RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 K7ERI5 159 aa13.73□□□□□ -0.21
COPS7A-211ENST00000540408 ECI2O75521 394 aa13.73□□□□□ -0.21
COPS7A-211ENST00000540408 MUTP22033 750 aa13.73□□□□□ -0.21
COPS7A-211ENST00000540408 CLCNKBP51801 687 aa13.73□□□□□ -0.21
COPS7A-211ENST00000540408 FOSBP53539 338 aa13.73□□□□□ -0.21
COPS7A-211ENST00000540408 ORC2Q13416 577 aaPredicted RBP13.73□□□□□ -0.21
COPS7A-211ENST00000540408 ME3Q16798 604 aa13.73□□□□□ -0.21
COPS7A-211ENST00000540408 GLRA4Q5JXX5 417 aa13.73□□□□□ -0.21
COPS7A-211ENST00000540408 VARS2Q5ST30 1063 aaKnown RBP13.73□□□□□ -0.21
COPS7A-211ENST00000540408 HAUS3Q68CZ6 603 aa13.73□□□□□ -0.21
COPS7A-211ENST00000540408 ZNF852Q6ZMS4 543 aa13.73□□□□□ -0.21
COPS7A-211ENST00000540408 NPAS3Q8IXF0 933 aa13.73□□□□□ -0.21
COPS7A-211ENST00000540408 DCLK2Q8N568 766 aa13.73□□□□□ -0.21
COPS7A-211ENST00000540408 SUMF1Q8NBK3 374 aa13.73□□□□□ -0.21
COPS7A-211ENST00000540408 NSUN7Q8NE18 718 aaKnown RBP13.73□□□□□ -0.21
COPS7A-211ENST00000540408 ING5Q8WYH8 240 aa13.73□□□□□ -0.21
COPS7A-211ENST00000540408 KIFAP3Q92845 792 aa13.73□□□□□ -0.21
COPS7A-211ENST00000540408 MCRS1Q96EZ8 462 aa13.73□□□□□ -0.21
COPS7A-211ENST00000540408 DDX27Q96GQ7 796 aaKnown RBP13.73□□□□□ -0.21
COPS7A-211ENST00000540408 CCDC113Q9H0I3 377 aa13.73□□□□□ -0.21
COPS7A-211ENST00000540408 TMEM60Q9H2L4 133 aa13.73□□□□□ -0.21
COPS7A-211ENST00000540408 LTB4R2Q9NPC1 389 aa13.73□□□□□ -0.21
COPS7A-211ENST00000540408 TOPORSQ9NS56 1045 aaPredicted RBP13.73□□□□□ -0.21
COPS7A-211ENST00000540408 SLC38A7Q9NVC3 462 aa13.73□□□□□ -0.21
COPS7A-211ENST00000540408 HCFC1R1Q9NWW0 138 aa13.73□□□□□ -0.21
COPS7A-211ENST00000540408 PRRG1O14668 218 aa13.72□□□□□ -0.21
COPS7A-211ENST00000540408 RHOP08100 348 aa13.72□□□□□ -0.21
COPS7A-211ENST00000540408 CD72P21854 359 aa13.72□□□□□ -0.21
COPS7A-211ENST00000540408 TKTP29401 623 aaKnown RBP13.72□□□□□ -0.21
COPS7A-211ENST00000540408 PPP2R5DQ14738 602 aa13.72□□□□□ -0.21
COPS7A-211ENST00000540408 UPP1Q16831 310 aa13.72□□□□□ -0.21
COPS7A-211ENST00000540408 TPRG1Q6ZUI0 275 aa13.72□□□□□ -0.21
COPS7A-211ENST00000540408 MAML2Q8IZL2 1156 aaPredicted RBP13.72□□□□□ -0.21
COPS7A-211ENST00000540408 ZNF461Q8TAF7 563 aa13.72□□□□□ -0.21
COPS7A-211ENST00000540408 BSNDQ8WZ55 320 aa13.72□□□□□ -0.21
COPS7A-211ENST00000540408 PPP1R10Q96QC0 940 aaKnown RBP13.72□□□□□ -0.21
COPS7A-211ENST00000540408 CCDC94Q9BW85 323 aaPredicted RBP13.72□□□□□ -0.21
COPS7A-211ENST00000540408 ZSCAN32Q9NX65 697 aa13.72□□□□□ -0.21
COPS7A-211ENST00000540408 USP20Q9Y2K6 914 aa13.72□□□□□ -0.21
COPS7A-211ENST00000540408 MTF2Q9Y483 593 aaPredicted RBP13.72□□□□□ -0.21
COPS7A-211ENST00000540408 H7C4K7 107 aa13.71□□□□□ -0.21
COPS7A-211ENST00000540408 MAN2B1O00754 1011 aa13.71□□□□□ -0.21
COPS7A-211ENST00000540408 WNT7AO00755 349 aa13.71□□□□□ -0.21
COPS7A-211ENST00000540408 ZNF197O14709 1029 aa13.71□□□□□ -0.21
COPS7A-211ENST00000540408 EIF5BO60841 1220 aaKnown RBP13.71□□□□□ -0.21
COPS7A-211ENST00000540408 OR52Z1P0C646 297 aa13.71□□□□□ -0.21
COPS7A-211ENST00000540408 RPS9P46781 194 aaKnown RBP13.71□□□□□ -0.21
COPS7A-211ENST00000540408 GNL2Q13823 731 aaKnown RBP13.71□□□□□ -0.21
COPS7A-211ENST00000540408 EEF1DP3Q658K8 133 aa13.71□□□□□ -0.21
COPS7A-211ENST00000540408 ELMOD1Q8N336 334 aa13.71□□□□□ -0.21
COPS7A-211ENST00000540408 CLDN23Q96B33 292 aa13.71□□□□□ -0.21
COPS7A-211ENST00000540408 ELSPBP1Q96BH3 223 aa13.71□□□□□ -0.21
COPS7A-211ENST00000540408 CXCL16Q9H2A7 254 aa13.71□□□□□ -0.21
COPS7A-211ENST00000540408 AVENQ9NQS1 362 aaPredicted RBP13.71□□□□□ -0.21
COPS7A-211ENST00000540408 DLL3Q9NYJ7 618 aa13.71□□□□□ -0.21
COPS7A-211ENST00000540408 TNFSF13BQ9Y275 285 aa13.71□□□□□ -0.21
COPS7A-211ENST00000540408 STK24Q9Y6E0 443 aa13.71□□□□□ -0.21
COPS7A-211ENST00000540408 GVINP1Q7Z2Y8 2422 aa13.71□□□□□ -0.22
COPS7A-211ENST00000540408 MYH15Q9Y2K3 1946 aa13.7□□□□□ -0.22
COPS7A-211ENST00000540408 PHLPP2Q6ZVD8 1323 aa13.7□□□□□ -0.22
COPS7A-211ENST00000540408 SMIM28A0A1B0GU29 152 aa13.7□□□□□ -0.22
COPS7A-211ENST00000540408 MED19A0JLT2 244 aaPredicted RBP13.7□□□□□ -0.22
COPS7A-211ENST00000540408 ARHGEF37A1IGU5 675 aa13.7□□□□□ -0.22
COPS7A-211ENST00000540408 CCDC169A6NNP5 214 aa13.7□□□□□ -0.22
COPS7A-211ENST00000540408 JAK2O60674 1132 aa13.7□□□□□ -0.22
COPS7A-211ENST00000540408 CCT6AP40227 531 aaKnown RBP13.7□□□□□ -0.22
COPS7A-211ENST00000540408 BRCC3P46736 316 aa13.7□□□□□ -0.22
COPS7A-211ENST00000540408 ARPP19P56211 112 aa13.7□□□□□ -0.22
COPS7A-211ENST00000540408 ROR1Q01973 937 aa13.7□□□□□ -0.22
COPS7A-211ENST00000540408 ADCY1Q08828 1119 aa13.7□□□□□ -0.22
COPS7A-211ENST00000540408 ZNF174Q15697 407 aa13.7□□□□□ -0.22
COPS7A-211ENST00000540408 RSPO4Q2I0M5 234 aaPredicted RBP13.7□□□□□ -0.22
COPS7A-211ENST00000540408 CYP4A22Q5TCH4 519 aa13.7□□□□□ -0.22
COPS7A-211ENST00000540408 NT5DC1Q5TFE4 455 aa13.7□□□□□ -0.22
COPS7A-211ENST00000540408 IQCEQ6IPM2 695 aa13.7□□□□□ -0.22
COPS7A-211ENST00000540408 SLC8B1Q6J4K2 584 aa13.7□□□□□ -0.22
COPS7A-211ENST00000540408 DNASE1L2Q92874 299 aa13.7□□□□□ -0.22
COPS7A-211ENST00000540408 CORO1BQ9BR76 489 aa13.7□□□□□ -0.22
COPS7A-211ENST00000540408 TCHPQ9BT92 498 aa13.7□□□□□ -0.22
COPS7A-211ENST00000540408 FAM126AQ9BYI3 521 aaPredicted RBP13.7□□□□□ -0.22
COPS7A-211ENST00000540408 BHMT2Q9H2M3 363 aa13.7□□□□□ -0.22
COPS7A-211ENST00000540408 BRD9Q9H8M2 597 aa13.7□□□□□ -0.22
COPS7A-211ENST00000540408 CYP4F11Q9HBI6 524 aa13.7□□□□□ -0.22
COPS7A-211ENST00000540408 ZFP14Q9HCL3 533 aa13.7□□□□□ -0.22
COPS7A-211ENST00000540408 HEBP1Q9NRV9 189 aa13.7□□□□□ -0.22
COPS7A-211ENST00000540408 NUB1Q9Y5A7 615 aa13.7□□□□□ -0.22
COPS7A-211ENST00000540408 EP300Q09472 2414 aaPredicted RBP13.69□□□□□ -0.22
COPS7A-211ENST00000540408 MIA3Q5JRA6 1907 aa13.69□□□□□ -0.22
COPS7A-211ENST00000540408 PRR5-ARHGAP8B1AHC4 643 aa13.69□□□□□ -0.22
COPS7A-211ENST00000540408 I3L4J1 428 aa13.69□□□□□ -0.22
COPS7A-211ENST00000540408 SYN3O14994 580 aa13.69□□□□□ -0.22
COPS7A-211ENST00000540408 TBC1D4O60343 1298 aa13.69□□□□□ -0.22
COPS7A-211ENST00000540408 MICAL2O94851 1124 aa13.69□□□□□ -0.22
COPS7A-211ENST00000540408 ABLIM3O94929 683 aa13.69□□□□□ -0.22
COPS7A-211ENST00000540408 LARGE1O95461 756 aa13.69□□□□□ -0.22
COPS7A-211ENST00000540408 ATF2P15336 505 aa13.69□□□□□ -0.22
COPS7A-211ENST00000540408 TARSP26639 723 aaKnown RBP13.69□□□□□ -0.22
COPS7A-211ENST00000540408 RPL9P32969 192 aaKnown RBP13.69□□□□□ -0.22
COPS7A-211ENST00000540408 GRM5P41594 1212 aa13.69□□□□□ -0.22
COPS7A-211ENST00000540408 NEK4P51957 841 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms