RNA–Protein interactions for RNA: ENST00000540659.1

PAAF1-209, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 349 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-209ENST00000540659 AMHR2Q16671 573 aa10.29□□□□□ -0.76
PAAF1-209ENST00000540659 WDR44Q5JSH3 913 aa10.29□□□□□ -0.76
PAAF1-209ENST00000540659 TAF3Q5VWG9 929 aa10.29□□□□□ -0.76
PAAF1-209ENST00000540659 C15orf39Q6ZRI6 1047 aa10.29□□□□□ -0.76
PAAF1-209ENST00000540659 ZNF662Q6ZS27 426 aa10.29□□□□□ -0.76
PAAF1-209ENST00000540659 APBB1IPQ7Z5R6 666 aaPredicted RBP10.29□□□□□ -0.76
PAAF1-209ENST00000540659 TMEM192Q8IY95 271 aa10.29□□□□□ -0.76
PAAF1-209ENST00000540659 KIAA0319LQ8IZA0 1049 aa10.29□□□□□ -0.76
PAAF1-209ENST00000540659 TXLNBQ8N3L3 684 aa10.29□□□□□ -0.76
PAAF1-209ENST00000540659 C7orf31Q8N865 590 aa10.29□□□□□ -0.76
PAAF1-209ENST00000540659 HELQQ8TDG4 1101 aa10.29□□□□□ -0.76
PAAF1-209ENST00000540659 SLC20A1Q8WUM9 679 aa10.29□□□□□ -0.76
PAAF1-209ENST00000540659 DNAJB3Q8WWF6 145 aa10.29□□□□□ -0.76
PAAF1-209ENST00000540659 DHX38Q92620 1227 aaKnown RBP10.29□□□□□ -0.76
PAAF1-209ENST00000540659 VTI1AQ96AJ9 217 aa10.29□□□□□ -0.76
PAAF1-209ENST00000540659 KREMEN1Q96MU8 473 aa10.29□□□□□ -0.76
PAAF1-209ENST00000540659 OSMRQ99650 979 aa10.29□□□□□ -0.76
PAAF1-209ENST00000540659 SEZ6LQ9BYH1 1024 aa10.29□□□□□ -0.76
PAAF1-209ENST00000540659 NFKBIZQ9BYH8 718 aa10.29□□□□□ -0.76
PAAF1-209ENST00000540659 PDZD7Q9H5P4 517 aa10.29□□□□□ -0.76
PAAF1-209ENST00000540659 PTPRHQ9HD43 1115 aa10.29□□□□□ -0.76
PAAF1-209ENST00000540659 C1orf112Q9NSG2 853 aa10.29□□□□□ -0.76
PAAF1-209ENST00000540659 MYO1AQ9UBC5 1043 aa10.29□□□□□ -0.76
PAAF1-209ENST00000540659 HDAC6Q9UBN7 1215 aa10.29□□□□□ -0.76
PAAF1-209ENST00000540659 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.29□□□□□ -0.76
PAAF1-209ENST00000540659 CPSF3Q9UKF6 684 aaKnown RBP10.29□□□□□ -0.76
PAAF1-209ENST00000540659 TNFSF13BQ9Y275 285 aa10.29□□□□□ -0.76
PAAF1-209ENST00000540659 COQ4Q9Y3A0 265 aa10.29□□□□□ -0.76
PAAF1-209ENST00000540659 V9GYY5 206 aaPredicted RBP10.29□□□□□ -0.76
PAAF1-209ENST00000540659 SMIM35A0A1B0GVV1 85 aa10.28□□□□□ -0.76
PAAF1-209ENST00000540659 HAS3O00219 553 aa10.28□□□□□ -0.76
PAAF1-209ENST00000540659 DDX3XO00571 662 aaKnown RBP eCLIP10.28□□□□□ -0.76
PAAF1-209ENST00000540659 PJA2O43164 708 aa10.28□□□□□ -0.76
PAAF1-209ENST00000540659 CYP26A1O43174 497 aa10.28□□□□□ -0.76
PAAF1-209ENST00000540659 TSPAN1O60635 241 aa10.28□□□□□ -0.76
PAAF1-209ENST00000540659 DUSP11O75319 330 aaKnown RBP10.28□□□□□ -0.76
PAAF1-209ENST00000540659 TACC1O75410 805 aa10.28□□□□□ -0.76
PAAF1-209ENST00000540659 CALCAP01258 141 aa10.28□□□□□ -0.76
PAAF1-209ENST00000540659 IGHA2P01877 340 aa10.28□□□□□ -0.76
PAAF1-209ENST00000540659 ATP1A1P05023 1023 aaKnown RBP10.28□□□□□ -0.76
PAAF1-209ENST00000540659 TMEM191BP0C7N4 346 aa10.28□□□□□ -0.76
PAAF1-209ENST00000540659 CXCL8P10145 99 aa10.28□□□□□ -0.76
PAAF1-209ENST00000540659 CCL5P13501 91 aa10.28□□□□□ -0.76
PAAF1-209ENST00000540659 ARF4P18085 180 aaPredicted RBP10.28□□□□□ -0.76
PAAF1-209ENST00000540659 CCND3P30281 292 aaPredicted RBP10.28□□□□□ -0.76
PAAF1-209ENST00000540659 CLDN10P78369 228 aa10.28□□□□□ -0.76
PAAF1-209ENST00000540659 PURAQ00577 322 aaKnown RBP10.28□□□□□ -0.76
PAAF1-209ENST00000540659 POU5F1BQ06416 359 aa10.28□□□□□ -0.76
PAAF1-209ENST00000540659 CACNB2Q08289 660 aaPredicted RBP10.28□□□□□ -0.76
PAAF1-209ENST00000540659 NCBP1Q09161 790 aaKnown RBP10.28□□□□□ -0.76
PAAF1-209ENST00000540659 BMS1Q14692 1282 aaKnown RBP10.28□□□□□ -0.76
PAAF1-209ENST00000540659 SURF1Q15526 300 aa10.28□□□□□ -0.76
PAAF1-209ENST00000540659 FAM187BQ17R55 369 aa10.28□□□□□ -0.76
PAAF1-209ENST00000540659 ZACNQ401N2 412 aa10.28□□□□□ -0.76
PAAF1-209ENST00000540659 GNASQ5JWF2 1037 aa10.28□□□□□ -0.76
PAAF1-209ENST00000540659 SCARA3Q6AZY7 606 aa10.28□□□□□ -0.76
PAAF1-209ENST00000540659 FAM43BQ6ZT52 329 aaPredicted RBP10.28□□□□□ -0.76
PAAF1-209ENST00000540659 SRGAP1Q7Z6B7 1085 aa10.28□□□□□ -0.76
PAAF1-209ENST00000540659 ZNF410Q86VK4 478 aa10.28□□□□□ -0.76
PAAF1-209ENST00000540659 IFNLR1Q8IU57 520 aaPredicted RBP10.28□□□□□ -0.76
PAAF1-209ENST00000540659 WDR49Q8IV35 697 aa10.28□□□□□ -0.76
PAAF1-209ENST00000540659 FMNL3Q8IVF7 1028 aa10.28□□□□□ -0.76
PAAF1-209ENST00000540659 GLYCTKQ8IVS8 523 aa10.28□□□□□ -0.76
PAAF1-209ENST00000540659 RPUSD2Q8IZ73 545 aaKnown RBP10.28□□□□□ -0.76
PAAF1-209ENST00000540659 LRRN4CLQ8ND94 238 aa10.28□□□□□ -0.76
PAAF1-209ENST00000540659 MNS1Q8NEH6 495 aa10.28□□□□□ -0.76
PAAF1-209ENST00000540659 AGPAT1Q99943 283 aa10.28□□□□□ -0.76
PAAF1-209ENST00000540659 CARD6Q9BX69 1037 aa10.28□□□□□ -0.76
PAAF1-209ENST00000540659 GCOM2Q9BZD3 368 aaPredicted RBP10.28□□□□□ -0.76
PAAF1-209ENST00000540659 MTMR12Q9C0I1 747 aa10.28□□□□□ -0.76
PAAF1-209ENST00000540659 UNC93B1Q9H1C4 597 aa10.28□□□□□ -0.76
PAAF1-209ENST00000540659 RPF1Q9H9Y2 349 aaKnown RBP10.28□□□□□ -0.76
PAAF1-209ENST00000540659 CDHR5Q9HBB8 845 aa10.28□□□□□ -0.76
PAAF1-209ENST00000540659 NAGPAQ9UK23 515 aa10.28□□□□□ -0.76
PAAF1-209ENST00000540659 CAPN6Q9Y6Q1 641 aa10.28□□□□□ -0.76
PAAF1-209ENST00000540659 TRIP12Q14669 1992 aaPredicted RBP10.28□□□□□ -0.76
PAAF1-209ENST00000540659 RALGAPA2Q2PPJ7 1873 aa10.27□□□□□ -0.76
PAAF1-209ENST00000540659 ZC3H11AO75152 810 aaKnown RBP eCLIP10.27□□□□□ -0.77
PAAF1-209ENST00000540659 GPR32O75388 356 aa10.27□□□□□ -0.77
PAAF1-209ENST00000540659 NPTXRO95502 500 aa10.27□□□□□ -0.77
PAAF1-209ENST00000540659 CST3P01034 146 aaPredicted RBP10.27□□□□□ -0.77
PAAF1-209ENST00000540659 TNNC2P02585 160 aa10.27□□□□□ -0.77
PAAF1-209ENST00000540659 STAG3L1P0CL83 205 aa10.27□□□□□ -0.77
PAAF1-209ENST00000540659 RARBP10826 455 aa10.27□□□□□ -0.77
PAAF1-209ENST00000540659 MCF2P10911 925 aa10.27□□□□□ -0.77
PAAF1-209ENST00000540659 GJA9P57773 515 aa10.27□□□□□ -0.77
PAAF1-209ENST00000540659 TFAMQ00059 246 aaKnown RBP10.27□□□□□ -0.77
PAAF1-209ENST00000540659 NCOA4Q13772 614 aa10.27□□□□□ -0.77
PAAF1-209ENST00000540659 NAA30Q147X3 362 aaPredicted RBP10.27□□□□□ -0.77
PAAF1-209ENST00000540659 PCBP1Q15365 356 aaKnown RBP eCLIP10.27□□□□□ -0.77
PAAF1-209ENST00000540659 NAB2Q15742 525 aa10.27□□□□□ -0.77
PAAF1-209ENST00000540659 FAM47CQ5HY64 1035 aa10.27□□□□□ -0.77
PAAF1-209ENST00000540659 C10orf76Q5T2E6 689 aa10.27□□□□□ -0.77
PAAF1-209ENST00000540659 ALKBH5Q6P6C2 394 aaKnown RBP10.27□□□□□ -0.77
PAAF1-209ENST00000540659 CATSPER4Q7RTX7 472 aa10.27□□□□□ -0.77
PAAF1-209ENST00000540659 TMEM130Q8N3G9 435 aa10.27□□□□□ -0.77
PAAF1-209ENST00000540659 ANKRD36BP1Q96IX9 119 aa10.27□□□□□ -0.77
PAAF1-209ENST00000540659 ALS2CR12Q96Q35 445 aa10.27□□□□□ -0.77
PAAF1-209ENST00000540659 ARID3AQ99856 593 aa10.27□□□□□ -0.77
PAAF1-209ENST00000540659 ADPGKQ9BRR6 497 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms