RNA–Protein interactions for RNA: ENST00000541416.5

SNHG1-216, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 996 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-216ENST00000541416 PRRG1O14668 218 aa13.51□□□□□ -0.25
SNHG1-216ENST00000541416 PTGESO14684 152 aa13.51□□□□□ -0.25
SNHG1-216ENST00000541416 ZNF197O14709 1029 aa13.51□□□□□ -0.25
SNHG1-216ENST00000541416 PFKFB2O60825 505 aa13.51□□□□□ -0.25
SNHG1-216ENST00000541416 PRKCBP05771 671 aa13.51□□□□□ -0.25
SNHG1-216ENST00000541416 PTPN2P17706 415 aa13.51□□□□□ -0.25
SNHG1-216ENST00000541416 FGFR3P22607 806 aa13.51□□□□□ -0.25
SNHG1-216ENST00000541416 NAMPTP43490 491 aa13.51□□□□□ -0.25
SNHG1-216ENST00000541416 EFNA5P52803 228 aa13.51□□□□□ -0.25
SNHG1-216ENST00000541416 NR5A1Q13285 461 aa13.51□□□□□ -0.25
SNHG1-216ENST00000541416 NOSTRINQ8IVI9 506 aa13.51□□□□□ -0.25
SNHG1-216ENST00000541416 ERMNQ8TAM6 284 aa13.51□□□□□ -0.25
SNHG1-216ENST00000541416 DNASE1L2Q92874 299 aa13.51□□□□□ -0.25
SNHG1-216ENST00000541416 ELSPBP1Q96BH3 223 aa13.51□□□□□ -0.25
SNHG1-216ENST00000541416 IFT74Q96LB3 600 aa13.51□□□□□ -0.25
SNHG1-216ENST00000541416 AVENQ9NQS1 362 aaPredicted RBP13.51□□□□□ -0.25
SNHG1-216ENST00000541416 DNMT3BQ9UBC3 853 aaKnown RBP13.51□□□□□ -0.25
SNHG1-216ENST00000541416 USP18Q9UMW8 372 aa13.51□□□□□ -0.25
SNHG1-216ENST00000541416 CDY1Q9Y6F8 540 aa13.51□□□□□ -0.25
SNHG1-216ENST00000541416 DOCK6Q96HP0 2047 aa13.51□□□□□ -0.25
SNHG1-216ENST00000541416 ARHGEF35A5YM69 484 aa13.5□□□□□ -0.25
SNHG1-216ENST00000541416 ADAM12O43184 909 aa13.5□□□□□ -0.25
SNHG1-216ENST00000541416 RHOP08100 348 aa13.5□□□□□ -0.25
SNHG1-216ENST00000541416 LIG1P18858 919 aa13.5□□□□□ -0.25
SNHG1-216ENST00000541416 CD72P21854 359 aa13.5□□□□□ -0.25
SNHG1-216ENST00000541416 YARSP54577 528 aaKnown RBP13.5□□□□□ -0.25
SNHG1-216ENST00000541416 ELMOD1Q8N336 334 aa13.5□□□□□ -0.25
SNHG1-216ENST00000541416 ING5Q8WYH8 240 aa13.5□□□□□ -0.25
SNHG1-216ENST00000541416 MCRS1Q96EZ8 462 aa13.5□□□□□ -0.25
SNHG1-216ENST00000541416 RTKNQ9BST9 563 aa13.5□□□□□ -0.25
SNHG1-216ENST00000541416 BRD9Q9H8M2 597 aa13.5□□□□□ -0.25
SNHG1-216ENST00000541416 GPRC5CQ9NQ84 441 aa13.5□□□□□ -0.25
SNHG1-216ENST00000541416 TOPORSQ9NS56 1045 aaPredicted RBP13.5□□□□□ -0.25
SNHG1-216ENST00000541416 GJB4Q9NTQ9 266 aa13.5□□□□□ -0.25
SNHG1-216ENST00000541416 SLC38A7Q9NVC3 462 aa13.5□□□□□ -0.25
SNHG1-216ENST00000541416 HCFC1R1Q9NWW0 138 aa13.5□□□□□ -0.25
SNHG1-216ENST00000541416 GDAQ9Y2T3 454 aa13.5□□□□□ -0.25
SNHG1-216ENST00000541416 MTF2Q9Y483 593 aaPredicted RBP13.5□□□□□ -0.25
SNHG1-216ENST00000541416 LILRB5O75023 590 aa13.49□□□□□ -0.25
SNHG1-216ENST00000541416 TARSP26639 723 aaKnown RBP13.49□□□□□ -0.25
SNHG1-216ENST00000541416 EARS2Q5JPH6 523 aaKnown RBP13.49□□□□□ -0.25
SNHG1-216ENST00000541416 ZNF461Q8TAF7 563 aa13.49□□□□□ -0.25
SNHG1-216ENST00000541416 NELL1Q92832 810 aa13.49□□□□□ -0.25
SNHG1-216ENST00000541416 IRF7Q92985 503 aa13.49□□□□□ -0.25
SNHG1-216ENST00000541416 DDX27Q96GQ7 796 aaKnown RBP13.49□□□□□ -0.25
SNHG1-216ENST00000541416 TRMT61BQ9BVS5 477 aaKnown RBP13.49□□□□□ -0.25
SNHG1-216ENST00000541416 ZFP14Q9HCL3 533 aa13.49□□□□□ -0.25
SNHG1-216ENST00000541416 PRMT8Q9NR22 394 aaPredicted RBP13.49□□□□□ -0.25
SNHG1-216ENST00000541416 HEBP1Q9NRV9 189 aa13.49□□□□□ -0.25
SNHG1-216ENST00000541416 CEP250Q9BV73 2442 aa13.49□□□□□ -0.25
SNHG1-216ENST00000541416 PHLPP2Q6ZVD8 1323 aa13.48□□□□□ -0.25
SNHG1-216ENST00000541416 ARHGEF37A1IGU5 675 aa13.48□□□□□ -0.25
SNHG1-216ENST00000541416 FAM205CA6NFA0 338 aa13.48□□□□□ -0.25
SNHG1-216ENST00000541416 H7C4K7 107 aa13.48□□□□□ -0.25
SNHG1-216ENST00000541416 MICAL2O94851 1124 aa13.48□□□□□ -0.25
SNHG1-216ENST00000541416 CYP11B2P19099 503 aa13.48□□□□□ -0.25
SNHG1-216ENST00000541416 CLCNKBP51801 687 aa13.48□□□□□ -0.25
SNHG1-216ENST00000541416 ATXN1P54253 815 aaKnown RBP13.48□□□□□ -0.25
SNHG1-216ENST00000541416 SAFBQ15424 915 aaKnown RBP eCLIP13.48□□□□□ -0.25
SNHG1-216ENST00000541416 NAB2Q15742 525 aa13.48□□□□□ -0.25
SNHG1-216ENST00000541416 UPP1Q16831 310 aa13.48□□□□□ -0.25
SNHG1-216ENST00000541416 CYP4A22Q5TCH4 519 aa13.48□□□□□ -0.25
SNHG1-216ENST00000541416 ATF7IP2Q5U623 682 aa13.48□□□□□ -0.25
SNHG1-216ENST00000541416 HAUS3Q68CZ6 603 aa13.48□□□□□ -0.25
SNHG1-216ENST00000541416 IQCEQ6IPM2 695 aa13.48□□□□□ -0.25
SNHG1-216ENST00000541416 PADI6Q6TGC4 694 aa13.48□□□□□ -0.25
SNHG1-216ENST00000541416 PDZD4Q76G19 769 aaPredicted RBP13.48□□□□□ -0.25
SNHG1-216ENST00000541416 CATSPER3Q86XQ3 398 aa13.48□□□□□ -0.25
SNHG1-216ENST00000541416 CELF5Q8N6W0 485 aaKnown RBP13.48□□□□□ -0.25
SNHG1-216ENST00000541416 KIFAP3Q92845 792 aa13.48□□□□□ -0.25
SNHG1-216ENST00000541416 TNFRSF25Q93038 417 aa13.48□□□□□ -0.25
SNHG1-216ENST00000541416 PPP1R10Q96QC0 940 aaKnown RBP13.48□□□□□ -0.25
SNHG1-216ENST00000541416 MTMR9Q96QG7 549 aa13.48□□□□□ -0.25
SNHG1-216ENST00000541416 POLR3CQ9BUI4 534 aaPredicted RBP13.48□□□□□ -0.25
SNHG1-216ENST00000541416 TPCN1Q9ULQ1 816 aa13.48□□□□□ -0.25
SNHG1-216ENST00000541416 VWA8A3KMH1 1905 aa13.47□□□□□ -0.25
SNHG1-216ENST00000541416 SPATA31C1P0DKV0 1188 aa13.47□□□□□ -0.25
SNHG1-216ENST00000541416 ATF2P15336 505 aa13.47□□□□□ -0.25
SNHG1-216ENST00000541416 MUTP22033 750 aa13.47□□□□□ -0.25
SNHG1-216ENST00000541416 RPA1P27694 616 aa13.47□□□□□ -0.25
SNHG1-216ENST00000541416 TKTP29401 623 aaKnown RBP13.47□□□□□ -0.25
SNHG1-216ENST00000541416 CCR3P51677 355 aa13.47□□□□□ -0.25
SNHG1-216ENST00000541416 MTAPQ13126 283 aa13.47□□□□□ -0.25
SNHG1-216ENST00000541416 GLRA4Q5JXX5 417 aa13.47□□□□□ -0.25
SNHG1-216ENST00000541416 TPGS2Q68CL5 300 aa13.47□□□□□ -0.25
SNHG1-216ENST00000541416 TANGO2Q6ICL3 276 aa13.47□□□□□ -0.25
SNHG1-216ENST00000541416 SLC8B1Q6J4K2 584 aa13.47□□□□□ -0.25
SNHG1-216ENST00000541416 C1orf228Q6PIY5 440 aa13.47□□□□□ -0.25
SNHG1-216ENST00000541416 MAMSTRQ6ZN01 415 aa13.47□□□□□ -0.25
SNHG1-216ENST00000541416 DIS3L2Q8IYB7 885 aaKnown RBP13.47□□□□□ -0.25
SNHG1-216ENST00000541416 LEMD2Q8NC56 503 aa13.47□□□□□ -0.25
SNHG1-216ENST00000541416 DEPDC1BQ8WUY9 529 aa13.47□□□□□ -0.25
SNHG1-216ENST00000541416 CORO1BQ9BR76 489 aa13.47□□□□□ -0.25
SNHG1-216ENST00000541416 CCDC94Q9BW85 323 aaPredicted RBP13.47□□□□□ -0.25
SNHG1-216ENST00000541416 CCDC113Q9H0I3 377 aa13.47□□□□□ -0.25
SNHG1-216ENST00000541416 CHRDQ9H2X0 955 aa13.47□□□□□ -0.25
SNHG1-216ENST00000541416 MAFFQ9ULX9 164 aa13.47□□□□□ -0.25
SNHG1-216ENST00000541416 NDRG2Q9UN36 371 aaKnown RBP13.47□□□□□ -0.25
SNHG1-216ENST00000541416 NUB1Q9Y5A7 615 aa13.47□□□□□ -0.25
SNHG1-216ENST00000541416 A0A087WWV3 80 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms