RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 CPA5Q8WXQ8 436 aa15.19■□□□□ 0.02
ACTN1-205ENST00000538545 LRRC1Q9BTT6 524 aa15.19■□□□□ 0.02
ACTN1-205ENST00000538545 CDT1Q9H211 546 aa15.19■□□□□ 0.02
ACTN1-205ENST00000538545 RBM47A0AV96 593 aaKnown RBP15.18■□□□□ 0.02
ACTN1-205ENST00000538545 UNCXA6NJT0 531 aa15.18■□□□□ 0.02
ACTN1-205ENST00000538545 RRP9O43818 475 aaKnown RBP15.18■□□□□ 0.02
ACTN1-205ENST00000538545 PPFIA4O75335 1185 aa15.18■□□□□ 0.02
ACTN1-205ENST00000538545 TBC1D8O95759 1140 aa15.18■□□□□ 0.02
ACTN1-205ENST00000538545 MYBL2P10244 700 aa15.18■□□□□ 0.02
ACTN1-205ENST00000538545 EFNA5P52803 228 aa15.18■□□□□ 0.02
ACTN1-205ENST00000538545 NOP14P78316 857 aaKnown RBP15.18■□□□□ 0.02
ACTN1-205ENST00000538545 ORC1Q13415 861 aa15.18■□□□□ 0.02
ACTN1-205ENST00000538545 DAB2IPQ5VWQ8 1189 aa15.18■□□□□ 0.02
ACTN1-205ENST00000538545 RGMBQ6NW40 437 aa15.18■□□□□ 0.02
ACTN1-205ENST00000538545 CC2D1AQ6P1N0 951 aaPredicted RBP15.18■□□□□ 0.02
ACTN1-205ENST00000538545 ADAT2Q7Z6V5 191 aaKnown RBP15.18■□□□□ 0.02
ACTN1-205ENST00000538545 DDX1Q92499 740 aaKnown RBP15.18■□□□□ 0.02
ACTN1-205ENST00000538545 CGRRF1Q99675 332 aa15.18■□□□□ 0.02
ACTN1-205ENST00000538545 TRIM7Q9C029 511 aa15.18■□□□□ 0.02
ACTN1-205ENST00000538545 FZD8Q9H461 694 aa15.18■□□□□ 0.02
ACTN1-205ENST00000538545 DMGDHQ9UI17 866 aaKnown RBP15.18■□□□□ 0.02
ACTN1-205ENST00000538545 ZSCAN5CA6NGD5 496 aaPredicted RBP15.18■□□□□ 0.02
ACTN1-205ENST00000538545 ACKR2O00590 384 aa15.18■□□□□ 0.02
ACTN1-205ENST00000538545 CLDN10P78369 228 aa15.18■□□□□ 0.02
ACTN1-205ENST00000538545 CRHR2Q13324 411 aa15.18■□□□□ 0.02
ACTN1-205ENST00000538545 ZPBP2Q6X784 338 aa15.18■□□□□ 0.02
ACTN1-205ENST00000538545 USP37Q86T82 979 aa15.18■□□□□ 0.02
ACTN1-205ENST00000538545 BRSK2Q8IWQ3 736 aa15.18■□□□□ 0.02
ACTN1-205ENST00000538545 KIAA1586Q9HCI6 787 aa15.18■□□□□ 0.02
ACTN1-205ENST00000538545 ABCB6Q9NP58 842 aa15.18■□□□□ 0.02
ACTN1-205ENST00000538545 OGTO15294 1046 aa15.17■□□□□ 0.02
ACTN1-205ENST00000538545 PMM2O15305 246 aa15.17■□□□□ 0.02
ACTN1-205ENST00000538545 WEE2P0C1S8 567 aa15.17■□□□□ 0.02
ACTN1-205ENST00000538545 SLC26A2P50443 739 aa15.17■□□□□ 0.02
ACTN1-205ENST00000538545 PDE6CP51160 858 aa15.17■□□□□ 0.02
ACTN1-205ENST00000538545 MAP2K5Q13163 448 aa15.17■□□□□ 0.02
ACTN1-205ENST00000538545 WDR44Q5JSH3 913 aa15.17■□□□□ 0.02
ACTN1-205ENST00000538545 MORN1Q5T089 497 aa15.17■□□□□ 0.02
ACTN1-205ENST00000538545 TMCO3Q6UWJ1 677 aa15.17■□□□□ 0.02
ACTN1-205ENST00000538545 PEX26Q7Z412 305 aa15.17■□□□□ 0.02
ACTN1-205ENST00000538545 IFNL1Q8IU54 200 aa15.17■□□□□ 0.02
ACTN1-205ENST00000538545 KIAA0319LQ8IZA0 1049 aa15.17■□□□□ 0.02
ACTN1-205ENST00000538545 PTPRHQ9HD43 1115 aa15.17■□□□□ 0.02
ACTN1-205ENST00000538545 CTTNBP2NLQ9P2B4 639 aa15.17■□□□□ 0.02
ACTN1-205ENST00000538545 CPSF3Q9UKF6 684 aaKnown RBP15.17■□□□□ 0.02
ACTN1-205ENST00000538545 ABT1Q9ULW3 272 aaKnown RBP15.17■□□□□ 0.02
ACTN1-205ENST00000538545 TRPM7Q96QT4 1865 aa15.17■□□□□ 0.02
ACTN1-205ENST00000538545 KIF4AO95239 1232 aa15.17■□□□□ 0.02
ACTN1-205ENST00000538545 KRT19P08727 400 aa15.17■□□□□ 0.02
ACTN1-205ENST00000538545 HOXC6P09630 235 aa15.17■□□□□ 0.02
ACTN1-205ENST00000538545 CCDC172P0C7W6 258 aa15.17■□□□□ 0.02
ACTN1-205ENST00000538545 ARF4P18085 180 aaPredicted RBP15.17■□□□□ 0.02
ACTN1-205ENST00000538545 RFX1P22670 979 aa15.17■□□□□ 0.02
ACTN1-205ENST00000538545 MARCKSL1P49006 195 aa15.17■□□□□ 0.02
ACTN1-205ENST00000538545 CAP1Q01518 475 aa15.17■□□□□ 0.02
ACTN1-205ENST00000538545 ZNF211Q13398 564 aaPredicted RBP15.17■□□□□ 0.02
ACTN1-205ENST00000538545 TUBB2AQ13885 445 aa15.17■□□□□ 0.02
ACTN1-205ENST00000538545 RPS6KA1Q15418 735 aa15.17■□□□□ 0.02
ACTN1-205ENST00000538545 C10orf76Q5T2E6 689 aa15.17■□□□□ 0.02
ACTN1-205ENST00000538545 NAA35Q5VZE5 725 aa15.17■□□□□ 0.02
ACTN1-205ENST00000538545 MPZL3Q6UWV2 235 aa15.17■□□□□ 0.02
ACTN1-205ENST00000538545 LMBR1Q8WVP7 490 aa15.17■□□□□ 0.02
ACTN1-205ENST00000538545 TUBB2BQ9BVA1 445 aa15.17■□□□□ 0.02
ACTN1-205ENST00000538545 AP1M1Q9BXS5 423 aa15.17■□□□□ 0.02
ACTN1-205ENST00000538545 PCDHB4Q9Y5E5 795 aa15.17■□□□□ 0.02
ACTN1-205ENST00000538545 GJB6O95452 261 aa15.16■□□□□ 0.02
ACTN1-205ENST00000538545 LDHAP00338 332 aaKnown RBP15.16■□□□□ 0.02
ACTN1-205ENST00000538545 NFICP08651 508 aa15.16■□□□□ 0.02
ACTN1-205ENST00000538545 TMEM253P0C7T8 217 aa15.16■□□□□ 0.02
ACTN1-205ENST00000538545 TCP1P17987 556 aaKnown RBP15.16■□□□□ 0.02
ACTN1-205ENST00000538545 GTF2H1P32780 548 aa15.16■□□□□ 0.02
ACTN1-205ENST00000538545 RAP1GAPP47736 663 aa15.16■□□□□ 0.02
ACTN1-205ENST00000538545 MCL1Q07820 350 aa15.16■□□□□ 0.02
ACTN1-205ENST00000538545 AMHR2Q16671 573 aa15.16■□□□□ 0.02
ACTN1-205ENST00000538545 ZNF467Q7Z7K2 595 aaPredicted RBP15.16■□□□□ 0.02
ACTN1-205ENST00000538545 RFFLQ8WZ73 363 aa15.16■□□□□ 0.02
ACTN1-205ENST00000538545 HES2Q9Y543 173 aa15.16■□□□□ 0.02
ACTN1-205ENST00000538545 ANK1P16157 1881 aa15.16■□□□□ 0.02
ACTN1-205ENST00000538545 ANKRD62A6NC57 917 aa15.16■□□□□ 0.02
ACTN1-205ENST00000538545 SLC15A5A6NIM6 579 aa15.16■□□□□ 0.02
ACTN1-205ENST00000538545 CEP104O60308 925 aa15.16■□□□□ 0.02
ACTN1-205ENST00000538545 MYCNP04198 464 aaPredicted RBP15.16■□□□□ 0.02
ACTN1-205ENST00000538545 MCCD1P59942 119 aaPredicted RBP15.16■□□□□ 0.02
ACTN1-205ENST00000538545 CUL2Q13617 745 aa15.16■□□□□ 0.02
ACTN1-205ENST00000538545 DGKDQ16760 1214 aa15.16■□□□□ 0.02
ACTN1-205ENST00000538545 TLK2Q86UE8 772 aa15.16■□□□□ 0.02
ACTN1-205ENST00000538545 NT5DC3Q86UY8 548 aa15.16■□□□□ 0.02
ACTN1-205ENST00000538545 TXLNBQ8N3L3 684 aa15.16■□□□□ 0.02
ACTN1-205ENST00000538545 KAT2BQ92831 832 aa15.16■□□□□ 0.02
ACTN1-205ENST00000538545 CYFIP2Q96F07 1278 aa15.16■□□□□ 0.02
ACTN1-205ENST00000538545 CCDC94Q9BW85 323 aaPredicted RBP15.16■□□□□ 0.02
ACTN1-205ENST00000538545 NXF1Q9UBU9 619 aaKnown RBP15.16■□□□□ 0.02
ACTN1-205ENST00000538545 KCNG1Q9UIX4 513 aa15.16■□□□□ 0.02
ACTN1-205ENST00000538545 POLIQ9UNA4 740 aa15.16■□□□□ 0.02
ACTN1-205ENST00000538545 ESYT3A0FGR9 886 aa15.16■□□□□ 0.02
ACTN1-205ENST00000538545 ZNF865P0CJ78 1059 aaPredicted RBP15.16■□□□□ 0.02
ACTN1-205ENST00000538545 ACO1P21399 889 aaKnown RBP15.16■□□□□ 0.02
ACTN1-205ENST00000538545 PROZP22891 400 aa15.16■□□□□ 0.02
ACTN1-205ENST00000538545 TFDP1Q14186 410 aa15.16■□□□□ 0.02
ACTN1-205ENST00000538545 MESDQ14696 234 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms