RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 FAN1Q9Y2M0 1017 aa13.82□□□□□ -0.2
TSPAN9-207ENST00000539631 PRG3Q9Y2Y8 225 aaPredicted RBP13.82□□□□□ -0.2
TSPAN9-207ENST00000539631 CHD7Q9P2D1 2997 aa13.81□□□□□ -0.2
TSPAN9-207ENST00000539631 ZNF233A6NK53 670 aa13.81□□□□□ -0.2
TSPAN9-207ENST00000539631 F8W810 466 aa13.81□□□□□ -0.2
TSPAN9-207ENST00000539631 GRM6O15303 877 aa13.81□□□□□ -0.2
TSPAN9-207ENST00000539631 LPXNO60711 386 aa13.81□□□□□ -0.2
TSPAN9-207ENST00000539631 NR3C1P04150 777 aa13.81□□□□□ -0.2
TSPAN9-207ENST00000539631 POU5F1Q01860 360 aaKnown RBP13.81□□□□□ -0.2
TSPAN9-207ENST00000539631 ZBTB6Q15916 424 aa13.81□□□□□ -0.2
TSPAN9-207ENST00000539631 ZCWPW2Q504Y3 356 aa13.81□□□□□ -0.2
TSPAN9-207ENST00000539631 JADE1Q6IE81 842 aa13.81□□□□□ -0.2
TSPAN9-207ENST00000539631 CD302Q8IX05 232 aa13.81□□□□□ -0.2
TSPAN9-207ENST00000539631 TRIML1Q8N9V2 468 aa13.81□□□□□ -0.2
TSPAN9-207ENST00000539631 SPPL3Q8TCT6 385 aa13.81□□□□□ -0.2
TSPAN9-207ENST00000539631 FBXL18Q96ME1 805 aa13.81□□□□□ -0.2
TSPAN9-207ENST00000539631 CDX2Q99626 313 aaPredicted RBP13.81□□□□□ -0.2
TSPAN9-207ENST00000539631 ASB7Q9H672 318 aa13.81□□□□□ -0.2
TSPAN9-207ENST00000539631 KIAA1586Q9HCI6 787 aa13.81□□□□□ -0.2
TSPAN9-207ENST00000539631 MARCH5Q9NX47 278 aa13.81□□□□□ -0.2
TSPAN9-207ENST00000539631 TUBGCP4Q9UGJ1 667 aa13.81□□□□□ -0.2
TSPAN9-207ENST00000539631 TRIM49BA6NDI0 452 aa13.8□□□□□ -0.2
TSPAN9-207ENST00000539631 PPP1R3GB7ZBB8 358 aa13.8□□□□□ -0.2
TSPAN9-207ENST00000539631 EXOC3O60645 756 aa13.8□□□□□ -0.2
TSPAN9-207ENST00000539631 IL18RAPO95256 599 aa13.8□□□□□ -0.2
TSPAN9-207ENST00000539631 NFICP08651 508 aa13.8□□□□□ -0.2
TSPAN9-207ENST00000539631 DNAJB1P25685 340 aa13.8□□□□□ -0.2
TSPAN9-207ENST00000539631 PPM1AP35813 382 aa13.8□□□□□ -0.2
TSPAN9-207ENST00000539631 CLCNKBP51801 687 aa13.8□□□□□ -0.2
TSPAN9-207ENST00000539631 PMS1P54277 932 aaKnown RBP13.8□□□□□ -0.2
TSPAN9-207ENST00000539631 PLCB3Q01970 1234 aa13.8□□□□□ -0.2
TSPAN9-207ENST00000539631 STIM1Q13586 685 aa13.8□□□□□ -0.2
TSPAN9-207ENST00000539631 ADGRE1Q14246 886 aa13.8□□□□□ -0.2
TSPAN9-207ENST00000539631 SNRNP35Q16560 246 aaKnown RBP13.8□□□□□ -0.2
TSPAN9-207ENST00000539631 NFIL3Q16649 462 aa13.8□□□□□ -0.2
TSPAN9-207ENST00000539631 ANKRD40Q6AI12 368 aa13.8□□□□□ -0.2
TSPAN9-207ENST00000539631 CENPPQ6IPU0 288 aa13.8□□□□□ -0.2
TSPAN9-207ENST00000539631 KLHL10Q6JEL2 608 aa13.8□□□□□ -0.2
TSPAN9-207ENST00000539631 SLC9A9Q8IVB4 645 aa13.8□□□□□ -0.2
TSPAN9-207ENST00000539631 EFCAB13Q8IY85 973 aa13.8□□□□□ -0.2
TSPAN9-207ENST00000539631 POF1BQ8WVV4 589 aa13.8□□□□□ -0.2
TSPAN9-207ENST00000539631 IGSF21Q96ID5 467 aa13.8□□□□□ -0.2
TSPAN9-207ENST00000539631 PDE11AQ9HCR9 933 aa13.8□□□□□ -0.2
TSPAN9-207ENST00000539631 SLC38A7Q9NVC3 462 aa13.8□□□□□ -0.2
TSPAN9-207ENST00000539631 UBQLN1Q9UMX0 589 aaKnown RBP13.8□□□□□ -0.2
TSPAN9-207ENST00000539631 CARNS1A5YM72 827 aa13.79□□□□□ -0.2
TSPAN9-207ENST00000539631 CSPG5O95196 566 aa13.79□□□□□ -0.2
TSPAN9-207ENST00000539631 IGFBP4P22692 258 aa13.79□□□□□ -0.2
TSPAN9-207ENST00000539631 NR2F2P24468 414 aa13.79□□□□□ -0.2
TSPAN9-207ENST00000539631 IGFBP6P24592 240 aaPredicted RBP13.79□□□□□ -0.2
TSPAN9-207ENST00000539631 CCNE1P24864 410 aa13.79□□□□□ -0.2
TSPAN9-207ENST00000539631 PPP1R2P41236 205 aa13.79□□□□□ -0.2
TSPAN9-207ENST00000539631 CASP4P49662 377 aa13.79□□□□□ -0.2
TSPAN9-207ENST00000539631 GUCY2FP51841 1108 aa13.79□□□□□ -0.2
TSPAN9-207ENST00000539631 CYP24A1Q07973 514 aa13.79□□□□□ -0.2
TSPAN9-207ENST00000539631 MYBPC2Q14324 1141 aa13.79□□□□□ -0.2
TSPAN9-207ENST00000539631 HSP90AA2PQ14568 343 aaPredicted RBP13.79□□□□□ -0.2
TSPAN9-207ENST00000539631 TMEM132DQ14C87 1099 aa13.79□□□□□ -0.2
TSPAN9-207ENST00000539631 CCDC183Q5T5S1 534 aa13.79□□□□□ -0.2
TSPAN9-207ENST00000539631 CEP135Q66GS9 1140 aa13.79□□□□□ -0.2
TSPAN9-207ENST00000539631 RBM43Q6ZSC3 357 aaKnown RBP13.79□□□□□ -0.2
TSPAN9-207ENST00000539631 HASPINQ8TF76 798 aa13.79□□□□□ -0.2
TSPAN9-207ENST00000539631 TMEM174Q8WUU8 243 aa13.79□□□□□ -0.2
TSPAN9-207ENST00000539631 TMEM169Q96HH4 297 aa13.79□□□□□ -0.2
TSPAN9-207ENST00000539631 DHTKD1Q96HY7 919 aaPredicted RBP13.79□□□□□ -0.2
TSPAN9-207ENST00000539631 FAM84AQ96KN4 292 aa13.79□□□□□ -0.2
TSPAN9-207ENST00000539631 TSPAN18Q96SJ8 248 aa13.79□□□□□ -0.2
TSPAN9-207ENST00000539631 GAS2L1Q99501 681 aaPredicted RBP13.79□□□□□ -0.2
TSPAN9-207ENST00000539631 COLEC11Q9BWP8 271 aa13.79□□□□□ -0.2
TSPAN9-207ENST00000539631 TMEM63CQ9P1W3 806 aa13.79□□□□□ -0.2
TSPAN9-207ENST00000539631 CTNND2Q9UQB3 1225 aa13.79□□□□□ -0.2
TSPAN9-207ENST00000539631 DERAQ9Y315 318 aa13.79□□□□□ -0.2
TSPAN9-207ENST00000539631 PODXLO00592 558 aa13.78□□□□□ -0.2
TSPAN9-207ENST00000539631 PSMA7O14818 248 aa13.78□□□□□ -0.2
TSPAN9-207ENST00000539631 XPOTO43592 962 aaKnown RBP13.78□□□□□ -0.2
TSPAN9-207ENST00000539631 KIF4AO95239 1232 aa13.78□□□□□ -0.2
TSPAN9-207ENST00000539631 STX17P56962 302 aa13.78□□□□□ -0.2
TSPAN9-207ENST00000539631 NLRP12P59046 1061 aa13.78□□□□□ -0.2
TSPAN9-207ENST00000539631 KRT17Q04695 432 aa13.78□□□□□ -0.2
TSPAN9-207ENST00000539631 CAMK1Q14012 370 aa13.78□□□□□ -0.2
TSPAN9-207ENST00000539631 UPP1Q16831 310 aa13.78□□□□□ -0.2
TSPAN9-207ENST00000539631 EDRF1Q3B7T1 1238 aa13.78□□□□□ -0.2
TSPAN9-207ENST00000539631 SPATA1Q5VX52 437 aa13.78□□□□□ -0.2
TSPAN9-207ENST00000539631 LMBRD2Q68DH5 695 aaPredicted RBP13.78□□□□□ -0.2
TSPAN9-207ENST00000539631 CD300LGQ6UXG3 332 aa13.78□□□□□ -0.2
TSPAN9-207ENST00000539631 C3orf58Q8NDZ4 430 aa13.78□□□□□ -0.2
TSPAN9-207ENST00000539631 BEST2Q8NFU1 509 aa13.78□□□□□ -0.2
TSPAN9-207ENST00000539631 NELFBQ8WX92 580 aa13.78□□□□□ -0.2
TSPAN9-207ENST00000539631 MFSD14AQ96MC6 490 aa13.78□□□□□ -0.2
TSPAN9-207ENST00000539631 UROC1Q96N76 676 aa13.78□□□□□ -0.2
TSPAN9-207ENST00000539631 TSG101Q99816 390 aa13.78□□□□□ -0.2
TSPAN9-207ENST00000539631 VN1R3Q9BXE9 311 aa13.78□□□□□ -0.2
TSPAN9-207ENST00000539631 LMAN2LQ9H0V9 348 aa13.78□□□□□ -0.2
TSPAN9-207ENST00000539631 C2CD2Q9Y426 696 aa13.78□□□□□ -0.2
TSPAN9-207ENST00000539631 MTCH2Q9Y6C9 303 aa13.78□□□□□ -0.2
TSPAN9-207ENST00000539631 VWA8A3KMH1 1905 aa13.77□□□□□ -0.21
TSPAN9-207ENST00000539631 TADA2AO75478 443 aa13.77□□□□□ -0.21
TSPAN9-207ENST00000539631 AKAP3O75969 853 aa13.77□□□□□ -0.21
TSPAN9-207ENST00000539631 EFEMP2O95967 443 aa13.77□□□□□ -0.21
TSPAN9-207ENST00000539631 CYP3A5P20815 502 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms