RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 GCNT3O95395 438 aa16.45■□□□□ 0.22
UBE3B-212ENST00000540230 KCNE1P15382 129 aa16.45■□□□□ 0.22
UBE3B-212ENST00000540230 SCP2P22307 547 aa16.45■□□□□ 0.22
UBE3B-212ENST00000540230 PUS10Q3MIT2 529 aaKnown RBP16.45■□□□□ 0.22
UBE3B-212ENST00000540230 RTP2Q5QGT7 225 aa16.45■□□□□ 0.22
UBE3B-212ENST00000540230 KANK3Q6NY19 840 aa16.45■□□□□ 0.22
UBE3B-212ENST00000540230 IQUBQ8NA54 791 aa16.45■□□□□ 0.22
UBE3B-212ENST00000540230 SPATA32Q96LK8 384 aa16.45■□□□□ 0.22
UBE3B-212ENST00000540230 S1PR5Q9H228 398 aa16.45■□□□□ 0.22
UBE3B-212ENST00000540230 CUEDC2Q9H467 287 aa16.45■□□□□ 0.22
UBE3B-212ENST00000540230 GDPD2Q9HCC8 539 aa16.45■□□□□ 0.22
UBE3B-212ENST00000540230 STK39Q9UEW8 545 aa16.45■□□□□ 0.22
UBE3B-212ENST00000540230 USP15Q9Y4E8 981 aaPredicted RBP16.45■□□□□ 0.22
UBE3B-212ENST00000540230 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.44■□□□□ 0.22
UBE3B-212ENST00000540230 TTC26A0AVF1 554 aa16.44■□□□□ 0.22
UBE3B-212ENST00000540230 FSD2A1L4K1 749 aa16.44■□□□□ 0.22
UBE3B-212ENST00000540230 TNFRSF10AO00220 468 aa16.44■□□□□ 0.22
UBE3B-212ENST00000540230 OGTO15294 1046 aa16.44■□□□□ 0.22
UBE3B-212ENST00000540230 TEX28O15482 410 aa16.44■□□□□ 0.22
UBE3B-212ENST00000540230 CLTAP09496 248 aa16.44■□□□□ 0.22
UBE3B-212ENST00000540230 CLCN4P51793 760 aa16.44■□□□□ 0.22
UBE3B-212ENST00000540230 ENOX2Q16206 610 aaKnown RBP16.44■□□□□ 0.22
UBE3B-212ENST00000540230 UPP1Q16831 310 aa16.44■□□□□ 0.22
UBE3B-212ENST00000540230 PRSS55Q6UWB4 352 aaPredicted RBP16.44■□□□□ 0.22
UBE3B-212ENST00000540230 GRAMD1CQ8IYS0 662 aa16.44■□□□□ 0.22
UBE3B-212ENST00000540230 C12orf76Q8N812 135 aaPredicted RBP16.44■□□□□ 0.22
UBE3B-212ENST00000540230 CASP10Q92851 521 aa16.44■□□□□ 0.22
UBE3B-212ENST00000540230 KHSRPQ92945 711 aaKnown RBP eCLIP16.44■□□□□ 0.22
UBE3B-212ENST00000540230 MSTO1Q9BUK6 570 aa16.44■□□□□ 0.22
UBE3B-212ENST00000540230 BLZF1Q9H2G9 400 aa16.44■□□□□ 0.22
UBE3B-212ENST00000540230 FAM13BQ9NYF5 915 aa16.44■□□□□ 0.22
UBE3B-212ENST00000540230 TUBGCP4Q9UGJ1 667 aa16.44■□□□□ 0.22
UBE3B-212ENST00000540230 SF3B1O75533 1304 aaKnown RBP eCLIP16.44■□□□□ 0.22
UBE3B-212ENST00000540230 BDP1A6H8Y1 2624 aa16.43■□□□□ 0.22
UBE3B-212ENST00000540230 A0A1B0GVL5 298 aa16.43■□□□□ 0.22
UBE3B-212ENST00000540230 TMEM189-UBE2V1I3L0A0 370 aa16.43■□□□□ 0.22
UBE3B-212ENST00000540230 I3L4J1 428 aa16.43■□□□□ 0.22
UBE3B-212ENST00000540230 B3GAT3O94766 335 aa16.43■□□□□ 0.22
UBE3B-212ENST00000540230 RPL17P18621 184 aaKnown RBP16.43■□□□□ 0.22
UBE3B-212ENST00000540230 KLRC2P26717 231 aa16.43■□□□□ 0.22
UBE3B-212ENST00000540230 ADSSP30520 456 aa16.43■□□□□ 0.22
UBE3B-212ENST00000540230 BRCC3P46736 316 aa16.43■□□□□ 0.22
UBE3B-212ENST00000540230 ZP2Q05996 745 aa16.43■□□□□ 0.22
UBE3B-212ENST00000540230 USP41Q3LFD5 358 aa16.43■□□□□ 0.22
UBE3B-212ENST00000540230 L1TD1Q5T7N2 865 aaKnown RBP16.43■□□□□ 0.22
UBE3B-212ENST00000540230 FAM171A1Q5VUB5 890 aa16.43■□□□□ 0.22
UBE3B-212ENST00000540230 KIAA1841Q6NSI8 718 aa16.43■□□□□ 0.22
UBE3B-212ENST00000540230 GLYCTKQ8IVS8 523 aa16.43■□□□□ 0.22
UBE3B-212ENST00000540230 TMEM87AQ8NBN3 555 aa16.43■□□□□ 0.22
UBE3B-212ENST00000540230 ZSWIM2Q8NEG5 633 aa16.43■□□□□ 0.22
UBE3B-212ENST00000540230 RIN2Q8WYP3 895 aaPredicted RBP16.43■□□□□ 0.22
UBE3B-212ENST00000540230 SUSD6Q92537 303 aa16.43■□□□□ 0.22
UBE3B-212ENST00000540230 HVCN1Q96D96 273 aa16.43■□□□□ 0.22
UBE3B-212ENST00000540230 EMILIN2Q9BXX0 1053 aa16.43■□□□□ 0.22
UBE3B-212ENST00000540230 RXFP1Q9HBX9 757 aa16.43■□□□□ 0.22
UBE3B-212ENST00000540230 SERTAD1Q9UHV2 236 aa16.43■□□□□ 0.22
UBE3B-212ENST00000540230 KCNH3Q9ULD8 1083 aa16.43■□□□□ 0.22
UBE3B-212ENST00000540230 STYXL1Q9Y6J8 313 aa16.43■□□□□ 0.22
UBE3B-212ENST00000540230 LACTBL1A8MY62 500 aa16.42■□□□□ 0.22
UBE3B-212ENST00000540230 PODXLO00592 558 aa16.42■□□□□ 0.22
UBE3B-212ENST00000540230 ACTN4O43707 911 aaKnown RBP16.42■□□□□ 0.22
UBE3B-212ENST00000540230 PRPF6O94906 941 aaKnown RBP16.42■□□□□ 0.22
UBE3B-212ENST00000540230 PFKFB1P16118 471 aa16.42■□□□□ 0.22
UBE3B-212ENST00000540230 AFMP43652 599 aa16.42■□□□□ 0.22
UBE3B-212ENST00000540230 ACOT2P49753 483 aa16.42■□□□□ 0.22
UBE3B-212ENST00000540230 ASIC1P78348 528 aa16.42■□□□□ 0.22
UBE3B-212ENST00000540230 TPRNQ4KMQ1 711 aa16.42■□□□□ 0.22
UBE3B-212ENST00000540230 ADALQ6DHV7 355 aa16.42■□□□□ 0.22
UBE3B-212ENST00000540230 CEP57Q86XR8 500 aa16.42■□□□□ 0.22
UBE3B-212ENST00000540230 CCDC65Q8IXS2 484 aa16.42■□□□□ 0.22
UBE3B-212ENST00000540230 C7orf25Q9BPX7 421 aa16.42■□□□□ 0.22
UBE3B-212ENST00000540230 CPSF3Q9UKF6 684 aaKnown RBP16.42■□□□□ 0.22
UBE3B-212ENST00000540230 WEE2P0C1S8 567 aa16.41■□□□□ 0.22
UBE3B-212ENST00000540230 SRGAP2BP0DMP2 458 aa16.41■□□□□ 0.22
UBE3B-212ENST00000540230 ABCD1P33897 745 aa16.41■□□□□ 0.22
UBE3B-212ENST00000540230 GUCY2FP51841 1108 aa16.41■□□□□ 0.22
UBE3B-212ENST00000540230 CUL4BQ13620 913 aa16.41■□□□□ 0.22
UBE3B-212ENST00000540230 CNNM4Q6P4Q7 775 aa16.41■□□□□ 0.22
UBE3B-212ENST00000540230 DCLRE1AQ6PJP8 1040 aa16.41■□□□□ 0.22
UBE3B-212ENST00000540230 CRELD2Q6UXH1 353 aaPredicted RBP16.41■□□□□ 0.22
UBE3B-212ENST00000540230 UROC1Q96N76 676 aa16.41■□□□□ 0.22
UBE3B-212ENST00000540230 ACCSQ96QU6 501 aa16.41■□□□□ 0.22
UBE3B-212ENST00000540230 SLC38A7Q9NVC3 462 aa16.41■□□□□ 0.22
UBE3B-212ENST00000540230 AGO2Q9UKV8 859 aaKnown RBP16.41■□□□□ 0.22
UBE3B-212ENST00000540230 FAM50BQ9Y247 325 aa16.41■□□□□ 0.22
UBE3B-212ENST00000540230 HPSEQ9Y251 543 aa16.41■□□□□ 0.22
UBE3B-212ENST00000540230 ADRB2P07550 413 aa16.4■□□□□ 0.22
UBE3B-212ENST00000540230 CMA1P23946 247 aa16.4■□□□□ 0.22
UBE3B-212ENST00000540230 TKTP29401 623 aaKnown RBP16.4■□□□□ 0.22
UBE3B-212ENST00000540230 PPP2R3AQ06190 1150 aa16.4■□□□□ 0.22
UBE3B-212ENST00000540230 EHHADHQ08426 723 aa16.4■□□□□ 0.22
UBE3B-212ENST00000540230 ZBTB6Q15916 424 aa16.4■□□□□ 0.22
UBE3B-212ENST00000540230 RARS2Q5T160 578 aaKnown RBP16.4■□□□□ 0.22
UBE3B-212ENST00000540230 ADHFE1Q8IWW8 467 aa16.4■□□□□ 0.22
UBE3B-212ENST00000540230 GJD3Q8N144 294 aa16.4■□□□□ 0.22
UBE3B-212ENST00000540230 LNX1Q8TBB1 728 aaPredicted RBP16.4■□□□□ 0.22
UBE3B-212ENST00000540230 PIK3R5Q8WYR1 880 aa16.4■□□□□ 0.22
UBE3B-212ENST00000540230 POMGNT1Q8WZA1 660 aa16.4■□□□□ 0.22
UBE3B-212ENST00000540230 FAM212AQ96EL1 285 aa16.4■□□□□ 0.22
UBE3B-212ENST00000540230 KIF12Q96FN5 646 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms