RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 FASTKD3Q14CZ7 662 aaKnown RBP14.84□□□□□ -0.03
SCNN1A-215ENST00000540037 TRAPPC3LQ5T215 181 aa14.84□□□□□ -0.03
SCNN1A-215ENST00000540037 SH3BP5LQ7L8J4 393 aa14.84□□□□□ -0.03
SCNN1A-215ENST00000540037 FBF1Q8TES7 1133 aa14.84□□□□□ -0.03
SCNN1A-215ENST00000540037 STRA6Q9BX79 667 aa14.84□□□□□ -0.03
SCNN1A-215ENST00000540037 DCLK3Q9C098 648 aa14.84□□□□□ -0.03
SCNN1A-215ENST00000540037 LRRC4BQ9NT99 713 aa14.84□□□□□ -0.03
SCNN1A-215ENST00000540037 HSPBP1Q9NZL4 362 aa14.84□□□□□ -0.03
SCNN1A-215ENST00000540037 ADGRA3Q8IWK6 1321 aa14.84□□□□□ -0.03
SCNN1A-215ENST00000540037 ZNFX1Q9P2E3 1918 aaKnown RBP14.83□□□□□ -0.03
SCNN1A-215ENST00000540037 A0A1W2PRG0 241 aa14.83□□□□□ -0.04
SCNN1A-215ENST00000540037 DPPA5A6NC42 116 aa14.83□□□□□ -0.04
SCNN1A-215ENST00000540037 POC1B-GALNT4F8VUJ3 575 aa14.83□□□□□ -0.04
SCNN1A-215ENST00000540037 RALAP11233 206 aa14.83□□□□□ -0.04
SCNN1A-215ENST00000540037 GCAP28676 217 aa14.83□□□□□ -0.04
SCNN1A-215ENST00000540037 PRELPP51888 382 aa14.83□□□□□ -0.04
SCNN1A-215ENST00000540037 STRN3Q13033 797 aa14.83□□□□□ -0.04
SCNN1A-215ENST00000540037 PTK6Q13882 451 aa14.83□□□□□ -0.04
SCNN1A-215ENST00000540037 ANO7Q6IWH7 933 aa14.83□□□□□ -0.04
SCNN1A-215ENST00000540037 FAM196AQ6ZSG2 479 aa14.83□□□□□ -0.04
SCNN1A-215ENST00000540037 CBWD2Q8IUF1 395 aa14.83□□□□□ -0.04
SCNN1A-215ENST00000540037 SAAL1Q96ER3 474 aa14.83□□□□□ -0.04
SCNN1A-215ENST00000540037 GTF3C4Q9UKN8 822 aa14.83□□□□□ -0.04
SCNN1A-215ENST00000540037 ZBTB21Q9ULJ3 1066 aa14.83□□□□□ -0.04
SCNN1A-215ENST00000540037 ARHGEF35A5YM69 484 aa14.83□□□□□ -0.04
SCNN1A-215ENST00000540037 CDH16O75309 829 aa14.83□□□□□ -0.04
SCNN1A-215ENST00000540037 GZMAP12544 262 aa14.83□□□□□ -0.04
SCNN1A-215ENST00000540037 MAPK4P31152 587 aa14.83□□□□□ -0.04
SCNN1A-215ENST00000540037 POLGP54098 1239 aaPredicted RBP14.83□□□□□ -0.04
SCNN1A-215ENST00000540037 GRIPAP1Q4V328 841 aa14.83□□□□□ -0.04
SCNN1A-215ENST00000540037 CCDC174Q6PII3 467 aa14.83□□□□□ -0.04
SCNN1A-215ENST00000540037 LONP2Q86WA8 852 aa14.83□□□□□ -0.04
SCNN1A-215ENST00000540037 CPA5Q8WXQ8 436 aa14.83□□□□□ -0.04
SCNN1A-215ENST00000540037 MKL1Q969V6 931 aa14.83□□□□□ -0.04
SCNN1A-215ENST00000540037 SLC7A6OSQ96CW6 309 aaPredicted RBP14.83□□□□□ -0.04
SCNN1A-215ENST00000540037 PI4K2AQ9BTU6 479 aa14.83□□□□□ -0.04
SCNN1A-215ENST00000540037 TRAIPQ9BWF2 469 aa14.83□□□□□ -0.04
SCNN1A-215ENST00000540037 TBC1D10AQ9BXI6 508 aa14.83□□□□□ -0.04
SCNN1A-215ENST00000540037 RNPEPL1Q9HAU8 725 aa14.83□□□□□ -0.04
SCNN1A-215ENST00000540037 KLHL11Q9NVR0 708 aa14.83□□□□□ -0.04
SCNN1A-215ENST00000540037 CORO1CQ9ULV4 474 aaPredicted RBP14.83□□□□□ -0.04
SCNN1A-215ENST00000540037 GREB1LQ9C091 1923 aaPredicted RBP14.82□□□□□ -0.04
SCNN1A-215ENST00000540037 SPDYE5A6NIY4 337 aa14.82□□□□□ -0.04
SCNN1A-215ENST00000540037 GRIN3BO60391 1043 aa14.82□□□□□ -0.04
SCNN1A-215ENST00000540037 TPBGLP0DKB5 382 aa14.82□□□□□ -0.04
SCNN1A-215ENST00000540037 INHBEP58166 350 aa14.82□□□□□ -0.04
SCNN1A-215ENST00000540037 CETN1Q12798 172 aa14.82□□□□□ -0.04
SCNN1A-215ENST00000540037 PKN2Q16513 984 aaKnown RBP14.82□□□□□ -0.04
SCNN1A-215ENST00000540037 SLC9A9Q8IVB4 645 aa14.82□□□□□ -0.04
SCNN1A-215ENST00000540037 SPDYE1Q8NFV5 336 aaPredicted RBP14.82□□□□□ -0.04
SCNN1A-215ENST00000540037 ZNF622Q969S3 477 aaKnown RBP eCLIP14.82□□□□□ -0.04
SCNN1A-215ENST00000540037 LRRC37BQ96QE4 947 aa14.82□□□□□ -0.04
SCNN1A-215ENST00000540037 NACC1Q96RE7 527 aa14.82□□□□□ -0.04
SCNN1A-215ENST00000540037 C12orf65Q9H3J6 166 aaKnown RBP14.82□□□□□ -0.04
SCNN1A-215ENST00000540037 GPRC5CQ9NQ84 441 aa14.82□□□□□ -0.04
SCNN1A-215ENST00000540037 SEL1LQ9UBV2 794 aa14.82□□□□□ -0.04
SCNN1A-215ENST00000540037 FAM47DPA6NHR8 397 aa14.82□□□□□ -0.04
SCNN1A-215ENST00000540037 A6NHS1 94 aa14.82□□□□□ -0.04
SCNN1A-215ENST00000540037 ASMTLO95671 621 aa14.82□□□□□ -0.04
SCNN1A-215ENST00000540037 ZSCAN5DPP0CG00 497 aa14.82□□□□□ -0.04
SCNN1A-215ENST00000540037 RFX1P22670 979 aa14.82□□□□□ -0.04
SCNN1A-215ENST00000540037 RPA3P35244 121 aaPredicted RBP14.82□□□□□ -0.04
SCNN1A-215ENST00000540037 PPP2R5CQ13362 524 aa14.82□□□□□ -0.04
SCNN1A-215ENST00000540037 CRY2Q49AN0 593 aa14.82□□□□□ -0.04
SCNN1A-215ENST00000540037 IZUMO3Q5VZ72 239 aa14.82□□□□□ -0.04
SCNN1A-215ENST00000540037 PADI6Q6TGC4 694 aa14.82□□□□□ -0.04
SCNN1A-215ENST00000540037 STXBP4Q6ZWJ1 553 aa14.82□□□□□ -0.04
SCNN1A-215ENST00000540037 MAML1Q92585 1016 aa14.82□□□□□ -0.04
SCNN1A-215ENST00000540037 SLCO2A1Q92959 643 aa14.82□□□□□ -0.04
SCNN1A-215ENST00000540037 NUDCD1Q96RS6 583 aa14.82□□□□□ -0.04
SCNN1A-215ENST00000540037 EURLQ9NYK6 297 aa14.82□□□□□ -0.04
SCNN1A-215ENST00000540037 NYAP2Q9P242 653 aa14.82□□□□□ -0.04
SCNN1A-215ENST00000540037 MROH7Q68CQ1 1323 aa14.82□□□□□ -0.04
SCNN1A-215ENST00000540037 RGL2O15211 777 aa14.82□□□□□ -0.04
SCNN1A-215ENST00000540037 CALB2P22676 271 aa14.82□□□□□ -0.04
SCNN1A-215ENST00000540037 CCNG1P51959 295 aa14.82□□□□□ -0.04
SCNN1A-215ENST00000540037 SESN3P58005 492 aa14.82□□□□□ -0.04
SCNN1A-215ENST00000540037 IRX1P78414 480 aaPredicted RBP14.82□□□□□ -0.04
SCNN1A-215ENST00000540037 IL9RQ01113 521 aa14.82□□□□□ -0.04
SCNN1A-215ENST00000540037 DDX1Q92499 740 aaKnown RBP14.82□□□□□ -0.04
SCNN1A-215ENST00000540037 CCDC17Q96LX7 622 aa14.82□□□□□ -0.04
SCNN1A-215ENST00000540037 ZNF577Q9BSK1 485 aa14.82□□□□□ -0.04
SCNN1A-215ENST00000540037 LRMDAQ9H2I8 198 aa14.82□□□□□ -0.04
SCNN1A-215ENST00000540037 ZFATQ9P243 1243 aa14.82□□□□□ -0.04
SCNN1A-215ENST00000540037 LGALS13Q9UHV8 139 aa14.82□□□□□ -0.04
SCNN1A-215ENST00000540037 PRR12Q9ULL5 1215 aa14.82□□□□□ -0.04
SCNN1A-215ENST00000540037 ETS1P14921 441 aa14.81□□□□□ -0.04
SCNN1A-215ENST00000540037 MKRN3Q13064 507 aaKnown RBP14.81□□□□□ -0.04
SCNN1A-215ENST00000540037 ACVR2BQ13705 512 aa14.81□□□□□ -0.04
SCNN1A-215ENST00000540037 MOGSQ13724 837 aa14.81□□□□□ -0.04
SCNN1A-215ENST00000540037 SLC1A5Q15758 541 aa14.81□□□□□ -0.04
SCNN1A-215ENST00000540037 SHC3Q92529 594 aa14.81□□□□□ -0.04
SCNN1A-215ENST00000540037 RBM15Q96T37 977 aaKnown RBP eCLIP14.81□□□□□ -0.04
SCNN1A-215ENST00000540037 PLCD4Q9BRC7 762 aa14.81□□□□□ -0.04
SCNN1A-215ENST00000540037 KIFC3Q9BVG8 833 aa14.81□□□□□ -0.04
SCNN1A-215ENST00000540037 TXLNGQ9NUQ3 528 aa14.81□□□□□ -0.04
SCNN1A-215ENST00000540037 C10orf71Q711Q0 1435 aa14.81□□□□□ -0.04
SCNN1A-215ENST00000540037 STRCQ7RTU9 1775 aa14.81□□□□□ -0.04
SCNN1A-215ENST00000540037 A0A1W2PPM1 405 aa14.81□□□□□ -0.04
SCNN1A-215ENST00000540037 BANF1O75531 89 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms