RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 DNM1LO00429 736 aa9.55□□□□□ -0.88
DDB1-213ENST00000539332 ZNF263O14978 683 aa9.55□□□□□ -0.88
DDB1-213ENST00000539332 FANCGO15287 622 aa9.55□□□□□ -0.88
DDB1-213ENST00000539332 SASH3O75995 380 aa9.55□□□□□ -0.88
DDB1-213ENST00000539332 LDHAP00338 332 aaKnown RBP9.55□□□□□ -0.88
DDB1-213ENST00000539332 PRKCBP05771 671 aa9.55□□□□□ -0.88
DDB1-213ENST00000539332 PLEKP08567 350 aaPredicted RBP9.55□□□□□ -0.88
DDB1-213ENST00000539332 EIF4A3P38919 411 aaKnown RBP9.55□□□□□ -0.88
DDB1-213ENST00000539332 NOP2P46087 812 aaKnown RBP9.55□□□□□ -0.88
DDB1-213ENST00000539332 LMAN1P49257 510 aa9.55□□□□□ -0.88
DDB1-213ENST00000539332 MXI1P50539 228 aa9.55□□□□□ -0.88
DDB1-213ENST00000539332 ITGA7Q13683 1181 aa9.55□□□□□ -0.88
DDB1-213ENST00000539332 PSMD6Q15008 389 aa9.55□□□□□ -0.88
DDB1-213ENST00000539332 HSP90B2PQ58FF3 399 aa9.55□□□□□ -0.88
DDB1-213ENST00000539332 ICE2Q659A1 982 aa9.55□□□□□ -0.88
DDB1-213ENST00000539332 IQCEQ6IPM2 695 aa9.55□□□□□ -0.88
DDB1-213ENST00000539332 GDF6Q6KF10 455 aaPredicted RBP9.55□□□□□ -0.88
DDB1-213ENST00000539332 C15orf39Q6ZRI6 1047 aa9.55□□□□□ -0.88
DDB1-213ENST00000539332 USP37Q86T82 979 aa9.55□□□□□ -0.88
DDB1-213ENST00000539332 ZBTB8OSQ8IWT0 167 aa9.55□□□□□ -0.88
DDB1-213ENST00000539332 RDH13Q8NBN7 331 aa9.55□□□□□ -0.88
DDB1-213ENST00000539332 EHBP1Q8NDI1 1231 aa9.55□□□□□ -0.88
DDB1-213ENST00000539332 PPM1EQ8WY54 764 aa9.55□□□□□ -0.88
DDB1-213ENST00000539332 VTI1AQ96AJ9 217 aa9.55□□□□□ -0.88
DDB1-213ENST00000539332 ARMC5Q96C12 935 aa9.55□□□□□ -0.88
DDB1-213ENST00000539332 ZNF668Q96K58 619 aaPredicted RBP9.55□□□□□ -0.88
DDB1-213ENST00000539332 ACO2Q99798 780 aaKnown RBP9.55□□□□□ -0.88
DDB1-213ENST00000539332 TARS2Q9BW92 718 aaKnown RBP9.55□□□□□ -0.88
DDB1-213ENST00000539332 MRPL4Q9BYD3 311 aaKnown RBP9.55□□□□□ -0.88
DDB1-213ENST00000539332 FAM49AQ9H0Q0 323 aaPredicted RBP9.55□□□□□ -0.88
DDB1-213ENST00000539332 IFT122Q9HBG6 1241 aa9.55□□□□□ -0.88
DDB1-213ENST00000539332 TMEM8AQ9HCN3 771 aa9.55□□□□□ -0.88
DDB1-213ENST00000539332 MED4Q9NPJ6 270 aa9.55□□□□□ -0.88
DDB1-213ENST00000539332 PLSCR2Q9NRY7 297 aa9.55□□□□□ -0.88
DDB1-213ENST00000539332 AGO2Q9UKV8 859 aaKnown RBP9.55□□□□□ -0.88
DDB1-213ENST00000539332 OGDHLQ9ULD0 1010 aa9.55□□□□□ -0.88
DDB1-213ENST00000539332 PHF24Q9UPV7 400 aa9.55□□□□□ -0.88
DDB1-213ENST00000539332 A0A0U1RQJ8 604 aa9.54□□□□□ -0.88
DDB1-213ENST00000539332 ZNF233A6NK53 670 aa9.54□□□□□ -0.88
DDB1-213ENST00000539332 KBTBD13C9JR72 458 aa9.54□□□□□ -0.88
DDB1-213ENST00000539332 ACKR2O00590 384 aa9.54□□□□□ -0.88
DDB1-213ENST00000539332 TOM1L1O75674 476 aa9.54□□□□□ -0.88
DDB1-213ENST00000539332 SEC31AO94979 1220 aaKnown RBP9.54□□□□□ -0.88
DDB1-213ENST00000539332 MCM3P25205 808 aa9.54□□□□□ -0.88
DDB1-213ENST00000539332 PHKA2P46019 1235 aa9.54□□□□□ -0.88
DDB1-213ENST00000539332 GPC3P51654 580 aa9.54□□□□□ -0.88
DDB1-213ENST00000539332 KIF11P52732 1056 aa9.54□□□□□ -0.88
DDB1-213ENST00000539332 NLRP11P59045 1033 aaKnown RBP9.54□□□□□ -0.88
DDB1-213ENST00000539332 KRT83P78385 493 aa9.54□□□□□ -0.88
DDB1-213ENST00000539332 MBTD1Q05BQ5 628 aa9.54□□□□□ -0.88
DDB1-213ENST00000539332 MCL1Q07820 350 aa9.54□□□□□ -0.88
DDB1-213ENST00000539332 MAPK6Q16659 721 aa9.54□□□□□ -0.88
DDB1-213ENST00000539332 TAF2Q6P1X5 1199 aa9.54□□□□□ -0.88
DDB1-213ENST00000539332 TSHZ1Q6ZSZ6 1077 aa9.54□□□□□ -0.88
DDB1-213ENST00000539332 SRGAP1Q7Z6B7 1085 aa9.54□□□□□ -0.88
DDB1-213ENST00000539332 FMNL3Q8IVF7 1028 aa9.54□□□□□ -0.88
DDB1-213ENST00000539332 MSANTD4Q8NCY6 345 aa9.54□□□□□ -0.88
DDB1-213ENST00000539332 OLIG1Q8TAK6 271 aa9.54□□□□□ -0.88
DDB1-213ENST00000539332 FAM71BQ8TC56 605 aa9.54□□□□□ -0.88
DDB1-213ENST00000539332 DNAJB3Q8WWF6 145 aa9.54□□□□□ -0.88
DDB1-213ENST00000539332 ATRIPQ8WXE1 791 aa9.54□□□□□ -0.88
DDB1-213ENST00000539332 ZBTB45Q96K62 511 aaPredicted RBP9.54□□□□□ -0.88
DDB1-213ENST00000539332 PPP1R16BQ96T49 567 aa9.54□□□□□ -0.88
DDB1-213ENST00000539332 GPR88Q9GZN0 384 aa9.54□□□□□ -0.88
DDB1-213ENST00000539332 PTPRHQ9HD43 1115 aa9.54□□□□□ -0.88
DDB1-213ENST00000539332 MYO1AQ9UBC5 1043 aa9.54□□□□□ -0.88
DDB1-213ENST00000539332 NENFQ9UMX5 172 aa9.54□□□□□ -0.88
DDB1-213ENST00000539332 BZW2Q9Y6E2 419 aaKnown RBP9.54□□□□□ -0.88
DDB1-213ENST00000539332 A0A087WZ62 844 aa9.53□□□□□ -0.88
DDB1-213ENST00000539332 TTLL13PA6NNM8 815 aa9.53□□□□□ -0.88
DDB1-213ENST00000539332 F8VZ95 297 aa9.53□□□□□ -0.88
DDB1-213ENST00000539332 INO80B-WBP1J3KQ70 363 aa9.53□□□□□ -0.88
DDB1-213ENST00000539332 IQCF3P0C7M6 154 aa9.53□□□□□ -0.88
DDB1-213ENST00000539332 GCLMP48507 274 aa9.53□□□□□ -0.88
DDB1-213ENST00000539332 VAV2P52735 878 aa9.53□□□□□ -0.88
DDB1-213ENST00000539332 CDC42EP1Q00587 391 aa9.53□□□□□ -0.88
DDB1-213ENST00000539332 TMEM62Q0P6H9 643 aa9.53□□□□□ -0.88
DDB1-213ENST00000539332 CETN1Q12798 172 aa9.53□□□□□ -0.88
DDB1-213ENST00000539332 RAPGEF1Q13905 1077 aa9.53□□□□□ -0.88
DDB1-213ENST00000539332 ASIC2Q16515 512 aa9.53□□□□□ -0.88
DDB1-213ENST00000539332 AMHR2Q16671 573 aa9.53□□□□□ -0.88
DDB1-213ENST00000539332 KIZQ2M2Z5 673 aa9.53□□□□□ -0.88
DDB1-213ENST00000539332 TTC31Q49AM3 519 aaPredicted RBP9.53□□□□□ -0.88
DDB1-213ENST00000539332 KRT39Q6A163 491 aa9.53□□□□□ -0.88
DDB1-213ENST00000539332 SERINC5Q86VE9 423 aa9.53□□□□□ -0.88
DDB1-213ENST00000539332 ZNF410Q86VK4 478 aa9.53□□□□□ -0.88
DDB1-213ENST00000539332 BRSK2Q8IWQ3 736 aa9.53□□□□□ -0.88
DDB1-213ENST00000539332 GPATCH11Q8N954 259 aa9.53□□□□□ -0.88
DDB1-213ENST00000539332 NLRP7Q8WX94 980 aa9.53□□□□□ -0.88
DDB1-213ENST00000539332 CCDC42Q96M95 316 aa9.53□□□□□ -0.88
DDB1-213ENST00000539332 FDXACB1Q9BRP7 624 aaPredicted RBP9.53□□□□□ -0.88
DDB1-213ENST00000539332 FAM213AQ9BRX8 229 aa9.53□□□□□ -0.88
DDB1-213ENST00000539332 SYT11Q9BT88 431 aa9.53□□□□□ -0.88
DDB1-213ENST00000539332 MSTO1Q9BUK6 570 aa9.53□□□□□ -0.88
DDB1-213ENST00000539332 STK33Q9BYT3 514 aa9.53□□□□□ -0.88
DDB1-213ENST00000539332 INO80BQ9C086 356 aaPredicted RBP9.53□□□□□ -0.88
DDB1-213ENST00000539332 CRISPLD2Q9H0B8 497 aa9.53□□□□□ -0.88
DDB1-213ENST00000539332 HAUS4Q9H6D7 363 aa9.53□□□□□ -0.88
DDB1-213ENST00000539332 MINDY3Q9H8M7 445 aa9.53□□□□□ -0.88
DDB1-213ENST00000539332 STARD7Q9NQZ5 370 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms