RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 DRP2Q13474 957 aa13.44□□□□□ -0.26
SFSWAP-208ENST00000539506 XKR9Q5GH70 373 aa13.44□□□□□ -0.26
SFSWAP-208ENST00000539506 HOOK3Q86VS8 718 aa13.44□□□□□ -0.26
SFSWAP-208ENST00000539506 RHOT2Q8IXI1 618 aa13.44□□□□□ -0.26
SFSWAP-208ENST00000539506 RMDN3Q96TC7 470 aa13.44□□□□□ -0.26
SFSWAP-208ENST00000539506 ZSWIM1Q9BR11 485 aa13.44□□□□□ -0.26
SFSWAP-208ENST00000539506 PDCD2LQ9BRP1 358 aa13.44□□□□□ -0.26
SFSWAP-208ENST00000539506 ZNRF3Q9ULT6 936 aa13.44□□□□□ -0.26
SFSWAP-208ENST00000539506 TNS1Q9HBL0 1735 aaKnown RBP13.43□□□□□ -0.26
SFSWAP-208ENST00000539506 WDR46O15213 610 aaKnown RBP13.43□□□□□ -0.26
SFSWAP-208ENST00000539506 ZNF862O60290 1169 aa13.43□□□□□ -0.26
SFSWAP-208ENST00000539506 GRIN3BO60391 1043 aa13.43□□□□□ -0.26
SFSWAP-208ENST00000539506 PIAS1O75925 651 aa13.43□□□□□ -0.26
SFSWAP-208ENST00000539506 TCEAL1Q15170 157 aa13.43□□□□□ -0.26
SFSWAP-208ENST00000539506 C11orf63Q6NUN7 778 aa13.43□□□□□ -0.26
SFSWAP-208ENST00000539506 CCDC137Q6PK04 289 aaKnown RBP13.43□□□□□ -0.26
SFSWAP-208ENST00000539506 TAS1R2Q8TE23 839 aa13.43□□□□□ -0.26
SFSWAP-208ENST00000539506 PARD3BQ8TEW8 1205 aa13.43□□□□□ -0.26
SFSWAP-208ENST00000539506 RAB17Q9H0T7 212 aa13.43□□□□□ -0.26
SFSWAP-208ENST00000539506 MYOZ2Q9NPC6 264 aa13.43□□□□□ -0.26
SFSWAP-208ENST00000539506 PXMP2Q9NR77 195 aa13.43□□□□□ -0.26
SFSWAP-208ENST00000539506 GRHL1Q9NZI5 618 aa13.43□□□□□ -0.26
SFSWAP-208ENST00000539506 TRPC6Q9Y210 931 aa13.43□□□□□ -0.26
SFSWAP-208ENST00000539506 USP20Q9Y2K6 914 aa13.43□□□□□ -0.26
SFSWAP-208ENST00000539506 LOXHD1Q8IVV2 1947 aa13.43□□□□□ -0.26
SFSWAP-208ENST00000539506 TESPA1A2RU30 521 aaPredicted RBP13.43□□□□□ -0.26
SFSWAP-208ENST00000539506 EME2A4GXA9 379 aaPredicted RBP13.43□□□□□ -0.26
SFSWAP-208ENST00000539506 CCDC169A6NNP5 214 aa13.43□□□□□ -0.26
SFSWAP-208ENST00000539506 H0Y3Z8 333 aa13.43□□□□□ -0.26
SFSWAP-208ENST00000539506 RTN2O75298 545 aa13.43□□□□□ -0.26
SFSWAP-208ENST00000539506 DLATP10515 647 aaKnown RBP13.43□□□□□ -0.26
SFSWAP-208ENST00000539506 MTMR2Q13614 643 aa13.43□□□□□ -0.26
SFSWAP-208ENST00000539506 TMEM132AQ24JP5 1023 aa13.43□□□□□ -0.26
SFSWAP-208ENST00000539506 LACTB2Q53H82 288 aaPredicted RBP13.43□□□□□ -0.26
SFSWAP-208ENST00000539506 TLDC1Q6P9B6 456 aa13.43□□□□□ -0.26
SFSWAP-208ENST00000539506 EXOC3L1Q86VI1 746 aa13.43□□□□□ -0.26
SFSWAP-208ENST00000539506 MCF2L2Q86YR7 1114 aa13.43□□□□□ -0.26
SFSWAP-208ENST00000539506 AGBL3Q8NEM8 1001 aa13.43□□□□□ -0.26
SFSWAP-208ENST00000539506 DDX1Q92499 740 aaKnown RBP13.43□□□□□ -0.26
SFSWAP-208ENST00000539506 SHC3Q92529 594 aa13.43□□□□□ -0.26
SFSWAP-208ENST00000539506 RSRC1Q96IZ7 334 aaKnown RBP13.43□□□□□ -0.26
SFSWAP-208ENST00000539506 KIF9Q9HAQ2 790 aa13.43□□□□□ -0.26
SFSWAP-208ENST00000539506 TBC1D22BQ9NU19 505 aa13.43□□□□□ -0.26
SFSWAP-208ENST00000539506 DIS3Q9Y2L1 958 aaKnown RBP13.43□□□□□ -0.26
SFSWAP-208ENST00000539506 GOLGA6L10A0A0M3HER8 536 aa13.42□□□□□ -0.26
SFSWAP-208ENST00000539506 A0A1B0GUA9 196 aa13.42□□□□□ -0.26
SFSWAP-208ENST00000539506 STBD1O95210 358 aa13.42□□□□□ -0.26
SFSWAP-208ENST00000539506 SSTR3P32745 418 aaPredicted RBP13.42□□□□□ -0.26
SFSWAP-208ENST00000539506 PSMC5P62195 406 aa13.42□□□□□ -0.26
SFSWAP-208ENST00000539506 MTM1Q13496 603 aa13.42□□□□□ -0.26
SFSWAP-208ENST00000539506 ALCAMQ13740 583 aa13.42□□□□□ -0.26
SFSWAP-208ENST00000539506 RMDN2Q96LZ7 410 aa13.42□□□□□ -0.26
SFSWAP-208ENST00000539506 PI4K2AQ9BTU6 479 aa13.42□□□□□ -0.26
SFSWAP-208ENST00000539506 KIAA1683Q9H0B3 1180 aa13.42□□□□□ -0.26
SFSWAP-208ENST00000539506 FZD1Q9UP38 647 aa13.42□□□□□ -0.26
SFSWAP-208ENST00000539506 TMEM120BA0PK00 339 aa13.42□□□□□ -0.26
SFSWAP-208ENST00000539506 CCDC189A1A4V9 331 aa13.42□□□□□ -0.26
SFSWAP-208ENST00000539506 RGS20O76081 388 aa13.42□□□□□ -0.26
SFSWAP-208ENST00000539506 RARAP10276 462 aa13.42□□□□□ -0.26
SFSWAP-208ENST00000539506 CYP11B1P15538 503 aa13.42□□□□□ -0.26
SFSWAP-208ENST00000539506 CTNNA2P26232 953 aa13.42□□□□□ -0.26
SFSWAP-208ENST00000539506 SLC8A1P32418 973 aa13.42□□□□□ -0.26
SFSWAP-208ENST00000539506 CHKAP35790 457 aa13.42□□□□□ -0.26
SFSWAP-208ENST00000539506 MMP13P45452 471 aa13.42□□□□□ -0.26
SFSWAP-208ENST00000539506 NCALDP61601 193 aa13.42□□□□□ -0.26
SFSWAP-208ENST00000539506 AUHQ13825 339 aaKnown RBP13.42□□□□□ -0.26
SFSWAP-208ENST00000539506 MPP2Q14168 576 aa13.42□□□□□ -0.26
SFSWAP-208ENST00000539506 SIX1Q15475 284 aaPredicted RBP13.42□□□□□ -0.26
SFSWAP-208ENST00000539506 KYNUQ16719 465 aa13.42□□□□□ -0.26
SFSWAP-208ENST00000539506 ZNF570Q96NI8 536 aa13.42□□□□□ -0.26
SFSWAP-208ENST00000539506 TMEM237Q96Q45 408 aa13.42□□□□□ -0.26
SFSWAP-208ENST00000539506 TRIM6Q9C030 488 aaPredicted RBP13.42□□□□□ -0.26
SFSWAP-208ENST00000539506 YIPF3Q9GZM5 350 aa13.42□□□□□ -0.26
SFSWAP-208ENST00000539506 DENND3A2RUS2 1198 aa13.42□□□□□ -0.26
SFSWAP-208ENST00000539506 MAPK13O15264 365 aa13.42□□□□□ -0.26
SFSWAP-208ENST00000539506 SORBS3O60504 671 aa13.42□□□□□ -0.26
SFSWAP-208ENST00000539506 DNAJC8O75937 253 aaPredicted RBP13.42□□□□□ -0.26
SFSWAP-208ENST00000539506 WNT7BP56706 349 aa13.42□□□□□ -0.26
SFSWAP-208ENST00000539506 CETN1Q12798 172 aa13.42□□□□□ -0.26
SFSWAP-208ENST00000539506 CNGA2Q16280 664 aa13.42□□□□□ -0.26
SFSWAP-208ENST00000539506 MAP4K3Q8IVH8 894 aa13.42□□□□□ -0.26
SFSWAP-208ENST00000539506 SPOCK2Q92563 424 aa13.42□□□□□ -0.26
SFSWAP-208ENST00000539506 ARHGEF2Q92974 986 aaKnown RBP13.42□□□□□ -0.26
SFSWAP-208ENST00000539506 CAMKK2Q96RR4 588 aa13.42□□□□□ -0.26
SFSWAP-208ENST00000539506 NUP85Q9BW27 656 aa13.42□□□□□ -0.26
SFSWAP-208ENST00000539506 ZNFX1Q9P2E3 1918 aaKnown RBP13.41□□□□□ -0.26
SFSWAP-208ENST00000539506 PMM2O15305 246 aa13.41□□□□□ -0.26
SFSWAP-208ENST00000539506 GJC1P36383 396 aa13.41□□□□□ -0.26
SFSWAP-208ENST00000539506 LLGL2Q6P1M3 1020 aa13.41□□□□□ -0.26
SFSWAP-208ENST00000539506 TAS1R3Q7RTX0 852 aa13.41□□□□□ -0.26
SFSWAP-208ENST00000539506 PIGWQ7Z7B1 504 aa13.41□□□□□ -0.26
SFSWAP-208ENST00000539506 CYP4X1Q8N118 509 aa13.41□□□□□ -0.26
SFSWAP-208ENST00000539506 FITM2Q8N6M3 262 aa13.41□□□□□ -0.26
SFSWAP-208ENST00000539506 ATG4CQ96DT6 458 aa13.41□□□□□ -0.26
SFSWAP-208ENST00000539506 TRIM7Q9C029 511 aa13.41□□□□□ -0.26
SFSWAP-208ENST00000539506 RPAP3Q9H6T3 665 aaPredicted RBP13.41□□□□□ -0.26
SFSWAP-208ENST00000539506 GGA2Q9UJY4 613 aa13.41□□□□□ -0.26
SFSWAP-208ENST00000539506 COQ4Q9Y3A0 265 aa13.41□□□□□ -0.26
SFSWAP-208ENST00000539506 PAEPP09466 180 aa13.41□□□□□ -0.26
SFSWAP-208ENST00000539506 NQO1P15559 274 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms