RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 KIF19Q2TAC6 998 aa15.37■□□□□ 0.05
CACNB1-206ENST00000539338 C1orf146Q5VVC0 180 aa15.37■□□□□ 0.05
CACNB1-206ENST00000539338 KCNB2Q92953 911 aa15.37■□□□□ 0.05
CACNB1-206ENST00000539338 CAPNS2Q96L46 248 aa15.37■□□□□ 0.05
CACNB1-206ENST00000539338 RAB23Q9ULC3 237 aa15.37■□□□□ 0.05
CACNB1-206ENST00000539338 ADAMTS13Q76LX8 1427 aa15.37■□□□□ 0.05
CACNB1-206ENST00000539338 CFAP69A5D8W1 941 aa15.37■□□□□ 0.05
CACNB1-206ENST00000539338 SPDYE2BA6NHP3 402 aa15.37■□□□□ 0.05
CACNB1-206ENST00000539338 PDHA1P08559 390 aa15.37■□□□□ 0.05
CACNB1-206ENST00000539338 SPDYE6P0CI01 402 aa15.37■□□□□ 0.05
CACNB1-206ENST00000539338 KLRC1P26715 233 aa15.37■□□□□ 0.05
CACNB1-206ENST00000539338 ESRRGP62508 458 aa15.37■□□□□ 0.05
CACNB1-206ENST00000539338 YWHAHQ04917 246 aaPredicted RBP15.37■□□□□ 0.05
CACNB1-206ENST00000539338 TROAPQ12815 778 aa15.37■□□□□ 0.05
CACNB1-206ENST00000539338 DUOXA2Q1HG44 320 aa15.37■□□□□ 0.05
CACNB1-206ENST00000539338 HABP4Q5JVS0 413 aaKnown RBP15.37■□□□□ 0.05
CACNB1-206ENST00000539338 ATL2Q8NHH9 583 aa15.37■□□□□ 0.05
CACNB1-206ENST00000539338 SPATA33Q96N06 139 aa15.37■□□□□ 0.05
CACNB1-206ENST00000539338 EHD2Q9NZN4 543 aa15.37■□□□□ 0.05
CACNB1-206ENST00000539338 GOLGA8RI6L899 631 aa15.36■□□□□ 0.05
CACNB1-206ENST00000539338 EEF1B2P24534 225 aaKnown RBP15.36■□□□□ 0.05
CACNB1-206ENST00000539338 KLRK1P26718 216 aa15.36■□□□□ 0.05
CACNB1-206ENST00000539338 CIITAP33076 1130 aa15.36■□□□□ 0.05
CACNB1-206ENST00000539338 HSPA9P38646 679 aaKnown RBP15.36■□□□□ 0.05
CACNB1-206ENST00000539338 COPS2P61201 443 aa15.36■□□□□ 0.05
CACNB1-206ENST00000539338 AP1B1Q10567 949 aa15.36■□□□□ 0.05
CACNB1-206ENST00000539338 LONRF1Q17RB8 773 aa15.36■□□□□ 0.05
CACNB1-206ENST00000539338 TRMT10CQ7L0Y3 403 aaKnown RBP15.36■□□□□ 0.05
CACNB1-206ENST00000539338 PARP9Q8IXQ6 854 aa15.36■□□□□ 0.05
CACNB1-206ENST00000539338 THEM5Q8N1Q8 247 aa15.36■□□□□ 0.05
CACNB1-206ENST00000539338 BEST2Q8NFU1 509 aa15.36■□□□□ 0.05
CACNB1-206ENST00000539338 DHX38Q92620 1227 aaKnown RBP15.36■□□□□ 0.05
CACNB1-206ENST00000539338 JPH1Q9HDC5 661 aaPredicted RBP15.36■□□□□ 0.05
CACNB1-206ENST00000539338 PRMT2P55345 433 aa15.36■□□□□ 0.05
CACNB1-206ENST00000539338 LCA5Q86VQ0 697 aa15.36■□□□□ 0.05
CACNB1-206ENST00000539338 ZNF473Q8WTR7 871 aaKnown RBP15.36■□□□□ 0.05
CACNB1-206ENST00000539338 RUBCNQ92622 972 aa15.36■□□□□ 0.05
CACNB1-206ENST00000539338 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.36■□□□□ 0.05
CACNB1-206ENST00000539338 TMEM143Q96AN5 459 aa15.36■□□□□ 0.05
CACNB1-206ENST00000539338 MAP3K14Q99558 947 aa15.36■□□□□ 0.05
CACNB1-206ENST00000539338 EPN3Q9H201 632 aa15.36■□□□□ 0.05
CACNB1-206ENST00000539338 GTSE1Q9NYZ3 720 aa15.36■□□□□ 0.05
CACNB1-206ENST00000539338 DBR1Q9UK59 544 aaKnown RBP15.36■□□□□ 0.05
CACNB1-206ENST00000539338 PRR12Q9ULL5 1215 aa15.36■□□□□ 0.05
CACNB1-206ENST00000539338 DIAPH2O60879 1101 aa15.36■□□□□ 0.05
CACNB1-206ENST00000539338 PHF2O75151 1096 aa15.36■□□□□ 0.05
CACNB1-206ENST00000539338 CDR2Q01850 454 aa15.36■□□□□ 0.05
CACNB1-206ENST00000539338 ITPK1Q13572 414 aa15.36■□□□□ 0.05
CACNB1-206ENST00000539338 MTMR2Q13614 643 aa15.36■□□□□ 0.05
CACNB1-206ENST00000539338 SRLQ86TD4 932 aa15.36■□□□□ 0.05
CACNB1-206ENST00000539338 CCNYL1Q8N7R7 359 aa15.36■□□□□ 0.05
CACNB1-206ENST00000539338 RNF149Q8NC42 400 aa15.36■□□□□ 0.05
CACNB1-206ENST00000539338 CDC26Q8NHZ8 85 aa15.36■□□□□ 0.05
CACNB1-206ENST00000539338 NCAPGQ9BPX3 1015 aa15.36■□□□□ 0.05
CACNB1-206ENST00000539338 FSD1LQ9BXM9 530 aa15.36■□□□□ 0.05
CACNB1-206ENST00000539338 AP5Z1O43299 807 aa15.36■□□□□ 0.05
CACNB1-206ENST00000539338 ATMINO43313 823 aaPredicted RBP15.36■□□□□ 0.05
CACNB1-206ENST00000539338 PPFIA2O75334 1257 aa15.36■□□□□ 0.05
CACNB1-206ENST00000539338 LMNAP02545 664 aaKnown RBP15.36■□□□□ 0.05
CACNB1-206ENST00000539338 CHN1P15882 459 aa15.36■□□□□ 0.05
CACNB1-206ENST00000539338 PHEXP78562 749 aa15.36■□□□□ 0.05
CACNB1-206ENST00000539338 NME3Q13232 169 aa15.36■□□□□ 0.05
CACNB1-206ENST00000539338 VEPH1Q14D04 833 aa15.36■□□□□ 0.05
CACNB1-206ENST00000539338 EDRF1Q3B7T1 1238 aa15.36■□□□□ 0.05
CACNB1-206ENST00000539338 NUDCD3Q8IVD9 361 aa15.36■□□□□ 0.05
CACNB1-206ENST00000539338 CCT8L2Q96SF2 557 aa15.36■□□□□ 0.05
CACNB1-206ENST00000539338 FAM118BQ9BPY3 351 aa15.36■□□□□ 0.05
CACNB1-206ENST00000539338 FAM167BQ9BTA0 163 aa15.36■□□□□ 0.05
CACNB1-206ENST00000539338 CELF4Q9BZC1 486 aaKnown RBP15.36■□□□□ 0.05
CACNB1-206ENST00000539338 MAD2L2Q9UI95 211 aa15.36■□□□□ 0.05
CACNB1-206ENST00000539338 PHF20L1A8MW92 1017 aa15.36■□□□□ 0.05
CACNB1-206ENST00000539338 ERVK-24P63145 666 aa15.36■□□□□ 0.05
CACNB1-206ENST00000539338 BYSLQ13895 437 aaKnown RBP15.36■□□□□ 0.05
CACNB1-206ENST00000539338 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.36■□□□□ 0.05
CACNB1-206ENST00000539338 GJB7Q6PEY0 223 aa15.36■□□□□ 0.05
CACNB1-206ENST00000539338 RFX8Q6ZV50 586 aa15.36■□□□□ 0.05
CACNB1-206ENST00000539338 CXorf38Q8TB03 319 aa15.36■□□□□ 0.05
CACNB1-206ENST00000539338 CCDC138Q96M89 665 aa15.36■□□□□ 0.05
CACNB1-206ENST00000539338 FAM161BQ96MY7 647 aa15.36■□□□□ 0.05
CACNB1-206ENST00000539338 TMEM117Q9H0C3 514 aa15.36■□□□□ 0.05
CACNB1-206ENST00000539338 A0A1W2PQJ5 194 aa15.35■□□□□ 0.05
CACNB1-206ENST00000539338 PFDN1O60925 122 aa15.35■□□□□ 0.05
CACNB1-206ENST00000539338 TAC1P20366 129 aa15.35■□□□□ 0.05
CACNB1-206ENST00000539338 SNRNP35Q16560 246 aaKnown RBP15.35■□□□□ 0.05
CACNB1-206ENST00000539338 HHIPL2Q6UWX4 724 aa15.35■□□□□ 0.05
CACNB1-206ENST00000539338 SCN4BQ8IWT1 228 aa15.35■□□□□ 0.05
CACNB1-206ENST00000539338 C9orf72Q96LT7 481 aa15.35■□□□□ 0.05
CACNB1-206ENST00000539338 CHORDC1Q9UHD1 332 aaPredicted RBP15.35■□□□□ 0.05
CACNB1-206ENST00000539338 EIF3HO15372 352 aaKnown RBP eCLIP15.35■□□□□ 0.05
CACNB1-206ENST00000539338 HIF1AQ16665 826 aa15.35■□□□□ 0.05
CACNB1-206ENST00000539338 PGBD4Q96DM1 585 aa15.35■□□□□ 0.05
CACNB1-206ENST00000539338 GLIS2Q9BZE0 524 aaPredicted RBP15.35■□□□□ 0.05
CACNB1-206ENST00000539338 STARD7Q9NQZ5 370 aa15.35■□□□□ 0.05
CACNB1-206ENST00000539338 TMEM39AQ9NV64 488 aa15.35■□□□□ 0.05
CACNB1-206ENST00000539338 NYAP2Q9P242 653 aa15.35■□□□□ 0.05
CACNB1-206ENST00000539338 ADGRB2O60241 1585 aa15.35■□□□□ 0.05
CACNB1-206ENST00000539338 KPNA6O60684 536 aa15.35■□□□□ 0.05
CACNB1-206ENST00000539338 PAMP19021 973 aa15.35■□□□□ 0.05
CACNB1-206ENST00000539338 P3H1Q32P28 736 aa15.35■□□□□ 0.05
CACNB1-206ENST00000539338 WDR72Q3MJ13 1102 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms