RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 RHOBTB3O94955 611 aa9.25□□□□□ -0.93
DDB1-217ENST00000540166 PAEPP09466 180 aa9.25□□□□□ -0.93
DDB1-217ENST00000540166 FAM200BP0CF97 657 aa9.25□□□□□ -0.93
DDB1-217ENST00000540166 COG7P83436 770 aa9.25□□□□□ -0.93
DDB1-217ENST00000540166 CALCRLQ16602 461 aa9.25□□□□□ -0.93
DDB1-217ENST00000540166 FIGNQ5HY92 759 aa9.25□□□□□ -0.93
DDB1-217ENST00000540166 SH3D19Q5HYK7 790 aa9.25□□□□□ -0.93
DDB1-217ENST00000540166 ZNF572Q7Z3I7 529 aaPredicted RBP9.25□□□□□ -0.93
DDB1-217ENST00000540166 TMC3Q7Z5M5 1100 aa9.25□□□□□ -0.93
DDB1-217ENST00000540166 NEK8Q86SG6 692 aa9.25□□□□□ -0.93
DDB1-217ENST00000540166 PDCD7Q8N8D1 485 aaKnown RBP9.25□□□□□ -0.93
DDB1-217ENST00000540166 EIF1ADQ8N9N8 165 aaKnown RBP9.25□□□□□ -0.93
DDB1-217ENST00000540166 GIMAP8Q8ND71 665 aaPredicted RBP9.25□□□□□ -0.93
DDB1-217ENST00000540166 NEDD1Q8NHV4 660 aa9.25□□□□□ -0.93
DDB1-217ENST00000540166 ERP27Q96DN0 273 aa9.25□□□□□ -0.93
DDB1-217ENST00000540166 TRIM51Q9BSJ1 452 aa9.25□□□□□ -0.93
DDB1-217ENST00000540166 CARD9Q9H257 536 aa9.25□□□□□ -0.93
DDB1-217ENST00000540166 DBR1Q9UK59 544 aaKnown RBP9.25□□□□□ -0.93
DDB1-217ENST00000540166 LRCH1Q9Y2L9 728 aa9.25□□□□□ -0.93
DDB1-217ENST00000540166 SPDYE16A6NNV3 312 aaPredicted RBP9.25□□□□□ -0.93
DDB1-217ENST00000540166 DCTN3O75935 186 aa9.25□□□□□ -0.93
DDB1-217ENST00000540166 SHBGP04278 402 aa9.25□□□□□ -0.93
DDB1-217ENST00000540166 UBTFL6P0CB48 400 aaPredicted RBP9.25□□□□□ -0.93
DDB1-217ENST00000540166 GJA8P48165 433 aa9.25□□□□□ -0.93
DDB1-217ENST00000540166 SCNN1BP51168 640 aa9.25□□□□□ -0.93
DDB1-217ENST00000540166 STRN3Q13033 797 aa9.25□□□□□ -0.93
DDB1-217ENST00000540166 LBRQ14739 615 aaKnown RBP9.25□□□□□ -0.93
DDB1-217ENST00000540166 NAB2Q15742 525 aa9.25□□□□□ -0.93
DDB1-217ENST00000540166 GPAT2Q6NUI2 795 aa9.25□□□□□ -0.93
DDB1-217ENST00000540166 PDXDC1Q6P996 788 aa9.25□□□□□ -0.93
DDB1-217ENST00000540166 CCDC62Q6P9F0 684 aa9.25□□□□□ -0.93
DDB1-217ENST00000540166 RNF207Q6ZRF8 634 aa9.25□□□□□ -0.93
DDB1-217ENST00000540166 RBBP8NLQ8NC74 664 aaPredicted RBP9.25□□□□□ -0.93
DDB1-217ENST00000540166 ZNF507Q8TCN5 953 aa9.25□□□□□ -0.93
DDB1-217ENST00000540166 ZFAND2BQ8WV99 257 aa9.25□□□□□ -0.93
DDB1-217ENST00000540166 ANKS1AQ92625 1134 aa9.25□□□□□ -0.93
DDB1-217ENST00000540166 TRAPPC9Q96Q05 1148 aa9.25□□□□□ -0.93
DDB1-217ENST00000540166 NDNQ99608 321 aa9.25□□□□□ -0.93
DDB1-217ENST00000540166 CFHR5Q9BXR6 569 aa9.25□□□□□ -0.93
DDB1-217ENST00000540166 TRIM9Q9C026 710 aa9.25□□□□□ -0.93
DDB1-217ENST00000540166 RMI1Q9H9A7 625 aa9.25□□□□□ -0.93
DDB1-217ENST00000540166 GALNT8Q9NY28 637 aa9.25□□□□□ -0.93
DDB1-217ENST00000540166 DUOX1Q9NRD9 1551 aa9.25□□□□□ -0.93
DDB1-217ENST00000540166 LAMA4Q16363 1823 aa9.25□□□□□ -0.93
DDB1-217ENST00000540166 MYH3P11055 1940 aa9.25□□□□□ -0.93
DDB1-217ENST00000540166 TMEM110-MUSTN1A8MSY1 372 aa9.25□□□□□ -0.93
DDB1-217ENST00000540166 GSTT1P30711 240 aa9.25□□□□□ -0.93
DDB1-217ENST00000540166 ADCYAP1R1P41586 468 aa9.25□□□□□ -0.93
DDB1-217ENST00000540166 SLC29A2Q14542 456 aa9.25□□□□□ -0.93
DDB1-217ENST00000540166 FBXO11Q86XK2 927 aa9.25□□□□□ -0.93
DDB1-217ENST00000540166 NME8Q8N427 588 aa9.25□□□□□ -0.93
DDB1-217ENST00000540166 SMC6Q96SB8 1091 aa9.25□□□□□ -0.93
DDB1-217ENST00000540166 MTRQ99707 1265 aa9.25□□□□□ -0.93
DDB1-217ENST00000540166 DMAP1Q9NPF5 467 aaPredicted RBP9.25□□□□□ -0.93
DDB1-217ENST00000540166 RBPJLQ9UBG7 517 aa9.25□□□□□ -0.93
DDB1-217ENST00000540166 TRIM33Q9UPN9 1127 aa9.25□□□□□ -0.93
DDB1-217ENST00000540166 AGAP1Q9UPQ3 857 aa9.25□□□□□ -0.93
DDB1-217ENST00000540166 ATRNL1Q5VV63 1379 aa9.25□□□□□ -0.93
DDB1-217ENST00000540166 AKAP11Q9UKA4 1901 aa9.25□□□□□ -0.93
DDB1-217ENST00000540166 O00370 1275 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 BRAFP15056 766 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 ACADSP16219 412 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 SP100P23497 879 aaPredicted RBP9.24□□□□□ -0.93
DDB1-217ENST00000540166 SNAP25P60880 206 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 SBK1Q52WX2 424 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 HERC4Q5GLZ8 1057 aaPredicted RBP9.24□□□□□ -0.93
DDB1-217ENST00000540166 PRAMEF19Q5SWL8 479 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 TTI2Q6NXR4 508 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 IRF2BP1Q8IU81 584 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 REXO1Q8N1G1 1221 aaKnown RBP9.24□□□□□ -0.93
DDB1-217ENST00000540166 OLFM3Q96PB7 478 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 IQCGQ9H095 443 aaKnown RBP9.24□□□□□ -0.93
DDB1-217ENST00000540166 PABPC3Q9H361 631 aaKnown RBP9.24□□□□□ -0.93
DDB1-217ENST00000540166 DCLRE1BQ9H816 532 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 MTMR4Q9NYA4 1195 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 WDR35Q9P2L0 1181 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 H0YGN5 161 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 LAD1O00515 517 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 ZNF263O14978 683 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 PEX10O60683 326 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 ATP9AO75110 1047 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 TMCC1O94876 653 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 ZCCHC18P0CG32 403 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 IMPDH2P12268 514 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 CDR2Q01850 454 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 TNFAIP2Q03169 654 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 TKFCQ3LXA3 575 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 ZFYVE27Q5T4F4 411 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 SEL1L2Q5TEA6 688 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 MYOCDQ8IZQ8 938 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 SHCBP1Q8NEM2 672 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 DTX3LQ8TDB6 740 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 TBCKQ8TEA7 893 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 LARP4BQ92615 738 aaKnown RBP9.24□□□□□ -0.93
DDB1-217ENST00000540166 GRAMD1AQ96CP6 724 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 AK8Q96MA6 479 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 TINF2Q9BSI4 451 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 GOLPH3Q9H4A6 298 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 ASIC3Q9UHC3 531 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 TBK1Q9UHD2 729 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms