RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 STRN3Q13033 797 aa18.36■□□□□ 0.53
DDB1-215ENST00000539712 RSPO2Q6UXX9 243 aaPredicted RBP18.36■□□□□ 0.53
DDB1-215ENST00000539712 KREMEN2Q8NCW0 462 aa18.36■□□□□ 0.53
DDB1-215ENST00000539712 CLIC6Q96NY7 704 aa18.36■□□□□ 0.53
DDB1-215ENST00000539712 ACAP3Q96P50 834 aa18.36■□□□□ 0.53
DDB1-215ENST00000539712 SMOC2Q9H3U7 446 aa18.36■□□□□ 0.53
DDB1-215ENST00000539712 PLEKHA4Q9H4M7 779 aa18.36■□□□□ 0.53
DDB1-215ENST00000539712 TOPORSQ9NS56 1045 aaPredicted RBP18.36■□□□□ 0.53
DDB1-215ENST00000539712 LARSQ9P2J5 1176 aaKnown RBP18.36■□□□□ 0.53
DDB1-215ENST00000539712 LIMD1Q9UGP4 676 aa18.36■□□□□ 0.53
DDB1-215ENST00000539712 HCN4Q9Y3Q4 1203 aa18.36■□□□□ 0.53
DDB1-215ENST00000539712 SRPRBQ9Y5M8 271 aaKnown RBP18.36■□□□□ 0.53
DDB1-215ENST00000539712 FAM189A1O60320 539 aa18.35■□□□□ 0.53
DDB1-215ENST00000539712 ASGR2P07307 311 aa18.35■□□□□ 0.53
DDB1-215ENST00000539712 YARSP54577 528 aaKnown RBP18.35■□□□□ 0.53
DDB1-215ENST00000539712 SIGLEC14Q08ET2 396 aa18.35■□□□□ 0.53
DDB1-215ENST00000539712 ELAVL2Q12926 359 aaKnown RBP18.35■□□□□ 0.53
DDB1-215ENST00000539712 NOLC1Q14978 699 aaKnown RBP eCLIP18.35■□□□□ 0.533e-6■□□□□ 10.5
DDB1-215ENST00000539712 PSMD5Q16401 504 aa18.35■□□□□ 0.53
DDB1-215ENST00000539712 CYP26C1Q6V0L0 522 aa18.35■□□□□ 0.53
DDB1-215ENST00000539712 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.35■□□□□ 0.53
DDB1-215ENST00000539712 CEP57Q86XR8 500 aa18.35■□□□□ 0.53
DDB1-215ENST00000539712 SNX21Q969T3 373 aa18.35■□□□□ 0.53
DDB1-215ENST00000539712 C18orf25Q96B23 403 aaPredicted RBP18.35■□□□□ 0.53
DDB1-215ENST00000539712 UROC1Q96N76 676 aa18.35■□□□□ 0.53
DDB1-215ENST00000539712 USP28Q96RU2 1077 aa18.35■□□□□ 0.53
DDB1-215ENST00000539712 WDR6Q9NNW5 1121 aaKnown RBP18.35■□□□□ 0.53
DDB1-215ENST00000539712 ANKFY1Q9P2R3 1169 aa18.35■□□□□ 0.53
DDB1-215ENST00000539712 TBX20Q9UMR3 447 aa18.35■□□□□ 0.53
DDB1-215ENST00000539712 MORC2Q9Y6X9 1032 aaPredicted RBP18.35■□□□□ 0.53
DDB1-215ENST00000539712 I3L4J1 428 aa18.34■□□□□ 0.53
DDB1-215ENST00000539712 PIGRP01833 764 aa18.34■□□□□ 0.53
DDB1-215ENST00000539712 HARSP12081 509 aaKnown RBP18.34■□□□□ 0.53
DDB1-215ENST00000539712 PLA2G5P39877 138 aa18.34■□□□□ 0.53
DDB1-215ENST00000539712 BRCC3P46736 316 aa18.34■□□□□ 0.53
DDB1-215ENST00000539712 CREMQ03060 361 aa18.34■□□□□ 0.53
DDB1-215ENST00000539712 CEBPZQ03701 1054 aaKnown RBP18.34■□□□□ 0.53
DDB1-215ENST00000539712 TMEM130Q8N3G9 435 aa18.34■□□□□ 0.53
DDB1-215ENST00000539712 MYCT1Q8N699 235 aa18.34■□□□□ 0.53
DDB1-215ENST00000539712 TDRD5Q8NAT2 981 aaKnown RBP18.34■□□□□ 0.53
DDB1-215ENST00000539712 LARP4BQ92615 738 aaKnown RBP18.34■□□□□ 0.53
DDB1-215ENST00000539712 PARVGQ9HBI0 331 aa18.34■□□□□ 0.53
DDB1-215ENST00000539712 DPP7Q9UHL4 492 aa18.34■□□□□ 0.53
DDB1-215ENST00000539712 FBXW11Q9UKB1 542 aa18.34■□□□□ 0.53
DDB1-215ENST00000539712 CITO14578 2027 aa18.33■□□□□ 0.53
DDB1-215ENST00000539712 DOCK6Q96HP0 2047 aa18.33■□□□□ 0.53
DDB1-215ENST00000539712 SPDYE4A6NLX3 237 aa18.33■□□□□ 0.52
DDB1-215ENST00000539712 CLDN3O15551 220 aa18.33■□□□□ 0.52
DDB1-215ENST00000539712 STX6O43752 255 aa18.33■□□□□ 0.52
DDB1-215ENST00000539712 ZMYND10O75800 440 aa18.33■□□□□ 0.52
DDB1-215ENST00000539712 TKTP29401 623 aaKnown RBP18.33■□□□□ 0.52
DDB1-215ENST00000539712 SLC39A14Q15043 492 aa18.33■□□□□ 0.52
DDB1-215ENST00000539712 ZBTB41Q5SVQ8 909 aa18.33■□□□□ 0.52
DDB1-215ENST00000539712 SLC39A4Q6P5W5 647 aa18.33■□□□□ 0.52
DDB1-215ENST00000539712 CCDC149Q6ZUS6 474 aa18.33■□□□□ 0.52
DDB1-215ENST00000539712 PLCD3Q8N3E9 789 aa18.33■□□□□ 0.52
DDB1-215ENST00000539712 PBXIP1Q96AQ6 731 aa18.33■□□□□ 0.52
DDB1-215ENST00000539712 DDX27Q96GQ7 796 aaKnown RBP18.33■□□□□ 0.52
DDB1-215ENST00000539712 PRKD2Q9BZL6 878 aa18.33■□□□□ 0.52
DDB1-215ENST00000539712 SLC38A7Q9NVC3 462 aa18.33■□□□□ 0.52
DDB1-215ENST00000539712 ZDHHC7Q9NXF8 308 aa18.33■□□□□ 0.52
DDB1-215ENST00000539712 MTRRQ9UBK8 725 aa18.33■□□□□ 0.52
DDB1-215ENST00000539712 SORCS3Q9UPU3 1222 aa18.33■□□□□ 0.52
DDB1-215ENST00000539712 TTC26A0AVF1 554 aa18.32■□□□□ 0.52
DDB1-215ENST00000539712 H0YCG3 227 aa18.32■□□□□ 0.52
DDB1-215ENST00000539712 PODXLO00592 558 aa18.32■□□□□ 0.52
DDB1-215ENST00000539712 TRAK2O60296 914 aa18.32■□□□□ 0.52
DDB1-215ENST00000539712 FAM13AO94988 1023 aa18.32■□□□□ 0.52
DDB1-215ENST00000539712 NMT1P30419 496 aaKnown RBP18.32■□□□□ 0.52
DDB1-215ENST00000539712 TNFSF9P41273 254 aa18.32■□□□□ 0.52
DDB1-215ENST00000539712 GTF2BQ00403 316 aa18.32■□□□□ 0.52
DDB1-215ENST00000539712 RAB33AQ14088 237 aa18.32■□□□□ 0.52
DDB1-215ENST00000539712 ZBTB6Q15916 424 aa18.32■□□□□ 0.52
DDB1-215ENST00000539712 OTOP3Q7RTS5 596 aa18.32■□□□□ 0.52
DDB1-215ENST00000539712 SMG7Q92540 1137 aaKnown RBP18.32■□□□□ 0.52
DDB1-215ENST00000539712 MFSD14AQ96MC6 490 aa18.32■□□□□ 0.52
DDB1-215ENST00000539712 BACE2Q9Y5Z0 518 aa18.32■□□□□ 0.52
DDB1-215ENST00000539712 PIEZO1Q92508 2521 aa18.31■□□□□ 0.52
DDB1-215ENST00000539712 DOCK8Q8NF50 2099 aa18.31■□□□□ 0.52
DDB1-215ENST00000539712 A0A087X0B3 334 aa18.31■□□□□ 0.52
DDB1-215ENST00000539712 TBC1D4O60343 1298 aa18.31■□□□□ 0.52
DDB1-215ENST00000539712 PDGFBP01127 241 aaPredicted RBP18.31■□□□□ 0.52
DDB1-215ENST00000539712 ADRB2P07550 413 aa18.31■□□□□ 0.52
DDB1-215ENST00000539712 CLTAP09496 248 aa18.31■□□□□ 0.52
DDB1-215ENST00000539712 CXCL8P10145 99 aa18.31■□□□□ 0.52
DDB1-215ENST00000539712 SCP2P22307 547 aa18.31■□□□□ 0.52
DDB1-215ENST00000539712 RPL9P32969 192 aaKnown RBP18.31■□□□□ 0.52
DDB1-215ENST00000539712 OR1D2P34982 312 aa18.31■□□□□ 0.52
DDB1-215ENST00000539712 ZC2HC1CQ53FD0 456 aaPredicted RBP18.31■□□□□ 0.52
DDB1-215ENST00000539712 PDXDC1Q6P996 788 aa18.31■□□□□ 0.52
DDB1-215ENST00000539712 ELMSAN1Q6PJG2 1045 aa18.31■□□□□ 0.52
DDB1-215ENST00000539712 RASSF8Q8NHQ8 419 aa18.31■□□□□ 0.52
DDB1-215ENST00000539712 DNAJC19Q96DA6 116 aa18.31■□□□□ 0.52
DDB1-215ENST00000539712 MYADMQ96S97 322 aa18.31■□□□□ 0.52
DDB1-215ENST00000539712 ZSCAN16Q9H4T2 348 aaPredicted RBP18.31■□□□□ 0.52
DDB1-215ENST00000539712 TUBGCP4Q9UGJ1 667 aa18.31■□□□□ 0.52
DDB1-215ENST00000539712 PDCD11Q14690 1871 aaKnown RBP18.31■□□□□ 0.52
DDB1-215ENST00000539712 CLUHO75153 1309 aa18.3■□□□□ 0.52
DDB1-215ENST00000539712 A0A0B4J269 797 aa18.3■□□□□ 0.52
DDB1-215ENST00000539712 MYMKA6NI61 221 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms