RNA–Protein interactions for RNA: ENST00000540128.1

TRIM65-202, Transcript of tripartite motif containing 65, humanhuman

TSL 3

Gene TRIM65, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-202ENST00000540128 FAM213AQ9BRX8 229 aa24.01■■□□□ 1.43
TRIM65-202ENST00000540128 VN1R3Q9BXE9 311 aa24.01■■□□□ 1.43
TRIM65-202ENST00000540128 DERAQ9Y315 318 aa24.01■■□□□ 1.43
TRIM65-202ENST00000540128 CYP3A5P20815 502 aa24■■□□□ 1.43
TRIM65-202ENST00000540128 HSP90AA2PQ14568 343 aaPredicted RBP24■■□□□ 1.43
TRIM65-202ENST00000540128 COBLL1Q53SF7 1204 aa24■■□□□ 1.43
TRIM65-202ENST00000540128 GPD1LQ8N335 351 aa24■■□□□ 1.43
TRIM65-202ENST00000540128 ZSWIM2Q8NEG5 633 aa24■■□□□ 1.43
TRIM65-202ENST00000540128 SAAL1Q96ER3 474 aa24■■□□□ 1.43
TRIM65-202ENST00000540128 PAAF1Q9BRP4 392 aa24■■□□□ 1.43
TRIM65-202ENST00000540128 PCIF1Q9H4Z3 704 aa24■■□□□ 1.43
TRIM65-202ENST00000540128 KIAA1586Q9HCI6 787 aa24■■□□□ 1.43
TRIM65-202ENST00000540128 NGRNQ9NPE2 291 aaKnown RBP24■■□□□ 1.43
TRIM65-202ENST00000540128 HSPBP1Q9NZL4 362 aa24■■□□□ 1.43
TRIM65-202ENST00000540128 CDH23Q9H251 3354 aa23.99■■□□□ 1.43
TRIM65-202ENST00000540128 PLXNA4Q9HCM2 1894 aa23.99■■□□□ 1.43
TRIM65-202ENST00000540128 CASTOR2A6NHX0 329 aa23.99■■□□□ 1.43
TRIM65-202ENST00000540128 TMEM189-UBE2V1I3L0A0 370 aa23.99■■□□□ 1.43
TRIM65-202ENST00000540128 PDXKO00764 312 aa23.99■■□□□ 1.43
TRIM65-202ENST00000540128 IL18RAPO95256 599 aa23.99■■□□□ 1.43
TRIM65-202ENST00000540128 RPL9P32969 192 aaKnown RBP23.99■■□□□ 1.43
TRIM65-202ENST00000540128 IRS1P35568 1242 aa23.99■■□□□ 1.43
TRIM65-202ENST00000540128 UPP1Q16831 310 aa23.99■■□□□ 1.43
TRIM65-202ENST00000540128 DCLRE1AQ6PJP8 1040 aa23.99■■□□□ 1.43
TRIM65-202ENST00000540128 BRSK2Q8IWQ3 736 aa23.99■■□□□ 1.43
TRIM65-202ENST00000540128 ERCC4Q92889 916 aaPredicted RBP23.99■■□□□ 1.43
TRIM65-202ENST00000540128 NSUN3Q9H649 340 aaKnown RBP23.99■■□□□ 1.43
TRIM65-202ENST00000540128 F8W810 466 aa23.98■■□□□ 1.43
TRIM65-202ENST00000540128 MYBPC2Q14324 1141 aa23.98■■□□□ 1.43
TRIM65-202ENST00000540128 ZNF658Q5TYW1 1059 aaPredicted RBP23.98■■□□□ 1.43
TRIM65-202ENST00000540128 CD300LGQ6UXG3 332 aa23.98■■□□□ 1.43
TRIM65-202ENST00000540128 SLC9A9Q8IVB4 645 aa23.98■■□□□ 1.43
TRIM65-202ENST00000540128 VPS52Q8N1B4 723 aa23.98■■□□□ 1.43
TRIM65-202ENST00000540128 C18orf25Q96B23 403 aaPredicted RBP23.98■■□□□ 1.43
TRIM65-202ENST00000540128 KIF12Q96FN5 646 aa23.98■■□□□ 1.43
TRIM65-202ENST00000540128 DMAC2Q9NW81 257 aa23.98■■□□□ 1.43
TRIM65-202ENST00000540128 CACNG4Q9UBN1 327 aa23.98■■□□□ 1.43
TRIM65-202ENST00000540128 ADAM28Q9UKQ2 775 aa23.98■■□□□ 1.43
TRIM65-202ENST00000540128 UBQLN1Q9UMX0 589 aaKnown RBP23.98■■□□□ 1.43
TRIM65-202ENST00000540128 TRAF3IP3Q9Y228 551 aa23.98■■□□□ 1.43
TRIM65-202ENST00000540128 C2CD2Q9Y426 696 aa23.98■■□□□ 1.43
TRIM65-202ENST00000540128 IRAK3Q9Y616 596 aa23.98■■□□□ 1.43
TRIM65-202ENST00000540128 GOLGA8IPA6NC78 632 aa23.97■■□□□ 1.43
TRIM65-202ENST00000540128 GOLGA8JA6NMD2 632 aa23.97■■□□□ 1.43
TRIM65-202ENST00000540128 CLIC2O15247 247 aa23.97■■□□□ 1.43
TRIM65-202ENST00000540128 TADA2AO75478 443 aa23.97■■□□□ 1.43
TRIM65-202ENST00000540128 CTSAP10619 480 aa23.97■■□□□ 1.43
TRIM65-202ENST00000540128 LRPAP1P30533 357 aa23.97■■□□□ 1.43
TRIM65-202ENST00000540128 CLCNKBP51801 687 aa23.97■■□□□ 1.43
TRIM65-202ENST00000540128 SPAG1Q07617 926 aa23.97■■□□□ 1.43
TRIM65-202ENST00000540128 NT5DC4Q86YG4 428 aa23.97■■□□□ 1.43
TRIM65-202ENST00000540128 GPR65Q8IYL9 337 aa23.97■■□□□ 1.43
TRIM65-202ENST00000540128 MRPL43Q8N983 215 aaKnown RBP23.97■■□□□ 1.43
TRIM65-202ENST00000540128 XXYLT1Q8NBI6 393 aa23.97■■□□□ 1.43
TRIM65-202ENST00000540128 RABGGTAQ92696 567 aa23.97■■□□□ 1.43
TRIM65-202ENST00000540128 TCF25Q9BQ70 676 aa23.97■■□□□ 1.43
TRIM65-202ENST00000540128 ZBP1Q9H171 429 aa23.97■■□□□ 1.43
TRIM65-202ENST00000540128 ZNF233A6NK53 670 aa23.96■■□□□ 1.43
TRIM65-202ENST00000540128 GOLGA6L22H0YM25 854 aa23.96■■□□□ 1.43
TRIM65-202ENST00000540128 XPOTO43592 962 aaKnown RBP23.96■■□□□ 1.43
TRIM65-202ENST00000540128 KIF4AO95239 1232 aa23.96■■□□□ 1.43
TRIM65-202ENST00000540128 SOD2P04179 222 aa23.96■■□□□ 1.43
TRIM65-202ENST00000540128 BMS1Q14692 1282 aaKnown RBP23.96■■□□□ 1.43
TRIM65-202ENST00000540128 COL19A1Q14993 1142 aa23.96■■□□□ 1.43
TRIM65-202ENST00000540128 NFIL3Q16649 462 aa23.96■■□□□ 1.43
TRIM65-202ENST00000540128 TCEAL5Q5H9L2 206 aa23.96■■□□□ 1.43
TRIM65-202ENST00000540128 SPATA1Q5VX52 437 aa23.96■■□□□ 1.43
TRIM65-202ENST00000540128 JADE1Q6IE81 842 aa23.96■■□□□ 1.43
TRIM65-202ENST00000540128 FUT10Q6P4F1 479 aa23.96■■□□□ 1.43
TRIM65-202ENST00000540128 TMC7Q7Z402 723 aa23.96■■□□□ 1.43
TRIM65-202ENST00000540128 MICAL1Q8TDZ2 1067 aa23.96■■□□□ 1.43
TRIM65-202ENST00000540128 FAM212AQ96EL1 285 aa23.96■■□□□ 1.43
TRIM65-202ENST00000540128 HERC2P3Q9BVR0 1158 aa23.96■■□□□ 1.43
TRIM65-202ENST00000540128 GPR62Q9BZJ7 368 aa23.96■■□□□ 1.43
TRIM65-202ENST00000540128 GOLGA2P5Q9HBQ8 144 aa23.96■■□□□ 1.43
TRIM65-202ENST00000540128 CHST7Q9NS84 486 aa23.96■■□□□ 1.43
TRIM65-202ENST00000540128 RBAKQ9NYW8 714 aaPredicted RBP23.96■■□□□ 1.43
TRIM65-202ENST00000540128 MAN1B1Q9UKM7 699 aa23.96■■□□□ 1.43
TRIM65-202ENST00000540128 LILRB3O75022 631 aa23.95■■□□□ 1.42
TRIM65-202ENST00000540128 B3GAT3O94766 335 aa23.95■■□□□ 1.42
TRIM65-202ENST00000540128 NFICP08651 508 aa23.95■■□□□ 1.42
TRIM65-202ENST00000540128 WNT7BP56706 349 aa23.95■■□□□ 1.42
TRIM65-202ENST00000540128 SMC1AQ14683 1233 aaKnown RBP23.95■■□□□ 1.42
TRIM65-202ENST00000540128 TMEM132DQ14C87 1099 aa23.95■■□□□ 1.42
TRIM65-202ENST00000540128 CCDC85BQ15834 202 aaPredicted RBP23.95■■□□□ 1.42
TRIM65-202ENST00000540128 TAS1R1Q7RTX1 841 aa23.95■■□□□ 1.42
TRIM65-202ENST00000540128 CBWD2Q8IUF1 395 aa23.95■■□□□ 1.42
TRIM65-202ENST00000540128 ENTPD7Q9NQZ7 604 aa23.95■■□□□ 1.42
TRIM65-202ENST00000540128 TUBGCP4Q9UGJ1 667 aa23.95■■□□□ 1.42
TRIM65-202ENST00000540128 MAPK8IP1Q9UQF2 711 aa23.95■■□□□ 1.42
TRIM65-202ENST00000540128 PCDHGC5Q9Y5F6 944 aa23.95■■□□□ 1.42
TRIM65-202ENST00000540128 PDCD11Q14690 1871 aaKnown RBP23.95■■□□□ 1.42
TRIM65-202ENST00000540128 SF3B1O75533 1304 aaKnown RBP eCLIP23.94■■□□□ 1.421e-6■■■■■ 126.6
TRIM65-202ENST00000540128 C2orf71A6NGG8 1288 aa23.94■■□□□ 1.42
TRIM65-202ENST00000540128 PODXLO00592 558 aa23.94■■□□□ 1.42
TRIM65-202ENST00000540128 NCK2O43639 380 aa23.94■■□□□ 1.42
TRIM65-202ENST00000540128 CXCL14O95715 111 aa23.94■■□□□ 1.42
TRIM65-202ENST00000540128 IGFBP6P24592 240 aaPredicted RBP23.94■■□□□ 1.42
TRIM65-202ENST00000540128 PRCPP42785 496 aa23.94■■□□□ 1.42
TRIM65-202ENST00000540128 ELAVL2Q12926 359 aaKnown RBP23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms