RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 TRAPPC3O43617 180 aa10.56□□□□□ -0.72
YBX3-211ENST00000541351 OPHN1O60890 802 aa10.56□□□□□ -0.72
YBX3-211ENST00000541351 HOXD12P35452 270 aa10.56□□□□□ -0.72
YBX3-211ENST00000541351 MAPK8P45983 427 aa10.56□□□□□ -0.72
YBX3-211ENST00000541351 JAK3P52333 1124 aa10.56□□□□□ -0.72
YBX3-211ENST00000541351 IRX4P78413 519 aa10.56□□□□□ -0.72
YBX3-211ENST00000541351 FCHO2Q0JRZ9 810 aa10.56□□□□□ -0.72
YBX3-211ENST00000541351 SEMA3BQ13214 749 aa10.56□□□□□ -0.72
YBX3-211ENST00000541351 FBXO43Q4G163 708 aa10.56□□□□□ -0.72
YBX3-211ENST00000541351 XKR3Q5GH77 459 aa10.56□□□□□ -0.72
YBX3-211ENST00000541351 PRSS36Q5K4E3 855 aa10.56□□□□□ -0.72
YBX3-211ENST00000541351 PPP1R18Q6NYC8 613 aa10.56□□□□□ -0.72
YBX3-211ENST00000541351 HEATR3Q7Z4Q2 680 aa10.56□□□□□ -0.72
YBX3-211ENST00000541351 ZSCAN18Q8TBC5 510 aaPredicted RBP10.56□□□□□ -0.72
YBX3-211ENST00000541351 ZNF512Q96ME7 567 aaPredicted RBP10.56□□□□□ -0.72
YBX3-211ENST00000541351 DISC1Q9NRI5 854 aa10.56□□□□□ -0.72
YBX3-211ENST00000541351 STK24Q9Y6E0 443 aa10.56□□□□□ -0.72
YBX3-211ENST00000541351 URB1O60287 2271 aaKnown RBP10.56□□□□□ -0.72
YBX3-211ENST00000541351 TICRRQ7Z2Z1 1910 aa10.56□□□□□ -0.72
YBX3-211ENST00000541351 APC2O95996 2303 aa10.55□□□□□ -0.72
YBX3-211ENST00000541351 IGKV6-21A0A0C4DH24 114 aa10.55□□□□□ -0.72
YBX3-211ENST00000541351 hCG_1984214I3L0E3 225 aa10.55□□□□□ -0.72
YBX3-211ENST00000541351 C1QL1O75973 258 aa10.55□□□□□ -0.72
YBX3-211ENST00000541351 CALM1P0DP23 149 aa10.55□□□□□ -0.72
YBX3-211ENST00000541351 CALM2P0DP24 149 aa10.55□□□□□ -0.72
YBX3-211ENST00000541351 CALM3P0DP25 149 aa10.55□□□□□ -0.72
YBX3-211ENST00000541351 DHPSP49366 369 aaPredicted RBP10.55□□□□□ -0.72
YBX3-211ENST00000541351 TUSC3Q13454 348 aa10.55□□□□□ -0.72
YBX3-211ENST00000541351 MTERF2Q49AM1 385 aa10.55□□□□□ -0.72
YBX3-211ENST00000541351 ANKS3Q6ZW76 656 aa10.55□□□□□ -0.72
YBX3-211ENST00000541351 ZNF713Q8N859 430 aaPredicted RBP10.55□□□□□ -0.72
YBX3-211ENST00000541351 CEP76Q8TAP6 659 aa10.55□□□□□ -0.72
YBX3-211ENST00000541351 MDM1Q8TC05 714 aa10.55□□□□□ -0.72
YBX3-211ENST00000541351 PIGKQ92643 395 aa10.55□□□□□ -0.72
YBX3-211ENST00000541351 RIC8AQ9NPQ8 531 aa10.55□□□□□ -0.72
YBX3-211ENST00000541351 ASAH2Q9NR71 780 aa10.55□□□□□ -0.72
YBX3-211ENST00000541351 THG1LQ9NWX6 298 aaKnown RBP10.55□□□□□ -0.72
YBX3-211ENST00000541351 MTRRQ9UBK8 725 aa10.55□□□□□ -0.72
YBX3-211ENST00000541351 COL4A3BPQ9Y5P4 624 aa10.55□□□□□ -0.72
YBX3-211ENST00000541351 F8W810 466 aa10.54□□□□□ -0.72
YBX3-211ENST00000541351 MEFVO15553 781 aaPredicted RBP10.54□□□□□ -0.72
YBX3-211ENST00000541351 MAFO75444 373 aaPredicted RBP10.54□□□□□ -0.72
YBX3-211ENST00000541351 ENGP17813 658 aa10.54□□□□□ -0.72
YBX3-211ENST00000541351 VIPR2P41587 438 aa10.54□□□□□ -0.72
YBX3-211ENST00000541351 ADCY7P51828 1080 aa10.54□□□□□ -0.72
YBX3-211ENST00000541351 DGKEP52429 567 aa10.54□□□□□ -0.72
YBX3-211ENST00000541351 NAPAP54920 295 aa10.54□□□□□ -0.72
YBX3-211ENST00000541351 GFPT1Q06210 699 aaPredicted RBP10.54□□□□□ -0.72
YBX3-211ENST00000541351 TARBP2Q15633 366 aaKnown RBP10.54□□□□□ -0.72
YBX3-211ENST00000541351 LRRC69Q6ZNQ3 347 aa10.54□□□□□ -0.72
YBX3-211ENST00000541351 CYB5R4Q7L1T6 521 aa10.54□□□□□ -0.72
YBX3-211ENST00000541351 TMTC2Q8N394 836 aa10.54□□□□□ -0.72
YBX3-211ENST00000541351 ZNF843Q8N446 348 aa10.54□□□□□ -0.72
YBX3-211ENST00000541351 SMG8Q8ND04 991 aaKnown RBP10.54□□□□□ -0.72
YBX3-211ENST00000541351 RDM1Q8NG50 284 aa10.54□□□□□ -0.72
YBX3-211ENST00000541351 ZNF461Q8TAF7 563 aa10.54□□□□□ -0.72
YBX3-211ENST00000541351 PSPC1Q8WXF1 523 aaKnown RBP10.54□□□□□ -0.72
YBX3-211ENST00000541351 SLC7A3Q8WY07 619 aa10.54□□□□□ -0.72
YBX3-211ENST00000541351 ZFP42Q96MM3 310 aa10.54□□□□□ -0.72
YBX3-211ENST00000541351 NIFKQ9BYG3 293 aaKnown RBP10.54□□□□□ -0.72
YBX3-211ENST00000541351 DIAPH3Q9NSV4 1193 aa10.54□□□□□ -0.72
YBX3-211ENST00000541351 C2orf42Q9NWW7 574 aa10.54□□□□□ -0.72
YBX3-211ENST00000541351 OBP2AQ9NY56 170 aa10.54□□□□□ -0.72
YBX3-211ENST00000541351 MAFFQ9ULX9 164 aa10.54□□□□□ -0.72
YBX3-211ENST00000541351 PPME1Q9Y570 386 aa10.54□□□□□ -0.72
YBX3-211ENST00000541351 BACE2Q9Y5Z0 518 aa10.54□□□□□ -0.72
YBX3-211ENST00000541351 CDY1Q9Y6F8 540 aa10.54□□□□□ -0.72
YBX3-211ENST00000541351 U3KPZ7 1027 aaPredicted RBP10.54□□□□□ -0.72
YBX3-211ENST00000541351 ZNF462Q96JM2 2506 aa10.54□□□□□ -0.72
YBX3-211ENST00000541351 ASCC3Q8N3C0 2202 aaKnown RBP10.54□□□□□ -0.72
YBX3-211ENST00000541351 CACNA1EQ15878 2313 aa10.53□□□□□ -0.72
YBX3-211ENST00000541351 COL4A2P08572 1712 aa10.53□□□□□ -0.72
YBX3-211ENST00000541351 HECTD1Q9ULT8 2610 aa10.53□□□□□ -0.72
YBX3-211ENST00000541351 ASAP2O43150 1006 aa10.53□□□□□ -0.72
YBX3-211ENST00000541351 CYP3A4P08684 503 aa10.53□□□□□ -0.72
YBX3-211ENST00000541351 DRD1P21728 446 aa10.53□□□□□ -0.72
YBX3-211ENST00000541351 HOXA11P31270 313 aaPredicted RBP10.53□□□□□ -0.72
YBX3-211ENST00000541351 SOX9P48436 509 aa10.53□□□□□ -0.72
YBX3-211ENST00000541351 SLC14A1Q13336 389 aa10.53□□□□□ -0.72
YBX3-211ENST00000541351 DRP2Q13474 957 aa10.53□□□□□ -0.72
YBX3-211ENST00000541351 TRIP6Q15654 476 aaKnown RBP10.53□□□□□ -0.72
YBX3-211ENST00000541351 ITPRIPL2Q3MIP1 535 aa10.53□□□□□ -0.72
YBX3-211ENST00000541351 SPDYCQ5MJ68 293 aa10.53□□□□□ -0.72
YBX3-211ENST00000541351 UBXN11Q5T124 520 aa10.53□□□□□ -0.72
YBX3-211ENST00000541351 SLC23A3Q6PIS1 610 aa10.53□□□□□ -0.72
YBX3-211ENST00000541351 TXNDC11Q6PKC3 985 aa10.53□□□□□ -0.72
YBX3-211ENST00000541351 LPCAT2Q7L5N7 544 aa10.53□□□□□ -0.72
YBX3-211ENST00000541351 SYT13Q7L8C5 426 aa10.53□□□□□ -0.72
YBX3-211ENST00000541351 SYT12Q8IV01 421 aa10.53□□□□□ -0.72
YBX3-211ENST00000541351 ZNF654Q8IZM8 581 aa10.53□□□□□ -0.72
YBX3-211ENST00000541351 NCOA7Q8NI08 942 aa10.53□□□□□ -0.72
YBX3-211ENST00000541351 OTUD7AQ8TE49 926 aaPredicted RBP10.53□□□□□ -0.72
YBX3-211ENST00000541351 RILPL2Q969X0 211 aa10.53□□□□□ -0.72
YBX3-211ENST00000541351 SPACA7Q96KW9 195 aa10.53□□□□□ -0.72
YBX3-211ENST00000541351 HHIPQ96QV1 700 aa10.53□□□□□ -0.72
YBX3-211ENST00000541351 CSRNP2Q9H175 543 aa10.53□□□□□ -0.72
YBX3-211ENST00000541351 IFT122Q9HBG6 1241 aa10.53□□□□□ -0.72
YBX3-211ENST00000541351 DAXXQ9UER7 740 aaPredicted RBP10.53□□□□□ -0.72
YBX3-211ENST00000541351 SALL3Q9BXA9 1300 aa10.53□□□□□ -0.72
YBX3-211ENST00000541351 LAMA1P25391 3075 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms