RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 OTUD7BQ6GQQ9 843 aa8.33□□□□□ -1.08
TRAV11-201ENST00000539512 OVCH2Q7RTZ1 564 aa8.33□□□□□ -1.08
TRAV11-201ENST00000539512 BRIX1Q8TDN6 353 aaKnown RBP8.33□□□□□ -1.08
TRAV11-201ENST00000539512 PNPOQ9NVS9 261 aa8.33□□□□□ -1.08
TRAV11-201ENST00000539512 SH3BP1Q9Y3L3 701 aa8.33□□□□□ -1.08
TRAV11-201ENST00000539512 TBKBP1A7MCY6 615 aa8.32□□□□□ -1.08
TRAV11-201ENST00000539512 GRM6O15303 877 aa8.32□□□□□ -1.08
TRAV11-201ENST00000539512 GPR42O15529 346 aa8.32□□□□□ -1.08
TRAV11-201ENST00000539512 FOXS1O43638 330 aa8.32□□□□□ -1.08
TRAV11-201ENST00000539512 POMCP01189 267 aa8.32□□□□□ -1.08
TRAV11-201ENST00000539512 GPSM2P81274 684 aa8.32□□□□□ -1.08
TRAV11-201ENST00000539512 DUSP8Q13202 625 aa8.32□□□□□ -1.08
TRAV11-201ENST00000539512 KIAA0753Q2KHM9 967 aa8.32□□□□□ -1.08
TRAV11-201ENST00000539512 FLYWCH1Q4VC44 716 aa8.32□□□□□ -1.08
TRAV11-201ENST00000539512 ATXN7L2Q5T6C5 722 aaPredicted RBP8.32□□□□□ -1.08
TRAV11-201ENST00000539512 DARS2Q6PI48 645 aaKnown RBP8.32□□□□□ -1.08
TRAV11-201ENST00000539512 NPNTQ6UXI9 565 aa8.32□□□□□ -1.08
TRAV11-201ENST00000539512 SEM1Q6ZVN7 128 aa8.32□□□□□ -1.08
TRAV11-201ENST00000539512 MIEF2Q96C03 454 aa8.32□□□□□ -1.08
TRAV11-201ENST00000539512 BDH2Q9BUT1 245 aa8.32□□□□□ -1.08
TRAV11-201ENST00000539512 RTEL1Q9NZ71 1219 aa8.32□□□□□ -1.08
TRAV11-201ENST00000539512 ATRNL1Q5VV63 1379 aa8.32□□□□□ -1.08
TRAV11-201ENST00000539512 MGEA5O60502 916 aa8.31□□□□□ -1.08
TRAV11-201ENST00000539512 ZBED1O96006 694 aa8.31□□□□□ -1.08
TRAV11-201ENST00000539512 AMHP03971 560 aa8.31□□□□□ -1.08
TRAV11-201ENST00000539512 TYRP14679 529 aa8.31□□□□□ -1.08
TRAV11-201ENST00000539512 FAM193AP78312 1265 aa8.31□□□□□ -1.08
TRAV11-201ENST00000539512 PURAQ00577 322 aaKnown RBP8.31□□□□□ -1.08
TRAV11-201ENST00000539512 SNAPC2Q13487 334 aa8.31□□□□□ -1.08
TRAV11-201ENST00000539512 BMT2Q1RMZ1 405 aa8.31□□□□□ -1.08
TRAV11-201ENST00000539512 ANKS6Q68DC2 871 aa8.31□□□□□ -1.08
TRAV11-201ENST00000539512 UBE3BQ7Z3V4 1068 aa8.31□□□□□ -1.08
TRAV11-201ENST00000539512 CHST13Q8NET6 341 aa8.31□□□□□ -1.08
TRAV11-201ENST00000539512 SLC35B2Q8TB61 432 aa8.31□□□□□ -1.08
TRAV11-201ENST00000539512 ATXN2LQ8WWM7 1075 aaKnown RBP8.31□□□□□ -1.08
TRAV11-201ENST00000539512 LOXL4Q96JB6 756 aa8.31□□□□□ -1.08
TRAV11-201ENST00000539512 REXO4Q9GZR2 422 aaKnown RBP8.31□□□□□ -1.08
TRAV11-201ENST00000539512 DEF6Q9H4E7 631 aa8.31□□□□□ -1.08
TRAV11-201ENST00000539512 SLAMF7Q9NQ25 335 aa8.31□□□□□ -1.08
TRAV11-201ENST00000539512 CPA4Q9UI42 421 aa8.31□□□□□ -1.08
TRAV11-201ENST00000539512 TCAF1Q9Y4C2 921 aa8.31□□□□□ -1.08
TRAV11-201ENST00000539512 CCDC194A0A1B0GVG4 234 aa8.3□□□□□ -1.08
TRAV11-201ENST00000539512 A0A1W2PPL8 197 aa8.3□□□□□ -1.08
TRAV11-201ENST00000539512 TCRBV7S2A1N4TA0A589 114 aa8.3□□□□□ -1.08
TRAV11-201ENST00000539512 CFAP69A5D8W1 941 aa8.3□□□□□ -1.08
TRAV11-201ENST00000539512 TPP1O14773 563 aa8.3□□□□□ -1.08
TRAV11-201ENST00000539512 HK1P19367 917 aa8.3□□□□□ -1.08
TRAV11-201ENST00000539512 HOXA5P20719 270 aa8.3□□□□□ -1.08
TRAV11-201ENST00000539512 RAB1AP62820 205 aa8.3□□□□□ -1.08
TRAV11-201ENST00000539512 CRHR2Q13324 411 aa8.3□□□□□ -1.08
TRAV11-201ENST00000539512 HDAC1Q13547 482 aaPredicted RBP8.3□□□□□ -1.08
TRAV11-201ENST00000539512 COBLL1Q53SF7 1204 aa8.3□□□□□ -1.08
TRAV11-201ENST00000539512 DACT2Q5SW24 774 aa8.3□□□□□ -1.08
TRAV11-201ENST00000539512 CHST15Q7LFX5 561 aaPredicted RBP8.3□□□□□ -1.08
TRAV11-201ENST00000539512 MDGA1Q8NFP4 955 aa8.3□□□□□ -1.08
TRAV11-201ENST00000539512 DMRTA2Q96SC8 542 aa8.3□□□□□ -1.08
TRAV11-201ENST00000539512 KCNH6Q9H252 994 aa8.3□□□□□ -1.08
TRAV11-201ENST00000539512 SIDT1Q9NXL6 827 aaKnown RBP8.3□□□□□ -1.08
TRAV11-201ENST00000539512 FAM50BQ9Y247 325 aa8.3□□□□□ -1.08
TRAV11-201ENST00000539512 ZNF623O75123 536 aa8.29□□□□□ -1.08
TRAV11-201ENST00000539512 HAUS5O94927 633 aa8.29□□□□□ -1.08
TRAV11-201ENST00000539512 ITGB3P05106 788 aa8.29□□□□□ -1.08
TRAV11-201ENST00000539512 RHCEP18577 417 aa8.29□□□□□ -1.08
TRAV11-201ENST00000539512 PIK3CGP48736 1102 aa8.29□□□□□ -1.08
TRAV11-201ENST00000539512 RHDQ02161 417 aa8.29□□□□□ -1.08
TRAV11-201ENST00000539512 PLP2Q04941 152 aa8.29□□□□□ -1.08
TRAV11-201ENST00000539512 PLS1Q14651 629 aa8.29□□□□□ -1.08
TRAV11-201ENST00000539512 RNF220Q5VTB9 566 aa8.29□□□□□ -1.08
TRAV11-201ENST00000539512 RNF169Q8NCN4 708 aa8.29□□□□□ -1.08
TRAV11-201ENST00000539512 FAM156AQ8NDB6 213 aa8.29□□□□□ -1.08
TRAV11-201ENST00000539512 TNPO1Q92973 898 aaKnown RBP8.29□□□□□ -1.08
TRAV11-201ENST00000539512 PHACTR3Q96KR7 559 aa8.29□□□□□ -1.08
TRAV11-201ENST00000539512 MYOCQ99972 504 aa8.29□□□□□ -1.08
TRAV11-201ENST00000539512 SARGQ9BW04 601 aa8.29□□□□□ -1.08
TRAV11-201ENST00000539512 ARNT2Q9HBZ2 717 aa8.29□□□□□ -1.08
TRAV11-201ENST00000539512 STAP2Q9UGK3 403 aa8.29□□□□□ -1.08
TRAV11-201ENST00000539512 PCDHA1Q9Y5I3 950 aa8.29□□□□□ -1.08
TRAV11-201ENST00000539512 A0A088AWK7 358 aa8.28□□□□□ -1.08
TRAV11-201ENST00000539512 GOLGA6L6A8MZA4 724 aa8.28□□□□□ -1.08
TRAV11-201ENST00000539512 K7ESM1 405 aa8.28□□□□□ -1.08
TRAV11-201ENST00000539512 F2RL2O00254 374 aa8.28□□□□□ -1.08
TRAV11-201ENST00000539512 GOLIM4O00461 696 aa8.28□□□□□ -1.08
TRAV11-201ENST00000539512 TRIM27P14373 513 aa8.28□□□□□ -1.08
TRAV11-201ENST00000539512 ACO1P21399 889 aaKnown RBP8.28□□□□□ -1.08
TRAV11-201ENST00000539512 AGFG1P52594 562 aaKnown RBP8.28□□□□□ -1.08
TRAV11-201ENST00000539512 NKX6-1P78426 367 aaPredicted RBP8.28□□□□□ -1.08
TRAV11-201ENST00000539512 CNGB1Q14028 1251 aaPredicted RBP8.28□□□□□ -1.08
TRAV11-201ENST00000539512 CNN3Q15417 329 aaKnown RBP8.28□□□□□ -1.08
TRAV11-201ENST00000539512 SAFBQ15424 915 aaKnown RBP eCLIP8.28□□□□□ -1.08
TRAV11-201ENST00000539512 DCAF17Q5H9S7 520 aaPredicted RBP8.28□□□□□ -1.08
TRAV11-201ENST00000539512 KHDC1LQ5JSQ8 128 aa8.28□□□□□ -1.08
TRAV11-201ENST00000539512 METTL24Q5JXM2 366 aa8.28□□□□□ -1.08
TRAV11-201ENST00000539512 KIAA0319LQ8IZA0 1049 aa8.28□□□□□ -1.08
TRAV11-201ENST00000539512 OR10H5Q8NGA6 315 aa8.28□□□□□ -1.08
TRAV11-201ENST00000539512 LRFN3Q9BTN0 628 aa8.28□□□□□ -1.08
TRAV11-201ENST00000539512 LSM14BQ9BX40 385 aaKnown RBP8.28□□□□□ -1.08
TRAV11-201ENST00000539512 BRD9Q9H8M2 597 aa8.28□□□□□ -1.08
TRAV11-201ENST00000539512 CFAP97Q9P2B7 532 aa8.28□□□□□ -1.08
TRAV11-201ENST00000539512 SLC23A1Q9UHI7 598 aa8.28□□□□□ -1.08
TRAV11-201ENST00000539512 PATE3B3GLJ2 98 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms