RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 TNFAIP8O95379 198 aa9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 KRT13P13646 458 aa9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 MXI1P50539 228 aa9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 NPEPPSP55786 919 aa9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 CALCOCO2Q13137 446 aa9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 PDK4Q16654 411 aa9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 MYLK3Q32MK0 819 aa9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 CYFIP1Q7L576 1253 aa9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 CCDC25Q86WR0 208 aa9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 TMPRSS6Q8IU80 811 aa9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 ICA1LQ8NDH6 482 aa9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 C7orf43Q8WVR3 580 aa9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 OSBPL8Q9BZF1 889 aa9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 UNKQ9C0B0 810 aaKnown RBP9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 TANGO6Q9C0B7 1094 aa9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 GRIP2Q9C0E4 1043 aa9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 SENP6Q9GZR1 1112 aaPredicted RBP9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 CCDC68Q9H2F9 335 aa9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 PSTPIP2Q9H939 334 aa9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 VTA1Q9NP79 307 aa9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 RSL24D1Q9UHA3 163 aaKnown RBP9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 NWD2Q9ULI1 1742 aa9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 PTPRUQ92729 1446 aa9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 A0A0A6YYK5 440 aaPredicted RBP9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 SOBPA7XYQ1 873 aa9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 ESRRBO95718 433 aa9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 PABPC1P11940 636 aaKnown RBP9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 RPL21P46778 160 aaKnown RBP9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 RFX5P48382 616 aaPredicted RBP9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 TRAPPC10P48553 1259 aa9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 LRRC63Q05C16 580 aa9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 PDE4DQ08499 809 aa9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 NR1H3Q13133 447 aa9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 E2F2Q14209 437 aa9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 ASIC2Q16515 512 aa9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 RWDD4Q6NW29 188 aaKnown RBP9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 POTEHQ6S545 545 aa9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 NT5DC3Q86UY8 548 aa9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 FAM172AQ8WUF8 416 aa9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 BORCS5Q969J3 196 aa9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 CCDC127Q96BQ5 260 aa9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 NUDT16Q96DE0 195 aaKnown RBP9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 TTC25Q96NG3 672 aa9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 UIMC1Q96RL1 719 aa9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 NAPBQ9H115 298 aa9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 CDC42EP4Q9H3Q1 356 aaKnown RBP9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 GOLPH3Q9H4A6 298 aa9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 MAGEF1Q9HAY2 307 aa9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 PIH1D3Q9NQM4 214 aaKnown RBP9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 ARL8BQ9NVJ2 186 aa9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 LGALS13Q9UHV8 139 aa9.03□□□□□ -0.96
SRGAP1-202ENST00000537556 ATP8B3O60423 1300 aa9.02□□□□□ -0.96
SRGAP1-202ENST00000537556 TMEM114B3SHH9 223 aa9.02□□□□□ -0.97
SRGAP1-202ENST00000537556 ACSL3O95573 720 aa9.02□□□□□ -0.97
SRGAP1-202ENST00000537556 RARBP10826 455 aa9.02□□□□□ -0.97
SRGAP1-202ENST00000537556 CDH2P19022 906 aaPredicted RBP9.02□□□□□ -0.97
SRGAP1-202ENST00000537556 GNA11P29992 359 aa9.02□□□□□ -0.97
SRGAP1-202ENST00000537556 SLC18A1P54219 525 aa9.02□□□□□ -0.97
SRGAP1-202ENST00000537556 ZBTB16Q05516 673 aa9.02□□□□□ -0.97
SRGAP1-202ENST00000537556 RAPGEF1Q13905 1077 aa9.02□□□□□ -0.97
SRGAP1-202ENST00000537556 CNNM4Q6P4Q7 775 aa9.02□□□□□ -0.97
SRGAP1-202ENST00000537556 DCDC5Q6ZRR9 648 aa9.02□□□□□ -0.97
SRGAP1-202ENST00000537556 CAPN12Q6ZSI9 719 aa9.02□□□□□ -0.97
SRGAP1-202ENST00000537556 RAPH1Q70E73 1250 aa9.02□□□□□ -0.97
SRGAP1-202ENST00000537556 DHDDSQ86SQ9 333 aa9.02□□□□□ -0.97
SRGAP1-202ENST00000537556 ANKRD13BQ86YJ7 626 aa9.02□□□□□ -0.97
SRGAP1-202ENST00000537556 MARVELD2Q8N4S9 558 aa9.02□□□□□ -0.97
SRGAP1-202ENST00000537556 SGF29Q96ES7 293 aa9.02□□□□□ -0.97
SRGAP1-202ENST00000537556 PRPF18Q99633 342 aaKnown RBP9.02□□□□□ -0.97
SRGAP1-202ENST00000537556 SLC39A3Q9BRY0 314 aa9.02□□□□□ -0.97
SRGAP1-202ENST00000537556 RNF26Q9BY78 433 aaPredicted RBP9.02□□□□□ -0.97
SRGAP1-202ENST00000537556 SLCO1B3Q9NPD5 702 aa9.02□□□□□ -0.97
SRGAP1-202ENST00000537556 ANKFY1Q9P2R3 1169 aa9.02□□□□□ -0.97
SRGAP1-202ENST00000537556 MON2Q7Z3U7 1717 aa9.02□□□□□ -0.97
SRGAP1-202ENST00000537556 FAM205CA6NFA0 338 aa9.02□□□□□ -0.97
SRGAP1-202ENST00000537556 MTRF1O75570 445 aaKnown RBP9.02□□□□□ -0.97
SRGAP1-202ENST00000537556 DGKIO75912 1065 aa9.02□□□□□ -0.97
SRGAP1-202ENST00000537556 EEF2P13639 858 aaKnown RBP9.02□□□□□ -0.97
SRGAP1-202ENST00000537556 GSSP48637 474 aa9.02□□□□□ -0.97
SRGAP1-202ENST00000537556 CSE1LP55060 971 aaKnown RBP9.02□□□□□ -0.97
SRGAP1-202ENST00000537556 WDR4P57081 412 aaKnown RBP9.02□□□□□ -0.97
SRGAP1-202ENST00000537556 DLG1Q12959 904 aa9.02□□□□□ -0.97
SRGAP1-202ENST00000537556 UBE4AQ14139 1066 aa9.02□□□□□ -0.97
SRGAP1-202ENST00000537556 COBLL1Q53SF7 1204 aa9.02□□□□□ -0.97
SRGAP1-202ENST00000537556 FAM209AQ5JX71 171 aa9.02□□□□□ -0.97
SRGAP1-202ENST00000537556 C1orf146Q5VVC0 180 aa9.02□□□□□ -0.97
SRGAP1-202ENST00000537556 RIPOR1Q6ZS17 1223 aa9.02□□□□□ -0.97
SRGAP1-202ENST00000537556 METTL25Q8N6Q8 603 aa9.02□□□□□ -0.97
SRGAP1-202ENST00000537556 ART4Q93070 314 aa9.02□□□□□ -0.97
SRGAP1-202ENST00000537556 CEP44Q9C0F1 390 aa9.02□□□□□ -0.97
SRGAP1-202ENST00000537556 KBTBD4Q9NVX7 518 aa9.02□□□□□ -0.97
SRGAP1-202ENST00000537556 TRNAU1APQ9NX07 287 aaKnown RBP9.02□□□□□ -0.97
SRGAP1-202ENST00000537556 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.02□□□□□ -0.97
SRGAP1-202ENST00000537556 SPEF2Q9C093 1822 aa9.02□□□□□ -0.97
SRGAP1-202ENST00000537556 PIK3C2AO00443 1686 aa9.01□□□□□ -0.97
SRGAP1-202ENST00000537556 METP08581 1390 aa9.01□□□□□ -0.97
SRGAP1-202ENST00000537556 FLT4P35916 1363 aa9.01□□□□□ -0.97
SRGAP1-202ENST00000537556 PFDN6O15212 129 aa9.01□□□□□ -0.97
SRGAP1-202ENST00000537556 GPAA1O43292 621 aa9.01□□□□□ -0.97
SRGAP1-202ENST00000537556 XPOTO43592 962 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms