RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 CACNG4Q9UBN1 327 aa11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 PARP2Q9UGN5 583 aa11.6□□□□□ -0.55
NPIPB3-210ENST00000542817 CITO14578 2027 aa11.59□□□□□ -0.55
NPIPB3-210ENST00000542817 RALGAPA2Q2PPJ7 1873 aa11.59□□□□□ -0.55
NPIPB3-210ENST00000542817 POMCP01189 267 aa11.59□□□□□ -0.55
NPIPB3-210ENST00000542817 KCNJ6P48051 423 aa11.59□□□□□ -0.55
NPIPB3-210ENST00000542817 MYL5Q02045 173 aa11.59□□□□□ -0.55
NPIPB3-210ENST00000542817 ENPEPQ07075 957 aa11.59□□□□□ -0.55
NPIPB3-210ENST00000542817 PPP3CAQ08209 521 aa11.59□□□□□ -0.55
NPIPB3-210ENST00000542817 HSP90AA4PQ58FG1 418 aa11.59□□□□□ -0.55
NPIPB3-210ENST00000542817 NOMO2Q5JPE7 1267 aa11.59□□□□□ -0.55
NPIPB3-210ENST00000542817 LMBRD2Q68DH5 695 aaPredicted RBP11.59□□□□□ -0.55
NPIPB3-210ENST00000542817 FRMD5Q7Z6J6 570 aa11.59□□□□□ -0.55
NPIPB3-210ENST00000542817 TRIM59Q8IWR1 403 aa11.59□□□□□ -0.55
NPIPB3-210ENST00000542817 TDHQ8IZJ6 230 aa11.59□□□□□ -0.55
NPIPB3-210ENST00000542817 FAM200AQ8TCP9 573 aa11.59□□□□□ -0.55
NPIPB3-210ENST00000542817 TMC2Q8TDI7 906 aa11.59□□□□□ -0.55
NPIPB3-210ENST00000542817 SLC35C1Q96A29 364 aa11.59□□□□□ -0.55
NPIPB3-210ENST00000542817 PAAF1Q9BRP4 392 aa11.59□□□□□ -0.55
NPIPB3-210ENST00000542817 TSPY26PQ9H489 355 aa11.59□□□□□ -0.55
NPIPB3-210ENST00000542817 ASB7Q9H672 318 aa11.59□□□□□ -0.55
NPIPB3-210ENST00000542817 UBN1Q9NPG3 1134 aa11.59□□□□□ -0.55
NPIPB3-210ENST00000542817 TUBGCP4Q9UGJ1 667 aa11.59□□□□□ -0.55
NPIPB3-210ENST00000542817 SIX4Q9UIU6 781 aa11.59□□□□□ -0.55
NPIPB3-210ENST00000542817 YBX2Q9Y2T7 364 aaKnown RBP11.59□□□□□ -0.55
NPIPB3-210ENST00000542817 XIRP2A4UGR9 3374 aa11.58□□□□□ -0.56
NPIPB3-210ENST00000542817 PDCD11Q14690 1871 aaKnown RBP11.58□□□□□ -0.56
NPIPB3-210ENST00000542817 TBKBP1A7MCY6 615 aa11.58□□□□□ -0.56
NPIPB3-210ENST00000542817 F8W810 466 aa11.58□□□□□ -0.56
NPIPB3-210ENST00000542817 PPEF2O14830 753 aa11.58□□□□□ -0.56
NPIPB3-210ENST00000542817 LRRN2O75325 713 aa11.58□□□□□ -0.56
NPIPB3-210ENST00000542817 EFEMP2O95967 443 aa11.58□□□□□ -0.56
NPIPB3-210ENST00000542817 C4BPAP04003 597 aaKnown RBP11.58□□□□□ -0.56
NPIPB3-210ENST00000542817 TRIM49P0CI25 452 aa11.58□□□□□ -0.56
NPIPB3-210ENST00000542817 TRIM49CP0CI26 452 aa11.58□□□□□ -0.56
NPIPB3-210ENST00000542817 ATP1A3P13637 1013 aa11.58□□□□□ -0.56
NPIPB3-210ENST00000542817 PBX2P40425 430 aa11.58□□□□□ -0.56
NPIPB3-210ENST00000542817 VAMP7P51809 220 aa11.58□□□□□ -0.56
NPIPB3-210ENST00000542817 BFSP1Q12934 665 aa11.58□□□□□ -0.56
NPIPB3-210ENST00000542817 MIIPQ5JXC2 388 aa11.58□□□□□ -0.56
NPIPB3-210ENST00000542817 GLB1LQ6UWU2 654 aa11.58□□□□□ -0.56
NPIPB3-210ENST00000542817 APBB1IPQ7Z5R6 666 aaPredicted RBP11.58□□□□□ -0.56
NPIPB3-210ENST00000542817 COLGALT2Q8IYK4 626 aa11.58□□□□□ -0.56
NPIPB3-210ENST00000542817 C1orf127Q8N9H9 656 aa11.58□□□□□ -0.56
NPIPB3-210ENST00000542817 CCDC127Q96BQ5 260 aa11.58□□□□□ -0.56
NPIPB3-210ENST00000542817 CNOT6LQ96LI5 555 aaKnown RBP11.58□□□□□ -0.56
NPIPB3-210ENST00000542817 RAD9AQ99638 391 aa11.58□□□□□ -0.56
NPIPB3-210ENST00000542817 RBSNQ9H1K0 784 aa11.58□□□□□ -0.56
NPIPB3-210ENST00000542817 NRDE2Q9H7Z3 1164 aa11.58□□□□□ -0.56
NPIPB3-210ENST00000542817 GOLGA2P5Q9HBQ8 144 aa11.58□□□□□ -0.56
NPIPB3-210ENST00000542817 DNAJB4Q9UDY4 337 aa11.58□□□□□ -0.56
NPIPB3-210ENST00000542817 LRFN2Q9ULH4 789 aa11.58□□□□□ -0.56
NPIPB3-210ENST00000542817 COLQQ9Y215 455 aaPredicted RBP11.58□□□□□ -0.56
NPIPB3-210ENST00000542817 INPP5FQ9Y2H2 1132 aa11.58□□□□□ -0.56
NPIPB3-210ENST00000542817 DERAQ9Y315 318 aa11.58□□□□□ -0.56
NPIPB3-210ENST00000542817 C2CD2Q9Y426 696 aa11.58□□□□□ -0.56
NPIPB3-210ENST00000542817 MRPL42Q9Y6G3 142 aaKnown RBP11.58□□□□□ -0.56
NPIPB3-210ENST00000542817 PRUNE2Q8WUY3 3088 aa11.57□□□□□ -0.56
NPIPB3-210ENST00000542817 LRRC10BA6NIK2 292 aa11.57□□□□□ -0.56
NPIPB3-210ENST00000542817 IL18RAPO95256 599 aa11.57□□□□□ -0.56
NPIPB3-210ENST00000542817 VNN1O95497 513 aa11.57□□□□□ -0.56
NPIPB3-210ENST00000542817 CAVIN2O95810 425 aa11.57□□□□□ -0.56
NPIPB3-210ENST00000542817 DLATP10515 647 aaKnown RBP11.57□□□□□ -0.56
NPIPB3-210ENST00000542817 EPB41P11171 864 aaKnown RBP11.57□□□□□ -0.56
NPIPB3-210ENST00000542817 LRPAP1P30533 357 aa11.57□□□□□ -0.56
NPIPB3-210ENST00000542817 YARSP54577 528 aaKnown RBP11.57□□□□□ -0.56
NPIPB3-210ENST00000542817 PPP2R3AQ06190 1150 aa11.57□□□□□ -0.56
NPIPB3-210ENST00000542817 CBWD6Q4V339 395 aa11.57□□□□□ -0.56
NPIPB3-210ENST00000542817 PAN2Q504Q3 1202 aaKnown RBP11.57□□□□□ -0.56
NPIPB3-210ENST00000542817 TCP11X2Q5H9J9 407 aa11.57□□□□□ -0.56
NPIPB3-210ENST00000542817 CBWD3Q5JTY5 395 aa11.57□□□□□ -0.56
NPIPB3-210ENST00000542817 CBWD5Q5RIA9 395 aa11.57□□□□□ -0.56
NPIPB3-210ENST00000542817 TDRD10Q5VZ19 366 aaKnown RBP11.57□□□□□ -0.56
NPIPB3-210ENST00000542817 DPY19L2P1Q6NXN4 242 aa11.57□□□□□ -0.56
NPIPB3-210ENST00000542817 INTS8Q75QN2 995 aaKnown RBP11.57□□□□□ -0.56
NPIPB3-210ENST00000542817 TMEM173Q86WV6 379 aaPredicted RBP11.57□□□□□ -0.56
NPIPB3-210ENST00000542817 CD302Q8IX05 232 aa11.57□□□□□ -0.56
NPIPB3-210ENST00000542817 CMTR2Q8IYT2 770 aaKnown RBP11.57□□□□□ -0.56
NPIPB3-210ENST00000542817 HACE1Q8IYU2 909 aa11.57□□□□□ -0.56
NPIPB3-210ENST00000542817 C3orf58Q8NDZ4 430 aa11.57□□□□□ -0.56
NPIPB3-210ENST00000542817 NOC3LQ8WTT2 800 aaKnown RBP11.57□□□□□ -0.56
NPIPB3-210ENST00000542817 BCL7CQ8WUZ0 217 aaPredicted RBP11.57□□□□□ -0.56
NPIPB3-210ENST00000542817 CLP1Q92989 425 aaKnown RBP11.57□□□□□ -0.56
NPIPB3-210ENST00000542817 CGRRF1Q99675 332 aa11.57□□□□□ -0.56
NPIPB3-210ENST00000542817 PBX4Q9BYU1 374 aa11.57□□□□□ -0.56
NPIPB3-210ENST00000542817 MTMR12Q9C0I1 747 aa11.57□□□□□ -0.56
NPIPB3-210ENST00000542817 NAT10Q9H0A0 1025 aaKnown RBP11.57□□□□□ -0.56
NPIPB3-210ENST00000542817 INTS13Q9NVM9 706 aa11.57□□□□□ -0.56
NPIPB3-210ENST00000542817 ARMCX3Q9UH62 379 aaPredicted RBP11.57□□□□□ -0.56
NPIPB3-210ENST00000542817 FRMD4BQ9Y2L6 1034 aa11.57□□□□□ -0.56
NPIPB3-210ENST00000542817 ANO9A1A5B4 782 aa11.56□□□□□ -0.56
NPIPB3-210ENST00000542817 PIRO00625 290 aa11.56□□□□□ -0.56
NPIPB3-210ENST00000542817 AP5Z1O43299 807 aa11.56□□□□□ -0.56
NPIPB3-210ENST00000542817 HOXA2O43364 376 aa11.56□□□□□ -0.56
NPIPB3-210ENST00000542817 GNA14O95837 355 aa11.56□□□□□ -0.56
NPIPB3-210ENST00000542817 CST3P01034 146 aaPredicted RBP11.56□□□□□ -0.56
NPIPB3-210ENST00000542817 ITGB1P05556 798 aa11.56□□□□□ -0.56
NPIPB3-210ENST00000542817 THP07101 528 aa11.56□□□□□ -0.56
NPIPB3-210ENST00000542817 CYP3A5P20815 502 aa11.56□□□□□ -0.56
NPIPB3-210ENST00000542817 PBX3P40426 434 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms