RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 PCDHB4Q9Y5E5 795 aa15.07■□□□□ 0
INO80E-203ENST00000540562 STK24Q9Y6E0 443 aa15.07■□□□□ 0
INO80E-203ENST00000540562 ASNSP08243 561 aa15.06■□□□□ 0
INO80E-203ENST00000540562 MARK3P27448 753 aa15.06■□□□□ 0
INO80E-203ENST00000540562 NSFP46459 744 aaKnown RBP15.06■□□□□ 0
INO80E-203ENST00000540562 NRLP54845 237 aa15.06■□□□□ 0
INO80E-203ENST00000540562 HMGCS2P54868 508 aa15.06■□□□□ 0
INO80E-203ENST00000540562 RPL7AP62424 266 aaKnown RBP15.06■□□□□ 0
INO80E-203ENST00000540562 MPP2Q14168 576 aa15.06■□□□□ 0
INO80E-203ENST00000540562 SMTNL2Q2TAL5 461 aa15.06■□□□□ 0
INO80E-203ENST00000540562 CCDC60Q8IWA6 550 aaPredicted RBP15.06■□□□□ 0
INO80E-203ENST00000540562 ATXN2LQ8WWM7 1075 aaKnown RBP15.06■□□□□ 0
INO80E-203ENST00000540562 SHC3Q92529 594 aa15.06■□□□□ 0
INO80E-203ENST00000540562 TLCD1Q96CP7 247 aa15.06■□□□□ 0
INO80E-203ENST00000540562 PDCD2LQ9BRP1 358 aa15.06■□□□□ 0
INO80E-203ENST00000540562 C12orf65Q9H3J6 166 aaKnown RBP15.06■□□□□ 0
INO80E-203ENST00000540562 RNF146Q9NTX7 359 aa15.06■□□□□ 0
INO80E-203ENST00000540562 KAT6AQ92794 2004 aa15.06■□□□□ 0
INO80E-203ENST00000540562 SPATA31A6Q5VVP1 1343 aa15.06■□□□□ 0
INO80E-203ENST00000540562 WDR91A4D1P6 747 aa15.06■□□□□ 0
INO80E-203ENST00000540562 FAM187AA6NFU0 413 aa15.06■□□□□ 0
INO80E-203ENST00000540562 MIF4GDA9UHW6 222 aaKnown RBP15.06■□□□□ 0
INO80E-203ENST00000540562 FSBPO95073 299 aa15.06■□□□□ 0
INO80E-203ENST00000540562 PSMC5P62195 406 aa15.06■□□□□ 0
INO80E-203ENST00000540562 SIX1Q15475 284 aaPredicted RBP15.06■□□□□ 0
INO80E-203ENST00000540562 SNRNP48Q6IEG0 339 aaKnown RBP15.06■□□□□ 0
INO80E-203ENST00000540562 LRRN4Q8WUT4 740 aa15.06■□□□□ 0
INO80E-203ENST00000540562 STRA6Q9BX79 667 aa15.06■□□□□ 0
INO80E-203ENST00000540562 TXLNGYQ9BZA5 131 aa15.06■□□□□ 0
INO80E-203ENST00000540562 TAOK3Q9H2K8 898 aa15.06■□□□□ 0
INO80E-203ENST00000540562 AAASQ9NRG9 546 aa15.06■□□□□ 0
INO80E-203ENST00000540562 TTLL13PA6NNM8 815 aa15.06■□□□□ 0
INO80E-203ENST00000540562 YY1P25490 414 aa15.06■□□□□ 0
INO80E-203ENST00000540562 HOXA7P31268 230 aaPredicted RBP15.06■□□□□ 0
INO80E-203ENST00000540562 DSG3P32926 999 aa15.06■□□□□ 0
INO80E-203ENST00000540562 KCNJ2P63252 427 aa15.06■□□□□ 0
INO80E-203ENST00000540562 FASTKD3Q14CZ7 662 aaKnown RBP15.06■□□□□ 0
INO80E-203ENST00000540562 B3GNT9Q6UX72 402 aa15.06■□□□□ 0
INO80E-203ENST00000540562 FUKQ8N0W3 1084 aa15.06■□□□□ 0
INO80E-203ENST00000540562 C4orf33Q8N1A6 199 aa15.06■□□□□ 0
INO80E-203ENST00000540562 SEC14L1Q92503 715 aa15.06■□□□□ 0
INO80E-203ENST00000540562 TARS2Q9BW92 718 aaKnown RBP15.06■□□□□ 0
INO80E-203ENST00000540562 POLR3FQ9H1D9 316 aaPredicted RBP15.06■□□□□ 0
INO80E-203ENST00000540562 AGAP1Q9UPQ3 857 aa15.06■□□□□ 0
INO80E-203ENST00000540562 A6NNZ2 444 aa15.05■□□□□ 0
INO80E-203ENST00000540562 WDR64B1ANS9 1081 aa15.05■□□□□ 0
INO80E-203ENST00000540562 CSDE1O75534 798 aaKnown RBP15.05■□□□□ 0
INO80E-203ENST00000540562 BRAFP15056 766 aa15.05■□□□□ 0
INO80E-203ENST00000540562 ATF2P15336 505 aa15.05■□□□□ 0
INO80E-203ENST00000540562 CTNNA2P26232 953 aa15.05■□□□□ 0
INO80E-203ENST00000540562 GTF2BQ00403 316 aa15.05■□□□□ 0
INO80E-203ENST00000540562 TUBB8Q3ZCM7 444 aa15.05■□□□□ 0
INO80E-203ENST00000540562 SPDYE2Q495Y8 402 aa15.05■□□□□ 0
INO80E-203ENST00000540562 TXNRD3NBQ6F5E7 133 aa15.05■□□□□ 0
INO80E-203ENST00000540562 C11orf63Q6NUN7 778 aa15.05■□□□□ 0
INO80E-203ENST00000540562 ZNF365Q70YC5 407 aa15.05■□□□□ 0
INO80E-203ENST00000540562 FAM160B2Q86V87 743 aa15.05■□□□□ 0
INO80E-203ENST00000540562 FHDC1Q9C0D6 1143 aaPredicted RBP15.05■□□□□ 0
INO80E-203ENST00000540562 WNT8AQ9H1J5 351 aa15.05■□□□□ 0
INO80E-203ENST00000540562 ALG13Q9NP73 1137 aaKnown RBP15.05■□□□□ 0
INO80E-203ENST00000540562 ANAPC5Q9UJX4 755 aa15.05■□□□□ 0
INO80E-203ENST00000540562 TPX2Q9ULW0 747 aaKnown RBP15.05■□□□□ 0
INO80E-203ENST00000540562 ATRNL1Q5VV63 1379 aa15.05■□□□□ -0
INO80E-203ENST00000540562 NRXN2Q9P2S2 1712 aa15.05■□□□□ -0
INO80E-203ENST00000540562 UBOX5O94941 541 aa15.05■□□□□ -0
INO80E-203ENST00000540562 KCNT1Q5JUK3 1230 aa15.05■□□□□ -0
INO80E-203ENST00000540562 CYP4A22Q5TCH4 519 aa15.05■□□□□ -0
INO80E-203ENST00000540562 ANKMY2Q8IV38 441 aa15.05■□□□□ -0
INO80E-203ENST00000540562 KLF6Q99612 283 aaPredicted RBP15.05■□□□□ -0
INO80E-203ENST00000540562 PCDHA3Q9Y5H8 950 aa15.05■□□□□ -0
INO80E-203ENST00000540562 MROH7Q68CQ1 1323 aa15.05■□□□□ -0
INO80E-203ENST00000540562 COL11A2P13942 1736 aaPredicted RBP15.04■□□□□ -0
INO80E-203ENST00000540562 ONECUT3O60422 494 aaPredicted RBP15.04■□□□□ -0
INO80E-203ENST00000540562 NR3C2P08235 984 aa15.04■□□□□ -0
INO80E-203ENST00000540562 PTGER2P43116 358 aa15.04■□□□□ -0
INO80E-203ENST00000540562 EIF3BP55884 814 aaKnown RBP15.04■□□□□ -0
INO80E-203ENST00000540562 CXCL9Q07325 125 aa15.04■□□□□ -0
INO80E-203ENST00000540562 CYP24A1Q07973 514 aa15.04■□□□□ -0
INO80E-203ENST00000540562 SMAD1Q15797 465 aaKnown RBP15.04■□□□□ -0
INO80E-203ENST00000540562 NBPF12Q5TAG4 269 aaPredicted RBP15.04■□□□□ -0
INO80E-203ENST00000540562 ANKS4BQ8N8V4 417 aa15.04■□□□□ -0
INO80E-203ENST00000540562 GTF3C4Q9UKN8 822 aa15.04■□□□□ -0
INO80E-203ENST00000540562 GOLGA8RI6L899 631 aa15.04■□□□□ -0
INO80E-203ENST00000540562 PODXLO00592 558 aa15.04■□□□□ -0
INO80E-203ENST00000540562 MAP3K6O95382 1288 aa15.04■□□□□ -0
INO80E-203ENST00000540562 HLA-DRAP01903 254 aa15.04■□□□□ -0
INO80E-203ENST00000540562 DPEP1P16444 411 aa15.04■□□□□ -0
INO80E-203ENST00000540562 MMP13P45452 471 aa15.04■□□□□ -0
INO80E-203ENST00000540562 ERFP50548 548 aa15.04■□□□□ -0
INO80E-203ENST00000540562 HSD17B4P51659 736 aa15.04■□□□□ -0
INO80E-203ENST00000540562 HIRAP54198 1017 aaPredicted RBP15.04■□□□□ -0
INO80E-203ENST00000540562 PRKCEQ02156 737 aa15.04■□□□□ -0
INO80E-203ENST00000540562 GAD2Q05329 585 aa15.04■□□□□ -0
INO80E-203ENST00000540562 ACAD10Q6JQN1 1059 aa15.04■□□□□ -0
INO80E-203ENST00000540562 SLC9A9Q8IVB4 645 aa15.04■□□□□ -0
INO80E-203ENST00000540562 OR5B17Q8NGF7 314 aa15.04■□□□□ -0
INO80E-203ENST00000540562 KIFAP3Q92845 792 aa15.04■□□□□ -0
INO80E-203ENST00000540562 CD101Q93033 1021 aa15.04■□□□□ -0
INO80E-203ENST00000540562 ZNF317Q96PQ6 595 aaPredicted RBP15.04■□□□□ -0
INO80E-203ENST00000540562 TMEM8AQ9HCN3 771 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 189.6 ms