.2
OTUB1-211ENST00000543004 FRMD5Q7Z6J6 570 aa22.53■■□□□ 1.2
OTUB1-211ENST00000543004 CD302Q8IX05 232 aa22.53■■□□□ 1.2
OTUB1-211ENST00000543004 FAM200AQ8TCP9 573 aa22.53■■□□□ 1.2
OTUB1-211ENST00000543004 FNBP1Q96RU3 617 aa22.53■■□□□ 1.2
OTUB1-211ENST00000543004 CGRRF1Q99675 332 aa22.53■■□□□ 1.2
OTUB1-211ENST00000543004 PBX4Q9BYU1 374 aa22.53■■□□□ 1.2
OTUB1-211ENST00000543004 MTMR12Q9C0I1 747 aa22.53■■□□□ 1.2
OTUB1-211ENST00000543004 CWH43Q9H720 699 aa22.53■■□□□ 1.2
OTUB1-211ENST00000543004 MMRN2Q9H8L6 949 aa22.53■■□□□ 1.2
OTUB1-211ENST00000543004 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.53■■□□□ 1.2
OTUB1-211ENST00000543004 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.53■■□□□ 1.2
OTUB1-211ENST00000543004 CASTOR2A6NHX0 329 aa22.53■■□□□ 1.2
OTUB1-211ENST00000543004 FGFR1OPO95684 399 aaKnown RBP22.53■■□□□ 1.2
OTUB1-211ENST00000543004 KRT13P13646 458 aa22.53■■□□□ 1.2
OTUB1-211ENST00000543004 PPP3CAQ08209 521 aa22.53■■□□□ 1.2
OTUB1-211ENST00000543004 TCERG1LQ5VWI1 586 aa22.53■■□□□ 1.2
OTUB1-211ENST00000543004 CMTR2Q8IYT2 770 aaKnown RBP22.53■■□□□ 1.2
OTUB1-211ENST00000543004 LRRC43Q8N309 656 aa22.53■■□□□ 1.2
OTUB1-211ENST00000543004 TMC2Q8TDI7 906 aa22.53■■□□□ 1.2
OTUB1-211ENST00000543004 INTS13Q9NVM9 706 aa22.53■■□□□ 1.2
OTUB1-211ENST00000543004 BECN2A8MW95 431 aa22.52■■□□□ 1.2
OTUB1-211ENST00000543004 F8W810 466 aa22.52■■□□□ 1.2
OTUB1-211ENST00000543004 ATP1A3P13637 1013 aa22.52■■□□□ 1.2
OTUB1-211ENST00000543004 MARSP56192 900 aaKnown RBP22.52■■□□□ 1.2
OTUB1-211ENST00000543004 DSC1Q08554 894 aa22.52■■□□□ 1.2
OTUB1-211ENST00000543004 PRPF38BQ5VTL8 546 aaKnown RBP22.52■■□□□ 1.2
OTUB1-211ENST00000543004 WDR49Q8IV35 697 aa22.52■■□□□ 1.2
OTUB1-211ENST00000543004 TRIM59Q8IWR1 403 aa22.52■■□□□ 1.2
OTUB1-211ENST00000543004 SP7Q8TDD2 431 aaPredicted RBP22.52■■□□□ 1.2
OTUB1-211ENST00000543004 SLC35C1Q96A29 364 aa22.52■■□□□ 1.2
OTUB1-211ENST00000543004 MRPL9Q9BYD2 267 aaKnown RBP22.52■■□□□ 1.2
OTUB1-211ENST00000543004 KANSL3Q9P2N6 904 aa22.52■■□□□ 1.2
OTUB1-211ENST00000543004 C2CD2Q9Y426 696 aa22.52■■□□□ 1.2
OTUB1-211ENST00000543004 SCN1AP35498 2009 aa22.51■■□□□ 1.19
OTUB1-211ENST00000543004 KCNJ18B7U540 433 aa22.51■■□□□ 1.19
OTUB1-211ENST00000543004 ZC3H11AO75152 810 aaKnown RBP eCLIP22.51■■□□□ 1.19
OTUB1-211ENST00000543004 GNA14O95837 355 aa22.51■■□□□ 1.19
OTUB1-211ENST00000543004 CA3P07451 260 aa22.51■■□□□ 1.19
OTUB1-211ENST00000543004 LINC00271P0C7V0 271 aa22.51■■□□□ 1.19
OTUB1-211ENST00000543004 ZNF18P17022 549 aa22.51■■□□□ 1.19
OTUB1-211ENST00000543004 GCLMP48507 274 aa22.51■■□□□ 1.19
OTUB1-211ENST00000543004 CLDN10P78369 228 aa22.51■■□□□ 1.19
OTUB1-211ENST00000543004 KCNJ12Q14500 433 aa22.51■■□□□ 1.19
OTUB1-211ENST00000543004 SURF1Q15526 300 aa22.51■■□□□ 1.19
OTUB1-211ENST00000543004 COLGALT2Q8IYK4 626 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms