RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 CYP1A2P05177 515 aa21.65■■□□□ 1.06
TMEM260-203ENST00000539559 SSTR3P32745 418 aaPredicted RBP21.65■■□□□ 1.06
TMEM260-203ENST00000539559 GJC1P36383 396 aa21.65■■□□□ 1.06
TMEM260-203ENST00000539559 CYP4F22Q6NT55 531 aa21.65■■□□□ 1.06
TMEM260-203ENST00000539559 ECHDC2Q86YB7 292 aa21.65■■□□□ 1.06
TMEM260-203ENST00000539559 TEX2Q8IWB9 1127 aa21.65■■□□□ 1.06
TMEM260-203ENST00000539559 ACER1Q8TDN7 264 aa21.65■■□□□ 1.06
TMEM260-203ENST00000539559 GMCL1Q96IK5 515 aa21.65■■□□□ 1.06
TMEM260-203ENST00000539559 KIFC3Q9BVG8 833 aa21.65■■□□□ 1.06
TMEM260-203ENST00000539559 NOP53Q9NZM5 478 aaKnown RBP21.65■■□□□ 1.06
TMEM260-203ENST00000539559 ADAM22Q9P0K1 906 aa21.65■■□□□ 1.06
TMEM260-203ENST00000539559 NAALADL1Q9UQQ1 740 aa21.65■■□□□ 1.06
TMEM260-203ENST00000539559 UPP2O95045 317 aa21.65■■□□□ 1.06
TMEM260-203ENST00000539559 FMNL3Q8IVF7 1028 aa21.65■■□□□ 1.06
TMEM260-203ENST00000539559 PI4K2AQ9BTU6 479 aa21.65■■□□□ 1.06
TMEM260-203ENST00000539559 ARHGEF3Q9NR81 526 aa21.65■■□□□ 1.06
TMEM260-203ENST00000539559 UBE4BO95155 1302 aa21.65■■□□□ 1.06
TMEM260-203ENST00000539559 SLC16A4O15374 487 aa21.64■■□□□ 1.06
TMEM260-203ENST00000539559 GJB6O95452 261 aa21.64■■□□□ 1.06
TMEM260-203ENST00000539559 ALADP13716 330 aa21.64■■□□□ 1.06
TMEM260-203ENST00000539559 RFX1P22670 979 aa21.64■■□□□ 1.06
TMEM260-203ENST00000539559 TATDN1Q6P1N9 297 aa21.64■■□□□ 1.06
TMEM260-203ENST00000539559 BZW1Q7L1Q6 419 aaKnown RBP21.64■■□□□ 1.06
TMEM260-203ENST00000539559 XXYLT1Q8NBI6 393 aa21.64■■□□□ 1.06
TMEM260-203ENST00000539559 GMCL1P1Q8NEA9 526 aa21.64■■□□□ 1.06
TMEM260-203ENST00000539559 MRRFQ96E11 262 aaKnown RBP21.64■■□□□ 1.06
TMEM260-203ENST00000539559 SNF8Q96H20 258 aa21.64■■□□□ 1.06
TMEM260-203ENST00000539559 TMEM237Q96Q45 408 aa21.64■■□□□ 1.06
TMEM260-203ENST00000539559 WHRNQ9P202 907 aa21.64■■□□□ 1.06
TMEM260-203ENST00000539559 ANAPC5Q9UJX4 755 aa21.64■■□□□ 1.06
TMEM260-203ENST00000539559 IPO5O00410 1097 aaKnown RBP21.64■■□□□ 1.05
TMEM260-203ENST00000539559 FSCN2O14926 492 aa21.64■■□□□ 1.05
TMEM260-203ENST00000539559 CAPN12Q6ZSI9 719 aa21.64■■□□□ 1.05
TMEM260-203ENST00000539559 C12orf50Q8NA57 414 aaPredicted RBP21.64■■□□□ 1.05
TMEM260-203ENST00000539559 TDRD3Q9H7E2 651 aaKnown RBP21.64■■□□□ 1.05
TMEM260-203ENST00000539559 ETNK1Q9HBU6 452 aa21.64■■□□□ 1.05
TMEM260-203ENST00000539559 RXFP1Q9HBX9 757 aa21.64■■□□□ 1.05
TMEM260-203ENST00000539559 PRKAG3Q9UGI9 489 aa21.64■■□□□ 1.05
TMEM260-203ENST00000539559 ZNF646O15015 1829 aaPredicted RBP21.63■■□□□ 1.05
TMEM260-203ENST00000539559 MTA2O94776 668 aa21.63■■□□□ 1.05
TMEM260-203ENST00000539559 POLR2MP0CAP2 368 aa21.63■■□□□ 1.05
TMEM260-203ENST00000539559 GZMAP12544 262 aa21.63■■□□□ 1.05
TMEM260-203ENST00000539559 DPEP1P16444 411 aa21.63■■□□□ 1.05
TMEM260-203ENST00000539559 RRM1P23921 792 aa21.63■■□□□ 1.05
TMEM260-203ENST00000539559 TMED2Q15363 201 aa21.63■■□□□ 1.05
TMEM260-203ENST00000539559 TMEM63BQ5T3F8 832 aa21.63■■□□□ 1.05
TMEM260-203ENST00000539559 GTF3C4Q9UKN8 822 aa21.63■■□□□ 1.05
TMEM260-203ENST00000539559 PIK3CDO00329 1044 aa21.63■■□□□ 1.05
TMEM260-203ENST00000539559 KRT5P13647 590 aa21.63■■□□□ 1.05
TMEM260-203ENST00000539559 ATF2P15336 505 aa21.63■■□□□ 1.05
TMEM260-203ENST00000539559 MAPK4P31152 587 aa21.63■■□□□ 1.05
TMEM260-203ENST00000539559 TCEAL1Q15170 157 aa21.63■■□□□ 1.05
TMEM260-203ENST00000539559 CPA5Q8WXQ8 436 aa21.63■■□□□ 1.05
TMEM260-203ENST00000539559 FAM167BQ9BTA0 163 aa21.63■■□□□ 1.05
TMEM260-203ENST00000539559 KIF9Q9HAQ2 790 aa21.63■■□□□ 1.05
TMEM260-203ENST00000539559 ZNFX1Q9P2E3 1918 aaKnown RBP21.63■■□□□ 1.05
TMEM260-203ENST00000539559 ASRGL1Q7L266 308 aa21.63■■□□□ 1.05
TMEM260-203ENST00000539559 LARGE2Q8N3Y3 721 aa21.63■■□□□ 1.05
TMEM260-203ENST00000539559 TAS1R2Q8TE23 839 aa21.63■■□□□ 1.05
TMEM260-203ENST00000539559 UTP4Q969X6 686 aaKnown RBP21.63■■□□□ 1.05
TMEM260-203ENST00000539559 ITIH2P19823 946 aa21.62■■□□□ 1.05
TMEM260-203ENST00000539559 TAC1P20366 129 aa21.62■■□□□ 1.05
TMEM260-203ENST00000539559 KCNA3P22001 575 aa21.62■■□□□ 1.05
TMEM260-203ENST00000539559 STAT2P52630 851 aa21.62■■□□□ 1.05
TMEM260-203ENST00000539559 PEX3P56589 373 aa21.62■■□□□ 1.05
TMEM260-203ENST00000539559 TEKT3Q9BXF9 490 aa21.62■■□□□ 1.05
TMEM260-203ENST00000539559 SLCO1B3Q9NPD5 702 aa21.62■■□□□ 1.05
TMEM260-203ENST00000539559 KLHL14Q9P2G3 628 aa21.62■■□□□ 1.05
TMEM260-203ENST00000539559 LARSQ9P2J5 1176 aaKnown RBP21.62■■□□□ 1.05
TMEM260-203ENST00000539559 NKX1-2Q9UD57 310 aaPredicted RBP21.62■■□□□ 1.05
TMEM260-203ENST00000539559 ENTPD3O75355 529 aa21.62■■□□□ 1.05
TMEM260-203ENST00000539559 WDR4P57081 412 aaKnown RBP21.62■■□□□ 1.05
TMEM260-203ENST00000539559 DNAJC3Q13217 504 aa21.62■■□□□ 1.05
TMEM260-203ENST00000539559 HAUS6Q7Z4H7 955 aa21.62■■□□□ 1.05
TMEM260-203ENST00000539559 SHC3Q92529 594 aa21.62■■□□□ 1.05
TMEM260-203ENST00000539559 PRMT6Q96LA8 375 aaPredicted RBP21.62■■□□□ 1.05
TMEM260-203ENST00000539559 ACCSQ96QU6 501 aa21.62■■□□□ 1.05
TMEM260-203ENST00000539559 TRIM6Q9C030 488 aaPredicted RBP21.62■■□□□ 1.05
TMEM260-203ENST00000539559 DCLK3Q9C098 648 aa21.62■■□□□ 1.05
TMEM260-203ENST00000539559 KLHL11Q9NVR0 708 aa21.62■■□□□ 1.05
TMEM260-203ENST00000539559 GSTTP1A0A1W2PQM5 241 aa21.61■■□□□ 1.05
TMEM260-203ENST00000539559 CDR2Q01850 454 aa21.61■■□□□ 1.05
TMEM260-203ENST00000539559 RSBN1LQ6PCB5 846 aaPredicted RBP21.61■■□□□ 1.05
TMEM260-203ENST00000539559 ANKS1BQ7Z6G8 1248 aa21.61■■□□□ 1.05
TMEM260-203ENST00000539559 PITPNM3Q9BZ71 974 aa21.61■■□□□ 1.05
TMEM260-203ENST00000539559 MYLK2Q9H1R3 596 aa21.61■■□□□ 1.05
TMEM260-203ENST00000539559 NKIRAS1Q9NYS0 192 aa21.61■■□□□ 1.05
TMEM260-203ENST00000539559 RALAP11233 206 aa21.61■■□□□ 1.05
TMEM260-203ENST00000539559 TARSP26639 723 aaKnown RBP21.61■■□□□ 1.05
TMEM260-203ENST00000539559 CCHCR1Q8TD31 782 aa21.61■■□□□ 1.05
TMEM260-203ENST00000539559 HELQQ8TDG4 1101 aa21.61■■□□□ 1.05
TMEM260-203ENST00000539559 WDR11Q9BZH6 1224 aa21.61■■□□□ 1.05
TMEM260-203ENST00000539559 FBXO28Q9NVF7 368 aa21.61■■□□□ 1.05
TMEM260-203ENST00000539559 RBBP6Q7Z6E9 1792 aaKnown RBP21.6■■□□□ 1.05
TMEM260-203ENST00000539559 RASA4BC9J798 803 aa21.6■■□□□ 1.05
TMEM260-203ENST00000539559 RASA4O43374 803 aa21.6■■□□□ 1.05
TMEM260-203ENST00000539559 GRIN3BO60391 1043 aa21.6■■□□□ 1.05
TMEM260-203ENST00000539559 ITGB5P18084 799 aa21.6■■□□□ 1.05
TMEM260-203ENST00000539559 CCND1P24385 295 aa21.6■■□□□ 1.05
TMEM260-203ENST00000539559 MFAP3P55082 362 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms