RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 RIN2Q8WYP3 895 aaPredicted RBP3.33□□□□□ -1.88
KNTC1-213ENST00000542727 ANKS1AQ92625 1134 aa3.33□□□□□ -1.88
KNTC1-213ENST00000542727 USP7Q93009 1102 aa3.33□□□□□ -1.88
KNTC1-213ENST00000542727 FATE1Q969F0 183 aa3.33□□□□□ -1.88
KNTC1-213ENST00000542727 EAF2Q96CJ1 260 aaPredicted RBP3.33□□□□□ -1.88
KNTC1-213ENST00000542727 RNF31Q96EP0 1072 aa3.33□□□□□ -1.88
KNTC1-213ENST00000542727 PHACTR3Q96KR7 559 aa3.33□□□□□ -1.88
KNTC1-213ENST00000542727 MED15Q96RN5 788 aa3.33□□□□□ -1.88
KNTC1-213ENST00000542727 UHRF1Q96T88 793 aaPredicted RBP3.33□□□□□ -1.88
KNTC1-213ENST00000542727 MRI1Q9BV20 369 aa3.33□□□□□ -1.88
KNTC1-213ENST00000542727 PRDM12Q9H4Q4 367 aa3.33□□□□□ -1.88
KNTC1-213ENST00000542727 IFT22Q9H7X7 185 aa3.33□□□□□ -1.88
KNTC1-213ENST00000542727 CASS4Q9NQ75 786 aa3.33□□□□□ -1.88
KNTC1-213ENST00000542727 LANCL2Q9NS86 450 aa3.33□□□□□ -1.88
KNTC1-213ENST00000542727 RBM12Q9NTZ6 932 aaKnown RBP3.33□□□□□ -1.88
KNTC1-213ENST00000542727 APOBEC2Q9Y235 224 aaKnown RBP3.33□□□□□ -1.88
KNTC1-213ENST00000542727 ATRNL1Q5VV63 1379 aa3.33□□□□□ -1.88
KNTC1-213ENST00000542727 CCDC151A5D8V7 595 aa3.32□□□□□ -1.88
KNTC1-213ENST00000542727 ADCY6O43306 1168 aa3.32□□□□□ -1.88
KNTC1-213ENST00000542727 RBMXL2O75526 392 aaKnown RBP3.32□□□□□ -1.88
KNTC1-213ENST00000542727 GPANK1O95872 356 aa3.32□□□□□ -1.88
KNTC1-213ENST00000542727 ERBB2P04626 1255 aa3.32□□□□□ -1.88
KNTC1-213ENST00000542727 FGFR4P22455 802 aa3.32□□□□□ -1.88
KNTC1-213ENST00000542727 GUCY1A2P33402 732 aa3.32□□□□□ -1.88
KNTC1-213ENST00000542727 SREBF1P36956 1147 aa3.32□□□□□ -1.88
KNTC1-213ENST00000542727 PLA2G5P39877 138 aa3.32□□□□□ -1.88
KNTC1-213ENST00000542727 GYS2P54840 703 aa3.32□□□□□ -1.88
KNTC1-213ENST00000542727 PER3P56645 1201 aa3.32□□□□□ -1.88
KNTC1-213ENST00000542727 RAP2BP61225 183 aa3.32□□□□□ -1.88
KNTC1-213ENST00000542727 FAPQ12884 760 aa3.32□□□□□ -1.88
KNTC1-213ENST00000542727 FOXF2Q12947 444 aa3.32□□□□□ -1.88
KNTC1-213ENST00000542727 PDCD1Q15116 288 aa3.32□□□□□ -1.88
KNTC1-213ENST00000542727 ADRM1Q16186 407 aa3.32□□□□□ -1.88
KNTC1-213ENST00000542727 MUM1L1Q5H9M0 696 aa3.32□□□□□ -1.88
KNTC1-213ENST00000542727 EPHA10Q5JZY3 1008 aa3.32□□□□□ -1.88
KNTC1-213ENST00000542727 ZNF362Q5T0B9 420 aaPredicted RBP3.32□□□□□ -1.88
KNTC1-213ENST00000542727 PAPD7Q5XG87 772 aaKnown RBP3.32□□□□□ -1.88
KNTC1-213ENST00000542727 AFMIDQ63HM1 303 aa3.32□□□□□ -1.88
KNTC1-213ENST00000542727 MICALCLQ6ZW33 695 aa3.32□□□□□ -1.88
KNTC1-213ENST00000542727 KIAA0907Q7Z7F0 614 aaPredicted RBP3.32□□□□□ -1.88
KNTC1-213ENST00000542727 GLCCI1Q86VQ1 547 aa3.32□□□□□ -1.88
KNTC1-213ENST00000542727 LNX2Q8N448 690 aa3.32□□□□□ -1.88
KNTC1-213ENST00000542727 ACTRT2Q8TDY3 377 aa3.32□□□□□ -1.88
KNTC1-213ENST00000542727 PDLIM2Q96JY6 352 aa3.32□□□□□ -1.88
KNTC1-213ENST00000542727 TTC1Q99614 292 aa3.32□□□□□ -1.88
KNTC1-213ENST00000542727 GREM2Q9H772 168 aa3.32□□□□□ -1.88
KNTC1-213ENST00000542727 TMEM140Q9NV12 185 aa3.32□□□□□ -1.88
KNTC1-213ENST00000542727 KCTD5Q9NXV2 234 aa3.32□□□□□ -1.88
KNTC1-213ENST00000542727 FOXJ2Q9P0K8 574 aa3.32□□□□□ -1.88
KNTC1-213ENST00000542727 DPP7Q9UHL4 492 aa3.32□□□□□ -1.88
KNTC1-213ENST00000542727 SCOCQ9UIL1 159 aa3.32□□□□□ -1.88
KNTC1-213ENST00000542727 ZBTB21Q9ULJ3 1066 aa3.32□□□□□ -1.88
KNTC1-213ENST00000542727 PNPLA7Q6ZV29 1317 aa3.32□□□□□ -1.88
KNTC1-213ENST00000542727 SETD1BQ9UPS6 1966 aaKnown RBP3.31□□□□□ -1.88
KNTC1-213ENST00000542727 PDE8AO60658 829 aa3.31□□□□□ -1.88
KNTC1-213ENST00000542727 RAP2AP10114 183 aa3.31□□□□□ -1.88
KNTC1-213ENST00000542727 MYCLP1P12525 358 aaPredicted RBP3.31□□□□□ -1.88
KNTC1-213ENST00000542727 ITGB6P18564 788 aa3.31□□□□□ -1.88
KNTC1-213ENST00000542727 CANXP27824 592 aaKnown RBP3.31□□□□□ -1.88
KNTC1-213ENST00000542727 ADSLP30566 484 aaPredicted RBP3.31□□□□□ -1.88
KNTC1-213ENST00000542727 PTH2RP49190 550 aa3.31□□□□□ -1.88
KNTC1-213ENST00000542727 VAV2P52735 878 aa3.31□□□□□ -1.88
KNTC1-213ENST00000542727 UBXN2BQ14CS0 331 aa3.31□□□□□ -1.88
KNTC1-213ENST00000542727 CYP2A13Q16696 494 aa3.31□□□□□ -1.88
KNTC1-213ENST00000542727 ATP2B3Q16720 1220 aa3.31□□□□□ -1.88
KNTC1-213ENST00000542727 MUM1Q2TAK8 710 aa3.31□□□□□ -1.88
KNTC1-213ENST00000542727 KIAA1614Q5VZ46 1190 aa3.31□□□□□ -1.88
KNTC1-213ENST00000542727 Q6ZVL8 140 aa3.31□□□□□ -1.88
KNTC1-213ENST00000542727 SEM1Q6ZVN7 128 aa3.31□□□□□ -1.88
KNTC1-213ENST00000542727 PTF1AQ7RTS3 328 aa3.31□□□□□ -1.88
KNTC1-213ENST00000542727 GRASPQ7Z6J2 395 aaPredicted RBP3.31□□□□□ -1.88
KNTC1-213ENST00000542727 PQLC1Q8N2U9 271 aa3.31□□□□□ -1.88
KNTC1-213ENST00000542727 CLRN3Q8NCR9 226 aa3.31□□□□□ -1.88
KNTC1-213ENST00000542727 REPS2Q8NFH8 660 aa3.31□□□□□ -1.88
KNTC1-213ENST00000542727 ZNF384Q8TF68 577 aa3.31□□□□□ -1.88
KNTC1-213ENST00000542727 LEO1Q8WVC0 666 aaPredicted RBP3.31□□□□□ -1.88
KNTC1-213ENST00000542727 SMG7Q92540 1137 aaKnown RBP3.31□□□□□ -1.88
KNTC1-213ENST00000542727 CYFIP2Q96F07 1278 aa3.31□□□□□ -1.88
KNTC1-213ENST00000542727 PNKPQ96T60 521 aa3.31□□□□□ -1.88
KNTC1-213ENST00000542727 AIFM2Q9BRQ8 373 aa3.31□□□□□ -1.88
KNTC1-213ENST00000542727 SENP6Q9GZR1 1112 aaPredicted RBP3.31□□□□□ -1.88
KNTC1-213ENST00000542727 SLKQ9H2G2 1235 aaPredicted RBP3.31□□□□□ -1.88
KNTC1-213ENST00000542727 TOPORSQ9NS56 1045 aaPredicted RBP3.31□□□□□ -1.88
KNTC1-213ENST00000542727 A0A087X0B3 334 aa3.3□□□□□ -1.88
KNTC1-213ENST00000542727 ENPP3O14638 875 aa3.3□□□□□ -1.88
KNTC1-213ENST00000542727 MATN4O95460 622 aa3.3□□□□□ -1.88
KNTC1-213ENST00000542727 CKBP12277 381 aa3.3□□□□□ -1.88
KNTC1-213ENST00000542727 HSD3B2P26439 372 aa3.3□□□□□ -1.88
KNTC1-213ENST00000542727 SOX10P56693 466 aa3.3□□□□□ -1.88
KNTC1-213ENST00000542727 HSD11B2P80365 405 aa3.3□□□□□ -1.88
KNTC1-213ENST00000542727 CDK17Q00537 523 aa3.3□□□□□ -1.88
KNTC1-213ENST00000542727 NBPF8Q3BBV2 869 aa3.3□□□□□ -1.88
KNTC1-213ENST00000542727 ARHGEF25Q86VW2 580 aa3.3□□□□□ -1.88
KNTC1-213ENST00000542727 UBR7Q8N806 425 aa3.3□□□□□ -1.88
KNTC1-213ENST00000542727 TSPEARQ8WU66 669 aa3.3□□□□□ -1.88
KNTC1-213ENST00000542727 NUP133Q8WUM0 1156 aa3.3□□□□□ -1.88
KNTC1-213ENST00000542727 HOXB13Q92826 284 aaPredicted RBP3.3□□□□□ -1.88
KNTC1-213ENST00000542727 PTCD3Q96EY7 689 aaKnown RBP3.3□□□□□ -1.88
KNTC1-213ENST00000542727 UROC1Q96N76 676 aa3.3□□□□□ -1.88
KNTC1-213ENST00000542727 ORAI2Q96SN7 254 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms