RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 COL4A6Q14031 1691 aa16.82■□□□□ 0.28
DDB1-218ENST00000540784 RFXAPO00287 272 aa16.82■□□□□ 0.28
DDB1-218ENST00000540784 B4GALT3O60512 393 aa16.82■□□□□ 0.28
DDB1-218ENST00000540784 FGF18O76093 207 aa16.82■□□□□ 0.28
DDB1-218ENST00000540784 NR2F2P24468 414 aa16.82■□□□□ 0.28
DDB1-218ENST00000540784 CCNE1P24864 410 aa16.82■□□□□ 0.28
DDB1-218ENST00000540784 PPM1AP35813 382 aa16.82■□□□□ 0.28
DDB1-218ENST00000540784 NLRP12P59046 1061 aa16.82■□□□□ 0.28
DDB1-218ENST00000540784 NAB2Q15742 525 aa16.82■□□□□ 0.28
DDB1-218ENST00000540784 ZBTB6Q15916 424 aa16.82■□□□□ 0.28
DDB1-218ENST00000540784 SKOR2Q2VWA4 1001 aaPredicted RBP16.82■□□□□ 0.28
DDB1-218ENST00000540784 EDRF1Q3B7T1 1238 aa16.82■□□□□ 0.28
DDB1-218ENST00000540784 CEP135Q66GS9 1140 aa16.82■□□□□ 0.28
DDB1-218ENST00000540784 JADE1Q6IE81 842 aa16.82■□□□□ 0.28
DDB1-218ENST00000540784 Q7L0L9 218 aa16.82■□□□□ 0.28
DDB1-218ENST00000540784 BRSK2Q8IWQ3 736 aa16.82■□□□□ 0.28
DDB1-218ENST00000540784 SLC39A11Q8N1S5 342 aa16.82■□□□□ 0.28
DDB1-218ENST00000540784 NELFBQ8WX92 580 aa16.82■□□□□ 0.28
DDB1-218ENST00000540784 C18orf25Q96B23 403 aaPredicted RBP16.82■□□□□ 0.28
DDB1-218ENST00000540784 DDX27Q96GQ7 796 aaKnown RBP16.82■□□□□ 0.28
DDB1-218ENST00000540784 UROC1Q96N76 676 aa16.82■□□□□ 0.28
DDB1-218ENST00000540784 PUF60Q9UHX1 559 aaKnown RBP16.82■□□□□ 0.28
DDB1-218ENST00000540784 UBQLN1Q9UMX0 589 aaKnown RBP16.82■□□□□ 0.28
DDB1-218ENST00000540784 EPOPA6NHQ4 379 aa16.81■□□□□ 0.28
DDB1-218ENST00000540784 CASTOR2A6NHX0 329 aa16.81■□□□□ 0.28
DDB1-218ENST00000540784 CETN3O15182 167 aa16.81■□□□□ 0.28
DDB1-218ENST00000540784 TADA2AO75478 443 aa16.81■□□□□ 0.28
DDB1-218ENST00000540784 CYP3A5P20815 502 aa16.81■□□□□ 0.28
DDB1-218ENST00000540784 RPL9P32969 192 aaKnown RBP16.81■□□□□ 0.28
DDB1-218ENST00000540784 PLCB3Q01970 1234 aa16.81■□□□□ 0.28
DDB1-218ENST00000540784 LRRC63Q05C16 580 aa16.81■□□□□ 0.28
DDB1-218ENST00000540784 TMEM132DQ14C87 1099 aa16.81■□□□□ 0.28
DDB1-218ENST00000540784 KLHL40Q2TBA0 621 aa16.81■□□□□ 0.28
DDB1-218ENST00000540784 ZCWPW2Q504Y3 356 aa16.81■□□□□ 0.28
DDB1-218ENST00000540784 CAVIN1Q6NZI2 390 aaKnown RBP16.81■□□□□ 0.28
DDB1-218ENST00000540784 DCLRE1AQ6PJP8 1040 aa16.81■□□□□ 0.28
DDB1-218ENST00000540784 SASS6Q6UVJ0 657 aa16.81■□□□□ 0.28
DDB1-218ENST00000540784 RBM43Q6ZSC3 357 aaKnown RBP16.81■□□□□ 0.28
DDB1-218ENST00000540784 NT5DC4Q86YG4 428 aa16.81■□□□□ 0.28
DDB1-218ENST00000540784 SPPL3Q8TCT6 385 aa16.81■□□□□ 0.28
DDB1-218ENST00000540784 CACTINQ8WUQ7 758 aaKnown RBP16.81■□□□□ 0.28
DDB1-218ENST00000540784 RABGGTAQ92696 567 aa16.81■□□□□ 0.28
DDB1-218ENST00000540784 TMEM169Q96HH4 297 aa16.81■□□□□ 0.28
DDB1-218ENST00000540784 IGSF21Q96ID5 467 aa16.81■□□□□ 0.28
DDB1-218ENST00000540784 MFSD14AQ96MC6 490 aa16.81■□□□□ 0.28
DDB1-218ENST00000540784 PDE11AQ9HCR9 933 aa16.81■□□□□ 0.28
DDB1-218ENST00000540784 ALG13Q9NP73 1137 aaKnown RBP16.81■□□□□ 0.28
DDB1-218ENST00000540784 PRG3Q9Y2Y8 225 aaPredicted RBP16.81■□□□□ 0.28
DDB1-218ENST00000540784 C2CD2Q9Y426 696 aa16.81■□□□□ 0.28
DDB1-218ENST00000540784 GBF1Q92538 1859 aa16.81■□□□□ 0.28
DDB1-218ENST00000540784 LAMA3Q16787 3333 aa16.81■□□□□ 0.28
DDB1-218ENST00000540784 BICDL2A1A5D9 508 aa16.8■□□□□ 0.28
DDB1-218ENST00000540784 ITGB1P05556 798 aa16.8■□□□□ 0.28
DDB1-218ENST00000540784 CLCNKBP51801 687 aa16.8■□□□□ 0.28
DDB1-218ENST00000540784 PMS1P54277 932 aaKnown RBP16.8■□□□□ 0.28
DDB1-218ENST00000540784 FKBP3Q00688 224 aaKnown RBP16.8■□□□□ 0.28
DDB1-218ENST00000540784 SOX4Q06945 474 aaPredicted RBP16.8■□□□□ 0.28
DDB1-218ENST00000540784 CYP24A1Q07973 514 aa16.8■□□□□ 0.28
DDB1-218ENST00000540784 PAK1Q13153 545 aa16.8■□□□□ 0.28
DDB1-218ENST00000540784 SPATA1Q5VX52 437 aa16.8■□□□□ 0.28
DDB1-218ENST00000540784 BEST2Q8NFU1 509 aa16.8■□□□□ 0.28
DDB1-218ENST00000540784 CCDC127Q96BQ5 260 aa16.8■□□□□ 0.28
DDB1-218ENST00000540784 FNBP1Q96RU3 617 aa16.8■□□□□ 0.28
DDB1-218ENST00000540784 TMEM63CQ9P1W3 806 aa16.8■□□□□ 0.28
DDB1-218ENST00000540784 DACH1Q9UI36 760 aa16.8■□□□□ 0.28
DDB1-218ENST00000540784 CTNND2Q9UQB3 1225 aa16.8■□□□□ 0.28
DDB1-218ENST00000540784 GRM6O15303 877 aa16.79■□□□□ 0.28
DDB1-218ENST00000540784 B3GAT3O94766 335 aa16.79■□□□□ 0.28
DDB1-218ENST00000540784 LETM1O95202 739 aaPredicted RBP16.79■□□□□ 0.28
DDB1-218ENST00000540784 NFICP08651 508 aa16.79■□□□□ 0.28
DDB1-218ENST00000540784 PSMC2P35998 433 aaKnown RBP16.79■□□□□ 0.28
DDB1-218ENST00000540784 CASP4P49662 377 aa16.79■□□□□ 0.28
DDB1-218ENST00000540784 STX17P56962 302 aa16.79■□□□□ 0.28
DDB1-218ENST00000540784 TFAMQ00059 246 aaKnown RBP16.79■□□□□ 0.28
DDB1-218ENST00000540784 UBE3AQ05086 875 aa16.79■□□□□ 0.28
DDB1-218ENST00000540784 PSMD6Q15008 389 aa16.79■□□□□ 0.28
DDB1-218ENST00000540784 PTPROQ16827 1216 aa16.79■□□□□ 0.28
DDB1-218ENST00000540784 UPP1Q16831 310 aa16.79■□□□□ 0.28
DDB1-218ENST00000540784 DUOXA2Q1HG44 320 aa16.79■□□□□ 0.28
DDB1-218ENST00000540784 POF1BQ8WVV4 589 aa16.79■□□□□ 0.28
DDB1-218ENST00000540784 GAS2L1Q99501 681 aaPredicted RBP16.79■□□□□ 0.28
DDB1-218ENST00000540784 CDX2Q99626 313 aaPredicted RBP16.79■□□□□ 0.28
DDB1-218ENST00000540784 PAAF1Q9BRP4 392 aa16.79■□□□□ 0.28
DDB1-218ENST00000540784 GOLGA2P5Q9HBQ8 144 aa16.79■□□□□ 0.28
DDB1-218ENST00000540784 MTMR10Q9NXD2 777 aa16.79■□□□□ 0.28
DDB1-218ENST00000540784 DPP3Q9NY33 737 aa16.79■□□□□ 0.28
DDB1-218ENST00000540784 CACNG4Q9UBN1 327 aa16.79■□□□□ 0.28
DDB1-218ENST00000540784 TUBGCP4Q9UGJ1 667 aa16.79■□□□□ 0.28
DDB1-218ENST00000540784 LZTS1Q9Y250 596 aa16.79■□□□□ 0.28
DDB1-218ENST00000540784 TRIM49BA6NDI0 452 aa16.78■□□□□ 0.28
DDB1-218ENST00000540784 PODXLO00592 558 aa16.78■□□□□ 0.28
DDB1-218ENST00000540784 MAPK13O15264 365 aa16.78■□□□□ 0.28
DDB1-218ENST00000540784 AKAP3O75969 853 aa16.78■□□□□ 0.28
DDB1-218ENST00000540784 DLATP10515 647 aaKnown RBP16.78■□□□□ 0.28
DDB1-218ENST00000540784 TNNI1P19237 187 aa16.78■□□□□ 0.28
DDB1-218ENST00000540784 IGFBP4P22692 258 aa16.78■□□□□ 0.28
DDB1-218ENST00000540784 WNT7BP56706 349 aa16.78■□□□□ 0.28
DDB1-218ENST00000540784 NFKBIBQ15653 356 aa16.78■□□□□ 0.28
DDB1-218ENST00000540784 TTI2Q6NXR4 508 aa16.78■□□□□ 0.28
DDB1-218ENST00000540784 FOXR2Q6PJQ5 311 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms