RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 C2CD2LO14523 706 aa10.62□□□□□ -0.71
YBX3-212ENST00000542002 OGTO15294 1046 aa10.62□□□□□ -0.71
YBX3-212ENST00000542002 NCK2O43639 380 aa10.62□□□□□ -0.71
YBX3-212ENST00000542002 TADA2AO75478 443 aa10.62□□□□□ -0.71
YBX3-212ENST00000542002 SOD2P04179 222 aa10.62□□□□□ -0.71
YBX3-212ENST00000542002 CLTAP09496 248 aa10.62□□□□□ -0.71
YBX3-212ENST00000542002 CNPP09543 421 aaKnown RBP10.62□□□□□ -0.71
YBX3-212ENST00000542002 SCP2P22307 547 aa10.62□□□□□ -0.71
YBX3-212ENST00000542002 MATR3P43243 847 aaKnown RBP eCLIP10.62□□□□□ -0.71
YBX3-212ENST00000542002 ACOT2P49753 483 aa10.62□□□□□ -0.71
YBX3-212ENST00000542002 YARSP54577 528 aaKnown RBP10.62□□□□□ -0.71
YBX3-212ENST00000542002 WNT7BP56706 349 aa10.62□□□□□ -0.71
YBX3-212ENST00000542002 ASIC1P78348 528 aa10.62□□□□□ -0.71
YBX3-212ENST00000542002 AMPD3Q01432 767 aa10.62□□□□□ -0.71
YBX3-212ENST00000542002 ZBTB6Q15916 424 aa10.62□□□□□ -0.71
YBX3-212ENST00000542002 TJAP1Q5JTD0 557 aa10.62□□□□□ -0.71
YBX3-212ENST00000542002 SCARA3Q6AZY7 606 aa10.62□□□□□ -0.71
YBX3-212ENST00000542002 KANK3Q6NY19 840 aa10.62□□□□□ -0.71
YBX3-212ENST00000542002 LLGL2Q6P1M3 1020 aa10.62□□□□□ -0.71
YBX3-212ENST00000542002 TMEM184AQ6ZMB5 413 aa10.62□□□□□ -0.71
YBX3-212ENST00000542002 APBB1IPQ7Z5R6 666 aaPredicted RBP10.62□□□□□ -0.71
YBX3-212ENST00000542002 CCDC65Q8IXS2 484 aa10.62□□□□□ -0.71
YBX3-212ENST00000542002 FSIP1Q8NA03 581 aa10.62□□□□□ -0.71
YBX3-212ENST00000542002 SLC22A17Q8WUG5 538 aa10.62□□□□□ -0.71
YBX3-212ENST00000542002 KLHL5Q96PQ7 755 aa10.62□□□□□ -0.71
YBX3-212ENST00000542002 ACCSQ96QU6 501 aa10.62□□□□□ -0.71
YBX3-212ENST00000542002 MSTO1Q9BUK6 570 aa10.62□□□□□ -0.71
YBX3-212ENST00000542002 LRRC27Q9C0I9 530 aa10.62□□□□□ -0.71
YBX3-212ENST00000542002 TUBGCP4Q9UGJ1 667 aa10.62□□□□□ -0.71
YBX3-212ENST00000542002 CPSF3Q9UKF6 684 aaKnown RBP10.62□□□□□ -0.71
YBX3-212ENST00000542002 ADAM28Q9UKQ2 775 aa10.62□□□□□ -0.71
YBX3-212ENST00000542002 PCDHB13Q9Y5F0 798 aa10.62□□□□□ -0.71
YBX3-212ENST00000542002 GRXCR2A6NFK2 248 aa10.61□□□□□ -0.71
YBX3-212ENST00000542002 I3L4J1 428 aa10.61□□□□□ -0.71
YBX3-212ENST00000542002 TGFB1I1O43294 461 aa10.61□□□□□ -0.71
YBX3-212ENST00000542002 NR1I2O75469 434 aa10.61□□□□□ -0.71
YBX3-212ENST00000542002 ZNF202O95125 648 aa10.61□□□□□ -0.71
YBX3-212ENST00000542002 PRR29P0C7W0 189 aa10.61□□□□□ -0.71
YBX3-212ENST00000542002 SYKP43405 635 aa10.61□□□□□ -0.71
YBX3-212ENST00000542002 GUCY2FP51841 1108 aa10.61□□□□□ -0.71
YBX3-212ENST00000542002 DSG1Q02413 1049 aa10.61□□□□□ -0.71
YBX3-212ENST00000542002 SNW1Q13573 536 aaKnown RBP10.61□□□□□ -0.71
YBX3-212ENST00000542002 RTP2Q5QGT7 225 aa10.61□□□□□ -0.71
YBX3-212ENST00000542002 FUT10Q6P4F1 479 aa10.61□□□□□ -0.71
YBX3-212ENST00000542002 SYCE2Q6PIF2 218 aa10.61□□□□□ -0.71
YBX3-212ENST00000542002 DCLRE1AQ6PJP8 1040 aa10.61□□□□□ -0.71
YBX3-212ENST00000542002 UNC13DQ70J99 1090 aa10.61□□□□□ -0.71
YBX3-212ENST00000542002 ZNF507Q8TCN5 953 aa10.61□□□□□ -0.71
YBX3-212ENST00000542002 SCFD1Q8WVM8 642 aa10.61□□□□□ -0.71
YBX3-212ENST00000542002 HVCN1Q96D96 273 aa10.61□□□□□ -0.71
YBX3-212ENST00000542002 CBWD1Q9BRT8 395 aa10.61□□□□□ -0.71
YBX3-212ENST00000542002 HERC2P3Q9BVR0 1158 aa10.61□□□□□ -0.71
YBX3-212ENST00000542002 S1PR5Q9H228 398 aa10.61□□□□□ -0.71
YBX3-212ENST00000542002 PLEKHA5Q9HAU0 1116 aa10.61□□□□□ -0.71
YBX3-212ENST00000542002 MAGEF1Q9HAY2 307 aa10.61□□□□□ -0.71
YBX3-212ENST00000542002 SLC39A2Q9NP94 309 aa10.61□□□□□ -0.71
YBX3-212ENST00000542002 TOPORSQ9NS56 1045 aaPredicted RBP10.61□□□□□ -0.71
YBX3-212ENST00000542002 CDH22Q9UJ99 828 aa10.61□□□□□ -0.71
YBX3-212ENST00000542002 AGO2Q9UKV8 859 aaKnown RBP10.61□□□□□ -0.71
YBX3-212ENST00000542002 HCFC2Q9Y5Z7 792 aa10.61□□□□□ -0.71
YBX3-212ENST00000542002 C5orf42Q9H799 3197 aa10.6□□□□□ -0.71
YBX3-212ENST00000542002 PVALEFA0A1B0GWK0 134 aa10.6□□□□□ -0.71
YBX3-212ENST00000542002 CARNS1A5YM72 827 aa10.6□□□□□ -0.71
YBX3-212ENST00000542002 TEX28O15482 410 aa10.6□□□□□ -0.71
YBX3-212ENST00000542002 B3GAT3O94766 335 aa10.6□□□□□ -0.71
YBX3-212ENST00000542002 IL9P15248 144 aa10.6□□□□□ -0.71
YBX3-212ENST00000542002 EPCAMP16422 314 aa10.6□□□□□ -0.71
YBX3-212ENST00000542002 RPL17P18621 184 aaKnown RBP10.6□□□□□ -0.71
YBX3-212ENST00000542002 CA8P35219 290 aa10.6□□□□□ -0.71
YBX3-212ENST00000542002 BRCC3P46736 316 aa10.6□□□□□ -0.71
YBX3-212ENST00000542002 NDUFV1P49821 464 aa10.6□□□□□ -0.71
YBX3-212ENST00000542002 STK4Q13043 487 aa10.6□□□□□ -0.71
YBX3-212ENST00000542002 KMT5BQ4FZB7 885 aa10.6□□□□□ -0.71
YBX3-212ENST00000542002 FAM171A1Q5VUB5 890 aa10.6□□□□□ -0.71
YBX3-212ENST00000542002 SLFN12LQ6IEE8 588 aa10.6□□□□□ -0.71
YBX3-212ENST00000542002 PTCRAQ6ISU1 281 aaPredicted RBP10.6□□□□□ -0.71
YBX3-212ENST00000542002 PRSS55Q6UWB4 352 aaPredicted RBP10.6□□□□□ -0.71
YBX3-212ENST00000542002 CEP57L1Q8IYX8 460 aa10.6□□□□□ -0.71
YBX3-212ENST00000542002 FMR1NBQ8N0W7 255 aaPredicted RBP10.6□□□□□ -0.71
YBX3-212ENST00000542002 C12orf76Q8N812 135 aaPredicted RBP10.6□□□□□ -0.71
YBX3-212ENST00000542002 ENGASEQ8NFI3 743 aa10.6□□□□□ -0.71
YBX3-212ENST00000542002 LNX1Q8TBB1 728 aaPredicted RBP10.6□□□□□ -0.71
YBX3-212ENST00000542002 ADAMTS19Q8TE59 1207 aa10.6□□□□□ -0.71
YBX3-212ENST00000542002 POMGNT1Q8WZA1 660 aa10.6□□□□□ -0.71
YBX3-212ENST00000542002 SAAL1Q96ER3 474 aa10.6□□□□□ -0.71
YBX3-212ENST00000542002 FAM84AQ96KN4 292 aa10.6□□□□□ -0.71
YBX3-212ENST00000542002 CDCA3Q99618 268 aaPredicted RBP10.6□□□□□ -0.71
YBX3-212ENST00000542002 PCIF1Q9H4Z3 704 aa10.6□□□□□ -0.71
YBX3-212ENST00000542002 RPF1Q9H9Y2 349 aaKnown RBP10.6□□□□□ -0.71
YBX3-212ENST00000542002 RXFP1Q9HBX9 757 aa10.6□□□□□ -0.71
YBX3-212ENST00000542002 CD320Q9NPF0 282 aa10.6□□□□□ -0.71
YBX3-212ENST00000542002 MRPL17Q9NRX2 175 aaKnown RBP10.6□□□□□ -0.71
YBX3-212ENST00000542002 GOLGA8IPA6NC78 632 aa10.59□□□□□ -0.71
YBX3-212ENST00000542002 GOLGA8JA6NMD2 632 aa10.59□□□□□ -0.71
YBX3-212ENST00000542002 TMEM189-UBE2V1I3L0A0 370 aa10.59□□□□□ -0.71
YBX3-212ENST00000542002 DLL1O00548 723 aa10.59□□□□□ -0.71
YBX3-212ENST00000542002 PODXLO00592 558 aa10.59□□□□□ -0.71
YBX3-212ENST00000542002 PPEF2O14830 753 aa10.59□□□□□ -0.71
YBX3-212ENST00000542002 ADAM12O43184 909 aa10.59□□□□□ -0.71
YBX3-212ENST00000542002 MBTPS2O43462 519 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms